RNA–Protein interactions for RNA: ENST00000477193.1

SRSF4-203, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 206 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-203ENST00000477193 CCL19Q99731 98 aa1.98□□□□□ -2.09
SRSF4-203ENST00000477193 MRPL34Q9BQ48 92 aaKnown RBP1.98□□□□□ -2.09
SRSF4-203ENST00000477193 ANKHD1Q8IWZ3 2542 aaKnown RBP1.98□□□□□ -2.09
SRSF4-203ENST00000477193 TRIOO75962 3097 aa1.98□□□□□ -2.09
SRSF4-203ENST00000477193 DMDP11532 3685 aa1.98□□□□□ -2.09
SRSF4-203ENST00000477193 WDFY4Q6ZS81 3184 aa1.98□□□□□ -2.09
SRSF4-203ENST00000477193 IGLV7-43P04211 117 aa1.97□□□□□ -2.09
SRSF4-203ENST00000477193 LINC01556Q5JQF7 62 aa1.97□□□□□ -2.09
SRSF4-203ENST00000477193 Q96NJ1 140 aa1.97□□□□□ -2.09
SRSF4-203ENST00000477193 ABCA2Q9BZC7 2435 aa1.97□□□□□ -2.09
SRSF4-203ENST00000477193 CNOT1A5YKK6 2376 aaKnown RBP1.96□□□□□ -2.09
SRSF4-203ENST00000477193 SMG1Q96Q15 3661 aaKnown RBP1.96□□□□□ -2.1
SRSF4-203ENST00000477193 PCNX1Q96RV3 2341 aa1.96□□□□□ -2.1
SRSF4-203ENST00000477193 PRUNE2Q8WUY3 3088 aa1.96□□□□□ -2.1
SRSF4-203ENST00000477193 SPART-AS1P0CW21 52 aa1.96□□□□□ -2.1
SRSF4-203ENST00000477193 FRYLO94915 3013 aa1.96□□□□□ -2.1
SRSF4-203ENST00000477193 TPRP12270 2363 aaKnown RBP1.96□□□□□ -2.1
SRSF4-203ENST00000477193 APC2O95996 2303 aa1.96□□□□□ -2.1
SRSF4-203ENST00000477193 SPINT4Q6UDR6 99 aa1.95□□□□□ -2.1
SRSF4-203ENST00000477193 CELSR3Q9NYQ7 3312 aa1.95□□□□□ -2.1
SRSF4-203ENST00000477193 BSNQ9UPA5 3926 aa1.95□□□□□ -2.1
SRSF4-203ENST00000477193 CSMD1Q96PZ7 3565 aa1.94□□□□□ -2.1
SRSF4-203ENST00000477193 SORL1Q92673 2214 aa1.94□□□□□ -2.1
SRSF4-203ENST00000477193 SPRR5A0A1B0GTR4 108 aa1.94□□□□□ -2.1
SRSF4-203ENST00000477193 K7ERS5 55 aa1.94□□□□□ -2.1
SRSF4-203ENST00000477193 LY6G6CO95867 125 aa1.94□□□□□ -2.1
SRSF4-203ENST00000477193 COL6A6A6NMZ7 2263 aa1.94□□□□□ -2.1
SRSF4-203ENST00000477193 KALRNO60229 2985 aa1.94□□□□□ -2.1
SRSF4-203ENST00000477193 ALMS1Q8TCU4 4167 aa1.94□□□□□ -2.1
SRSF4-203ENST00000477193 KMT2BQ9UMN6 2715 aaPredicted RBP1.93□□□□□ -2.1
SRSF4-203ENST00000477193 RP1L1Q8IWN7 2480 aaPredicted RBP1.93□□□□□ -2.1
SRSF4-203ENST00000477193 CACNA1HO95180 2353 aa1.92□□□□□ -2.1
SRSF4-203ENST00000477193 P0C880 135 aa1.92□□□□□ -2.1
SRSF4-203ENST00000477193 KRTAP13-1Q8IUC0 172 aa1.92□□□□□ -2.1
SRSF4-203ENST00000477193 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.92□□□□□ -2.13e-8■■■□□ 17.2
SRSF4-203ENST00000477193 TRIOBPQ9H2D6 2365 aa1.92□□□□□ -2.1
SRSF4-203ENST00000477193 PTPRZ1P23471 2315 aaPredicted RBP1.91□□□□□ -2.1
SRSF4-203ENST00000477193 PIEZO2Q9H5I5 2752 aa1.91□□□□□ -2.1
SRSF4-203ENST00000477193 A0A0G2JQZ4 141 aa1.91□□□□□ -2.1
SRSF4-203ENST00000477193 A0A1W2PNN7 141 aa1.91□□□□□ -2.1
SRSF4-203ENST00000477193 NUPR2A6NF83 97 aa1.91□□□□□ -2.1
SRSF4-203ENST00000477193 PRLHP81277 87 aa1.91□□□□□ -2.1
SRSF4-203ENST00000477193 LINC00304Q8N9R0 145 aa1.91□□□□□ -2.1
SRSF4-203ENST00000477193 MGAQ8IWI9 3026 aa1.91□□□□□ -2.1
SRSF4-203ENST00000477193 NCOR1O75376 2440 aa1.91□□□□□ -2.1
SRSF4-203ENST00000477193 DSPP15924 2871 aaKnown RBP1.9□□□□□ -2.1
SRSF4-203ENST00000477193 DMXL2Q8TDJ6 3036 aa1.9□□□□□ -2.11
SRSF4-203ENST00000477193 R4GN34 69 aa1.9□□□□□ -2.11
SRSF4-203ENST00000477193 AKAP9Q99996 3911 aa1.89□□□□□ -2.11
SRSF4-203ENST00000477193 DEFB135Q30KP9 77 aa1.89□□□□□ -2.11
SRSF4-203ENST00000477193 LCE3DQ9BYE3 92 aa1.89□□□□□ -2.11
SRSF4-203ENST00000477193 ZDBF2Q9HCK1 2354 aa1.89□□□□□ -2.11
SRSF4-203ENST00000477193 AKAP6Q13023 2319 aa1.89□□□□□ -2.11
SRSF4-203ENST00000477193 C2CD3Q4AC94 2353 aa1.88□□□□□ -2.11
SRSF4-203ENST00000477193 CREBBPQ92793 2442 aa1.88□□□□□ -2.11
SRSF4-203ENST00000477193 H0YAA0 97 aa1.88□□□□□ -2.11
SRSF4-203ENST00000477193 C20orf166-AS1Q96NR2 134 aa1.88□□□□□ -2.11
SRSF4-203ENST00000477193 ASPMQ8IZT6 3477 aa1.87□□□□□ -2.11
SRSF4-203ENST00000477193 ADGRG4Q8IZF6 3080 aa1.87□□□□□ -2.11
SRSF4-203ENST00000477193 A0A087WTM6 91 aa1.87□□□□□ -2.11
SRSF4-203ENST00000477193 A0A096LNI7 61 aa1.87□□□□□ -2.11
SRSF4-203ENST00000477193 LOC400499M0QZD8 3231 aa1.87□□□□□ -2.11
SRSF4-203ENST00000477193 HTN3P15516 51 aa1.87□□□□□ -2.11
SRSF4-203ENST00000477193 DNAH1Q9P2D7 4330 aa1.87□□□□□ -2.11
SRSF4-203ENST00000477193 AKAP13Q12802 2813 aa1.86□□□□□ -2.11
SRSF4-203ENST00000477193 HRNRQ86YZ3 2850 aaPredicted RBP1.86□□□□□ -2.11
SRSF4-203ENST00000477193 K7EIL1 84 aa1.86□□□□□ -2.11
SRSF4-203ENST00000477193 DEFB4AO15263 64 aa1.86□□□□□ -2.11
SRSF4-203ENST00000477193 COX6B2Q6YFQ2 88 aa1.86□□□□□ -2.11
SRSF4-203ENST00000477193 Q6ZSA8 131 aa1.86□□□□□ -2.11
SRSF4-203ENST00000477193 OTOGLQ3ZCN5 2332 aa1.86□□□□□ -2.11
SRSF4-203ENST00000477193 CEP290O15078 2479 aa1.85□□□□□ -2.11
SRSF4-203ENST00000477193 SPTAN1Q13813 2472 aaKnown RBP1.85□□□□□ -2.11
SRSF4-203ENST00000477193 SVEP1Q4LDE5 3571 aa1.85□□□□□ -2.11
SRSF4-203ENST00000477193 NBPF19A0A087WUL8 3843 aa1.85□□□□□ -2.11
SRSF4-203ENST00000477193 KRTAP10-8P60410 259 aa1.85□□□□□ -2.11
SRSF4-203ENST00000477193 DEFB113Q30KQ7 82 aa1.85□□□□□ -2.11
SRSF4-203ENST00000477193 A0A1B0GU33 70 aa1.84□□□□□ -2.11
SRSF4-203ENST00000477193 H1FX-AS1Q4G0G2 97 aa1.84□□□□□ -2.11
SRSF4-203ENST00000477193 PSORS1C2Q9UIG4 136 aa1.84□□□□□ -2.11
SRSF4-203ENST00000477193 ANK3Q12955 4377 aaKnown RBP1.84□□□□□ -2.12
SRSF4-203ENST00000477193 ACACAQ13085 2346 aa1.83□□□□□ -2.12
SRSF4-203ENST00000477193 RELNP78509 3460 aa1.83□□□□□ -2.12
SRSF4-203ENST00000477193 DCHS2Q6V1P9 2916 aa1.83□□□□□ -2.12
SRSF4-203ENST00000477193 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
SRSF4-203ENST00000477193 DEFB123Q8N688 67 aa1.83□□□□□ -2.12
SRSF4-203ENST00000477193 EYSQ5T1H1 3165 aa1.83□□□□□ -2.12
SRSF4-203ENST00000477193 TACC2O95359 2948 aa1.83□□□□□ -2.12
SRSF4-203ENST00000477193 NBASA2RRP1 2371 aa1.83□□□□□ -2.12
SRSF4-203ENST00000477193 CELSR1Q9NYQ6 3014 aa1.82□□□□□ -2.12
SRSF4-203ENST00000477193 SSBP3-AS1Q7Z2R9 100 aa1.82□□□□□ -2.12
SRSF4-203ENST00000477193 BOD1L1Q8NFC6 3051 aa1.82□□□□□ -2.12
SRSF4-203ENST00000477193 KRTAP10-10P60014 251 aa1.81□□□□□ -2.12
SRSF4-203ENST00000477193 MAP1AP78559 2803 aaPredicted RBP1.81□□□□□ -2.12
SRSF4-203ENST00000477193 ANKRD11Q6UB99 2663 aaPredicted RBP1.8□□□□□ -2.12
SRSF4-203ENST00000477193 VPS13CQ709C8 3753 aa1.8□□□□□ -2.12
SRSF4-203ENST00000477193 SPTA1P02549 2419 aa1.8□□□□□ -2.12
SRSF4-203ENST00000477193 PRRC2CQ9Y520 2896 aaKnown RBP1.8□□□□□ -2.12
SRSF4-203ENST00000477193 CSPG4Q6UVK1 2322 aa1.79□□□□□ -2.12
SRSF4-203ENST00000477193 TLN1Q9Y490 2541 aaKnown RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms