RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 SPANXA2-OT1Q8N9U9 137 aa11.26□□□□□ -0.61
CCM2-207ENST00000475551 H3BPC8 53 aa11.24□□□□□ -0.61
CCM2-207ENST00000475551 KRTAP10-11P60412 298 aa11.24□□□□□ -0.61
CCM2-207ENST00000475551 Q5VV11 94 aa11.24□□□□□ -0.61
CCM2-207ENST00000475551 LINC00208Q96KT6 92 aa11.24□□□□□ -0.61
CCM2-207ENST00000475551 KRTAP29-1A8MX34 341 aaPredicted RBP11.24□□□□□ -0.61
CCM2-207ENST00000475551 DNAH10OSP0CZ25 163 aa11.24□□□□□ -0.61
CCM2-207ENST00000475551 DEFB116Q30KQ4 102 aa11.23□□□□□ -0.61
CCM2-207ENST00000475551 REG3GQ6UW15 175 aa11.23□□□□□ -0.61
CCM2-207ENST00000475551 RETNQ9HD89 108 aa11.23□□□□□ -0.61
CCM2-207ENST00000475551 IGLV8-61A0A075B6I0 122 aa11.22□□□□□ -0.61
CCM2-207ENST00000475551 A0A0G2JQZ4 141 aa11.21□□□□□ -0.61
CCM2-207ENST00000475551 A0A1W2PNN7 141 aa11.21□□□□□ -0.61
CCM2-207ENST00000475551 A0A087WSZ3 146 aa11.2□□□□□ -0.62
CCM2-207ENST00000475551 PRB2P02812 416 aaPredicted RBP11.19□□□□□ -0.62
CCM2-207ENST00000475551 LIMD2Q9BT23 127 aa11.19□□□□□ -0.62
CCM2-207ENST00000475551 Q8N9P0 234 aaPredicted RBP11.19□□□□□ -0.62
CCM2-207ENST00000475551 H0Y9P7 68 aa11.18□□□□□ -0.62
CCM2-207ENST00000475551 LINC00588Q9Y4M8 146 aa11.18□□□□□ -0.62
CCM2-207ENST00000475551 DEFB131BA0A096LNP1 70 aa11.17□□□□□ -0.62
CCM2-207ENST00000475551 UBE2AP49459 152 aa11.16□□□□□ -0.62
CCM2-207ENST00000475551 RPL37AP61513 92 aaKnown RBP11.16□□□□□ -0.62
CCM2-207ENST00000475551 CASC10Q5T4H9 136 aa11.16□□□□□ -0.62
CCM2-207ENST00000475551 CASC2Q6XLA1 102 aa11.15□□□□□ -0.62
CCM2-207ENST00000475551 MGAM2Q2M2H8 2515 aa11.14□□□□□ -0.63
CCM2-207ENST00000475551 DNAH3Q8TD57 4116 aa11.14□□□□□ -0.63
CCM2-207ENST00000475551 A8MU10 97 aa11.14□□□□□ -0.63
CCM2-207ENST00000475551 C9orf163Q8N9P6 203 aa11.13□□□□□ -0.63
CCM2-207ENST00000475551 CHKB-CPT1BH3BT56 60 aa11.12□□□□□ -0.63
CCM2-207ENST00000475551 CNBPP62633 177 aaKnown RBP11.12□□□□□ -0.63
CCM2-207ENST00000475551 NOTCH1P46531 2555 aa11.12□□□□□ -0.63
CCM2-207ENST00000475551 NBEAL1Q6ZS30 2694 aa11.11□□□□□ -0.63
CCM2-207ENST00000475551 A8MWP4 228 aa11.09□□□□□ -0.63
CCM2-207ENST00000475551 CD164Q04900 197 aa11.09□□□□□ -0.63
CCM2-207ENST00000475551 C11orf45Q8TAV5 145 aa11.09□□□□□ -0.63
CCM2-207ENST00000475551 PRR15LQ9BU68 103 aa11.09□□□□□ -0.63
CCM2-207ENST00000475551 C16orf90A8MZG2 172 aa11.08□□□□□ -0.64
CCM2-207ENST00000475551 PRLHP81277 87 aa11.08□□□□□ -0.64
CCM2-207ENST00000475551 K7EIL1 84 aa11.06□□□□□ -0.64
CCM2-207ENST00000475551 Q75L30 129 aa11.06□□□□□ -0.64
CCM2-207ENST00000475551 LINC00472Q9H8W2 130 aa11.06□□□□□ -0.64
CCM2-207ENST00000475551 LOC101927531A0A1B0GV80 90 aa11.05□□□□□ -0.64
CCM2-207ENST00000475551 IGLV7-46A0A075B6I9 117 aa11.03□□□□□ -0.64
CCM2-207ENST00000475551 DNAH1Q9P2D7 4330 aa11.03□□□□□ -0.64
CCM2-207ENST00000475551 COA5Q86WW8 74 aa11.02□□□□□ -0.64
CCM2-207ENST00000475551 SPRR1BP22528 89 aa11.01□□□□□ -0.65
CCM2-207ENST00000475551 ATP11AUNQ6ZP68 121 aa11.01□□□□□ -0.65
CCM2-207ENST00000475551 KTN1-AS1Q86SY8 53 aa11.01□□□□□ -0.65
CCM2-207ENST00000475551 LCA10Q71F78 164 aa11□□□□□ -0.65
CCM2-207ENST00000475551 A0A096LNI7 61 aa10.98□□□□□ -0.65
CCM2-207ENST00000475551 MMP24-AS1A0A0U1RRL7 71 aa10.98□□□□□ -0.65
CCM2-207ENST00000475551 A6NED7 52 aa10.96□□□□□ -0.65
CCM2-207ENST00000475551 SPTSSBQ8NFR3 76 aa10.95□□□□□ -0.66
CCM2-207ENST00000475551 H0Y9J4 135 aa10.95□□□□□ -0.66
CCM2-207ENST00000475551 IGKV2-24A0A0C4DH68 120 aa10.94□□□□□ -0.66
CCM2-207ENST00000475551 MEGF8Q7Z7M0 2845 aa10.94□□□□□ -0.66
CCM2-207ENST00000475551 CDC42SE1Q9NRR8 79 aa10.93□□□□□ -0.66
CCM2-207ENST00000475551 NDUFS5O43920 106 aa10.91□□□□□ -0.66
CCM2-207ENST00000475551 LINC01558Q9Y6Z2 57 aa10.91□□□□□ -0.66
CCM2-207ENST00000475551 A6NN06 94 aa10.91□□□□□ -0.66
CCM2-207ENST00000475551 TP53AIP1Q9HCN2 124 aa10.91□□□□□ -0.66
CCM2-207ENST00000475551 PLAC8Q9NZF1 115 aa10.9□□□□□ -0.66
CCM2-207ENST00000475551 ASB16-AS1Q495Z4 193 aa10.9□□□□□ -0.67
CCM2-207ENST00000475551 PHF5AQ7RTV0 110 aaKnown RBP10.9□□□□□ -0.67
CCM2-207ENST00000475551 TENM3Q9P273 2699 aa10.89□□□□□ -0.67
CCM2-207ENST00000475551 KRTAP11-1Q8IUC1 163 aa10.88□□□□□ -0.67
CCM2-207ENST00000475551 PCOTHQ58A44 107 aa10.87□□□□□ -0.67
CCM2-207ENST00000475551 RBM12B-AS1Q9P1G2 102 aa10.86□□□□□ -0.67
CCM2-207ENST00000475551 Q6ZR54 194 aa10.86□□□□□ -0.67
CCM2-207ENST00000475551 MOBPQ13875 183 aa10.85□□□□□ -0.67
CCM2-207ENST00000475551 PRKDCP78527 4128 aaKnown RBP10.84□□□□□ -0.67
CCM2-207ENST00000475551 HUWE1Q7Z6Z7 4374 aaKnown RBP10.84□□□□□ -0.67
CCM2-207ENST00000475551 DNAH9Q9NYC9 4486 aa10.84□□□□□ -0.67
CCM2-207ENST00000475551 SPAG11AQ6PDA7 123 aa10.82□□□□□ -0.68
CCM2-207ENST00000475551 Q96NJ1 140 aa10.82□□□□□ -0.68
CCM2-207ENST00000475551 COL7A1Q02388 2944 aa10.82□□□□□ -0.68
CCM2-207ENST00000475551 C8orf17Q9NRJ1 99 aa10.79□□□□□ -0.68
CCM2-207ENST00000475551 CHTF8P0CG12 524 aa10.78□□□□□ -0.68
CCM2-207ENST00000475551 HRES1P13985 223 aa10.77□□□□□ -0.69
CCM2-207ENST00000475551 C7orf65Q6ZTY9 151 aa10.76□□□□□ -0.69
CCM2-207ENST00000475551 KRTAP1-5Q9BYS1 174 aa10.76□□□□□ -0.69
CCM2-207ENST00000475551 FBN3Q75N90 2809 aa10.75□□□□□ -0.69
CCM2-207ENST00000475551 KRTAP13-1Q8IUC0 172 aa10.75□□□□□ -0.69
CCM2-207ENST00000475551 C14orf177Q52M58 125 aa10.74□□□□□ -0.69
CCM2-207ENST00000475551 SPINK7P58062 85 aa10.73□□□□□ -0.69
CCM2-207ENST00000475551 A0A1B0GVX0 72 aa10.71□□□□□ -0.69
CCM2-207ENST00000475551 SRRM2Q9UQ35 2752 aaKnown RBP10.7□□□□□ -0.7
CCM2-207ENST00000475551 MRPL34Q9BQ48 92 aaKnown RBP10.69□□□□□ -0.7
CCM2-207ENST00000475551 DNAH10Q8IVF4 4471 aa10.69□□□□□ -0.7
CCM2-207ENST00000475551 TENM2Q9NT68 2774 aa10.69□□□□□ -0.7
CCM2-207ENST00000475551 IGHV6-1A0A0B4J1U7 121 aa10.68□□□□□ -0.7
CCM2-207ENST00000475551 IGLV9-49A0A0B4J1Y8 123 aa10.67□□□□□ -0.7
CCM2-207ENST00000475551 STAB2Q8WWQ8 2551 aa10.64□□□□□ -0.71
CCM2-207ENST00000475551 LINC00483Q53H64 154 aa10.64□□□□□ -0.71
CCM2-207ENST00000475551 CDK2AP2O75956 126 aa10.63□□□□□ -0.71
CCM2-207ENST00000475551 TGP01266 2768 aa10.6□□□□□ -0.71
CCM2-207ENST00000475551 A0A087X002 238 aa10.58□□□□□ -0.72
CCM2-207ENST00000475551 PANO1I0J062 215 aa10.58□□□□□ -0.72
CCM2-207ENST00000475551 NOTCH2NLQ7Z3S9 236 aa10.58□□□□□ -0.72
CCM2-207ENST00000475551 LYSTQ99698 3801 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms