RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 TRAPPC1Q9Y5R8 145 aa7.2□□□□□ -1.26
SMG5-204ENST00000476954 APOC3P02656 99 aa7.19□□□□□ -1.26
SMG5-204ENST00000476954 Q6JHZ5 121 aa7.18□□□□□ -1.26
SMG5-204ENST00000476954 PMCHL2Q9BQD1 86 aa7.17□□□□□ -1.26
SMG5-204ENST00000476954 HERVK_113P61574 105 aa7.16□□□□□ -1.26
SMG5-204ENST00000476954 SVBPQ8N300 66 aa7.15□□□□□ -1.26
SMG5-204ENST00000476954 GPR98Q8WXG9 6306 aa7.15□□□□□ -1.27
SMG5-204ENST00000476954 SNAPINO95295 136 aa7.13□□□□□ -1.27
SMG5-204ENST00000476954 PLNP26678 52 aa7.13□□□□□ -1.27
SMG5-204ENST00000476954 MTURNQ8N3F0 131 aa7.13□□□□□ -1.27
SMG5-204ENST00000476954 CHCHD1Q96BP2 118 aaKnown RBP7.13□□□□□ -1.27
SMG5-204ENST00000476954 OCIAD2Q56VL3 154 aa7.12□□□□□ -1.27
SMG5-204ENST00000476954 YPEL4Q96NS1 127 aa7.12□□□□□ -1.27
SMG5-204ENST00000476954 SERF1AO75920 110 aa7.11□□□□□ -1.27
SMG5-204ENST00000476954 DPM2O94777 84 aa7.11□□□□□ -1.27
SMG5-204ENST00000476954 KRTAP2-2Q9BYT5 123 aa7.11□□□□□ -1.27
SMG5-204ENST00000476954 KRTAP2-1Q9BYU5 128 aa7.11□□□□□ -1.27
SMG5-204ENST00000476954 MT1BP07438 61 aa7.09□□□□□ -1.27
SMG5-204ENST00000476954 TRAV13-2A0A0B4J235 113 aa7.08□□□□□ -1.28
SMG5-204ENST00000476954 IGKCP01834 107 aa7.08□□□□□ -1.28
SMG5-204ENST00000476954 NHP2Q9NX24 153 aaKnown RBP7.08□□□□□ -1.28
SMG5-204ENST00000476954 H3BUT2 72 aa7.07□□□□□ -1.28
SMG5-204ENST00000476954 TIMM17BO60830 172 aa7.07□□□□□ -1.28
SMG5-204ENST00000476954 A4D1N5 150 aa7.06□□□□□ -1.28
SMG5-204ENST00000476954 A6NDN8 102 aa7.06□□□□□ -1.28
SMG5-204ENST00000476954 SPRR2EP22531 72 aa7.06□□□□□ -1.28
SMG5-204ENST00000476954 SPRR2BP35325 72 aa7.06□□□□□ -1.28
SMG5-204ENST00000476954 SPRR2AP35326 72 aa7.06□□□□□ -1.28
SMG5-204ENST00000476954 E9PLD3 99 aa7.05□□□□□ -1.28
SMG5-204ENST00000476954 HSBP1O75506 76 aa7.05□□□□□ -1.28
SMG5-204ENST00000476954 ANKRD39Q53RE8 183 aa7.05□□□□□ -1.28
SMG5-204ENST00000476954 Q6ZQY7 126 aa7.05□□□□□ -1.28
SMG5-204ENST00000476954 COLCA2A8K830 154 aa7.04□□□□□ -1.28
SMG5-204ENST00000476954 LINC00313P59037 77 aa7.04□□□□□ -1.28
SMG5-204ENST00000476954 KRTAP10-5P60370 271 aa7.04□□□□□ -1.28
SMG5-204ENST00000476954 LEPROTL1O95214 131 aa7.03□□□□□ -1.28
SMG5-204ENST00000476954 SMIM11BQ8TCY0 68 aa7.03□□□□□ -1.28
SMG5-204ENST00000476954 SS18L2Q9UHA2 77 aa7.03□□□□□ -1.28
SMG5-204ENST00000476954 ZNF815PA8K554 130 aa7.02□□□□□ -1.29
SMG5-204ENST00000476954 SIGMAR1Q99720 223 aa7.02□□□□□ -1.29
SMG5-204ENST00000476954 TTTY13Q9BZ97 58 aa7.02□□□□□ -1.29
SMG5-204ENST00000476954 LINC00575Q6W349 94 aa7□□□□□ -1.29
SMG5-204ENST00000476954 GHRHP01286 108 aa6.99□□□□□ -1.29
SMG5-204ENST00000476954 SPINK7P58062 85 aa6.99□□□□□ -1.29
SMG5-204ENST00000476954 A0A087WSZ3 146 aa6.98□□□□□ -1.29
SMG5-204ENST00000476954 FABP4P15090 132 aa6.98□□□□□ -1.29
SMG5-204ENST00000476954 LINC00310P59036 64 aa6.97□□□□□ -1.29
SMG5-204ENST00000476954 SPRR2FQ96RM1 72 aa6.97□□□□□ -1.29
SMG5-204ENST00000476954 A0A1W2PNM2 257 aa6.96□□□□□ -1.3
SMG5-204ENST00000476954 hADV29S1A0JD25 119 aa6.95□□□□□ -1.3
SMG5-204ENST00000476954 WFDC13Q8IUB5 93 aa6.95□□□□□ -1.3
SMG5-204ENST00000476954 HSPB8Q9UJY1 196 aa6.95□□□□□ -1.3
SMG5-204ENST00000476954 Q5VV11 94 aa6.94□□□□□ -1.3
SMG5-204ENST00000476954 SNHG12Q9BXW3 62 aa6.93□□□□□ -1.3
SMG5-204ENST00000476954 TRGC2P03986 189 aa6.92□□□□□ -1.3
SMG5-204ENST00000476954 TEN1Q86WV5 123 aa6.92□□□□□ -1.3
SMG5-204ENST00000476954 IGKV4-1P06312 121 aa6.9□□□□□ -1.3
SMG5-204ENST00000476954 MUSTN1Q8IVN3 82 aa6.9□□□□□ -1.3
SMG5-204ENST00000476954 FAM218AQ96MZ4 157 aa6.9□□□□□ -1.3
SMG5-204ENST00000476954 VAMP3Q15836 100 aa6.89□□□□□ -1.31
SMG5-204ENST00000476954 KRTAP19-8Q3LI54 63 aa6.89□□□□□ -1.31
SMG5-204ENST00000476954 ZCCHC13Q8WW36 166 aaKnown RBP6.89□□□□□ -1.31
SMG5-204ENST00000476954 HIST1H2BKO60814 126 aa6.88□□□□□ -1.31
SMG5-204ENST00000476954 SCGB1D1O95968 90 aa6.88□□□□□ -1.31
SMG5-204ENST00000476954 HIST1H2BJP06899 126 aa6.88□□□□□ -1.31
SMG5-204ENST00000476954 HIST1H2BOP23527 126 aa6.88□□□□□ -1.31
SMG5-204ENST00000476954 HIST1H2BBP33778 126 aa6.88□□□□□ -1.31
SMG5-204ENST00000476954 HIST1H2BDP58876 126 aa6.88□□□□□ -1.31
SMG5-204ENST00000476954 HIST1H2BCP62807 126 aa6.88□□□□□ -1.31
SMG5-204ENST00000476954 HIST2H2BEQ16778 126 aa6.88□□□□□ -1.31
SMG5-204ENST00000476954 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.88□□□□□ -1.31
SMG5-204ENST00000476954 HIST1H2BHQ93079 126 aa6.88□□□□□ -1.31
SMG5-204ENST00000476954 HIST1H2BNQ99877 126 aa6.88□□□□□ -1.31
SMG5-204ENST00000476954 HIST1H2BMQ99879 126 aa6.88□□□□□ -1.31
SMG5-204ENST00000476954 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.87□□□□□ -1.31
SMG5-204ENST00000476954 TMA7Q9Y2S6 64 aaKnown RBP6.87□□□□□ -1.31
SMG5-204ENST00000476954 DEFB116Q30KQ4 102 aa6.86□□□□□ -1.31
SMG5-204ENST00000476954 LCE1AQ5T7P2 110 aa6.86□□□□□ -1.31
SMG5-204ENST00000476954 IGHV6-1A0A0B4J1U7 121 aa6.85□□□□□ -1.31
SMG5-204ENST00000476954 IFITM1P13164 125 aa6.85□□□□□ -1.31
SMG5-204ENST00000476954 SCGB1D4Q6XE38 83 aa6.84□□□□□ -1.31
SMG5-204ENST00000476954 PPDPFLQ8WWR9 84 aa6.84□□□□□ -1.31
SMG5-204ENST00000476954 COA6Q5JTJ3 125 aaKnown RBP6.83□□□□□ -1.32
SMG5-204ENST00000476954 SPRR2DP22532 72 aa6.82□□□□□ -1.32
SMG5-204ENST00000476954 H1FX-AS1Q4G0G2 97 aa6.81□□□□□ -1.32
SMG5-204ENST00000476954 COPS9Q8WXC6 57 aa6.81□□□□□ -1.32
SMG5-204ENST00000476954 SYS1-DBNDD2H3BUS1 97 aa6.78□□□□□ -1.32
SMG5-204ENST00000476954 SNRPEP62304 92 aaKnown RBP6.78□□□□□ -1.32
SMG5-204ENST00000476954 SPRR2GQ9BYE4 73 aa6.78□□□□□ -1.32
SMG5-204ENST00000476954 NDUFV3P56181 108 aaKnown RBP6.77□□□□□ -1.33
SMG5-204ENST00000476954 HIST3H2BBQ8N257 126 aa6.77□□□□□ -1.33
SMG5-204ENST00000476954 LOC105371267A0A1B0GV96 52 aa6.75□□□□□ -1.33
SMG5-204ENST00000476954 FAM236AA0A1B0GUQ0 79 aa6.74□□□□□ -1.33
SMG5-204ENST00000476954 FAM236BA0A1B0GV22 79 aa6.74□□□□□ -1.33
SMG5-204ENST00000476954 LINC01545Q5VT33 79 aa6.74□□□□□ -1.33
SMG5-204ENST00000476954 LINC00472Q9H8W2 130 aa6.74□□□□□ -1.33
SMG5-204ENST00000476954 S100A6P06703 90 aa6.73□□□□□ -1.33
SMG5-204ENST00000476954 HIST1H2BLQ99880 126 aa6.73□□□□□ -1.33
SMG5-204ENST00000476954 H3BMG7 143 aa6.72□□□□□ -1.33
SMG5-204ENST00000476954 LCE3BQ5TA77 95 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms