RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 ABCA2Q9BZC7 2435 aa0.35□□□□□ -2.35
TM9SF3-204ENST00000475401 LPAP08519 4548 aa0.34□□□□□ -2.35
TM9SF3-204ENST00000475401 PTPN13Q12923 2485 aa0.34□□□□□ -2.36
TM9SF3-204ENST00000475401 KMT2AQ03164 3969 aa0.34□□□□□ -2.36
TM9SF3-204ENST00000475401 CACNA1AO00555 2505 aa0.33□□□□□ -2.36
TM9SF3-204ENST00000475401 LOC730098B7Z3J9 87 aa0.33□□□□□ -2.36
TM9SF3-204ENST00000475401 LY75O60449 1722 aa0.32□□□□□ -2.36
TM9SF3-204ENST00000475401 IGSF10Q6WRI0 2623 aa0.32□□□□□ -2.36
TM9SF3-204ENST00000475401 CHD8Q9HCK8 2581 aa0.31□□□□□ -2.36
TM9SF3-204ENST00000475401 EP300Q09472 2414 aaPredicted RBP0.31□□□□□ -2.36
TM9SF3-204ENST00000475401 S100ZQ8WXG8 99 aa0.31□□□□□ -2.36
TM9SF3-204ENST00000475401 UBR5O95071 2799 aaPredicted RBP0.3□□□□□ -2.36
TM9SF3-204ENST00000475401 ALS2Q96Q42 1657 aa0.3□□□□□ -2.36
TM9SF3-204ENST00000475401 ALMS1Q8TCU4 4167 aa0.3□□□□□ -2.36
TM9SF3-204ENST00000475401 KIAA0586Q9BVV6 1533 aa0.29□□□□□ -2.36
TM9SF3-204ENST00000475401 SFTA3P0C7M3 94 aa0.29□□□□□ -2.36
TM9SF3-204ENST00000475401 DEFB130BP0DP73 79 aa0.29□□□□□ -2.36
TM9SF3-204ENST00000475401 DEFB130AP0DP74 79 aa0.29□□□□□ -2.36
TM9SF3-204ENST00000475401 DEFB135Q30KP9 77 aa0.29□□□□□ -2.36
TM9SF3-204ENST00000475401 KMT2DO14686 5537 aa0.28□□□□□ -2.36
TM9SF3-204ENST00000475401 MDN1Q9NU22 5596 aa0.28□□□□□ -2.36
TM9SF3-204ENST00000475401 ABCA10Q8WWZ4 1543 aa0.28□□□□□ -2.37
TM9SF3-204ENST00000475401 IAPPP10997 89 aa0.26□□□□□ -2.37
TM9SF3-204ENST00000475401 MAST1Q9Y2H9 1570 aa0.26□□□□□ -2.37
TM9SF3-204ENST00000475401 TRANK1O15050 2925 aa0.26□□□□□ -2.37
TM9SF3-204ENST00000475401 BPTFQ12830 3046 aa0.26□□□□□ -2.37
TM9SF3-204ENST00000475401 ITSN2Q9NZM3 1697 aa0.25□□□□□ -2.37
TM9SF3-204ENST00000475401 HMCN2Q8NDA2 5059 aa0.24□□□□□ -2.37
TM9SF3-204ENST00000475401 SPRR2BP35325 72 aa0.24□□□□□ -2.37
TM9SF3-204ENST00000475401 KIF1AQ12756 1690 aa0.24□□□□□ -2.37
TM9SF3-204ENST00000475401 PDE4DIPQ5VU43 2346 aa0.24□□□□□ -2.37
TM9SF3-204ENST00000475401 K7EMI3 77 aa0.23□□□□□ -2.37
TM9SF3-204ENST00000475401 SETXQ7Z333 2677 aaKnown RBP0.22□□□□□ -2.37
TM9SF3-204ENST00000475401 HSPG2P98160 4391 aa0.22□□□□□ -2.37
TM9SF3-204ENST00000475401 SMIM5Q71RC9 77 aa0.21□□□□□ -2.38
TM9SF3-204ENST00000475401 WNK1Q9H4A3 2382 aa0.21□□□□□ -2.38
TM9SF3-204ENST00000475401 DSPP15924 2871 aaKnown RBP0.2□□□□□ -2.38
TM9SF3-204ENST00000475401 PREX2Q70Z35 1606 aa0.2□□□□□ -2.38
TM9SF3-204ENST00000475401 AKAP13Q12802 2813 aa0.2□□□□□ -2.38
TM9SF3-204ENST00000475401 CLASP1Q7Z460 1538 aa0.19□□□□□ -2.38
TM9SF3-204ENST00000475401 PRXQ9BXM0 1461 aa0.19□□□□□ -2.38
TM9SF3-204ENST00000475401 ACANP16112 2415 aa0.18□□□□□ -2.38
TM9SF3-204ENST00000475401 CROCC2H7BZ55 1655 aa0.18□□□□□ -2.38
TM9SF3-204ENST00000475401 IGIPA6NJ69 53 aa0.17□□□□□ -2.38
TM9SF3-204ENST00000475401 MINOS1Q5TGZ0 78 aa0.17□□□□□ -2.38
TM9SF3-204ENST00000475401 DMBT1Q9UGM3 2413 aaPredicted RBP0.17□□□□□ -2.38
TM9SF3-204ENST00000475401 HECTD4Q9Y4D8 3996 aa0.17□□□□□ -2.38
TM9SF3-204ENST00000475401 M0R1W7 72 aa0.16□□□□□ -2.38
TM9SF3-204ENST00000475401 RPS27P42677 84 aaKnown RBP0.16□□□□□ -2.38
TM9SF3-204ENST00000475401 RPS27LQ71UM5 84 aaKnown RBP0.16□□□□□ -2.38
TM9SF3-204ENST00000475401 MAP1BP46821 2468 aaKnown RBP0.16□□□□□ -2.38
TM9SF3-204ENST00000475401 APC2O95996 2303 aa0.16□□□□□ -2.38
TM9SF3-204ENST00000475401 PCNX1Q96RV3 2341 aa0.16□□□□□ -2.38
TM9SF3-204ENST00000475401 UGGT1Q9NYU2 1555 aa0.15□□□□□ -2.38
TM9SF3-204ENST00000475401 CPS1P31327 1500 aa0.15□□□□□ -2.39
TM9SF3-204ENST00000475401 H0YGG7 62 aa0.15□□□□□ -2.39
TM9SF3-204ENST00000475401 PRLHP81277 87 aa0.15□□□□□ -2.39
TM9SF3-204ENST00000475401 NCBP2-AS2Q69YL0 99 aa0.15□□□□□ -2.39
TM9SF3-204ENST00000475401 NSD1Q96L73 2696 aaPredicted RBP0.15□□□□□ -2.39
TM9SF3-204ENST00000475401 LYSTQ99698 3801 aa0.15□□□□□ -2.39
TM9SF3-204ENST00000475401 COL7A1Q02388 2944 aa0.14□□□□□ -2.39
TM9SF3-204ENST00000475401 TOGARAM1Q9Y4F4 1720 aa0.14□□□□□ -2.39
TM9SF3-204ENST00000475401 FLNCQ14315 2725 aa0.14□□□□□ -2.39
TM9SF3-204ENST00000475401 WT1-ASQ06250 92 aa0.14□□□□□ -2.39
TM9SF3-204ENST00000475401 NMES1Q9C002 83 aa0.14□□□□□ -2.39
TM9SF3-204ENST00000475401 EEA1Q15075 1411 aa0.13□□□□□ -2.39
TM9SF3-204ENST00000475401 PRRC2CQ9Y520 2896 aaKnown RBP0.13□□□□□ -2.39
TM9SF3-204ENST00000475401 GPR98Q8WXG9 6306 aa0.13□□□□□ -2.39
TM9SF3-204ENST00000475401 SERF2P84101 59 aa0.13□□□□□ -2.39
TM9SF3-204ENST00000475401 S4R3F8 94 aa0.13□□□□□ -2.39
TM9SF3-204ENST00000475401 FLNBO75369 2602 aaKnown RBP0.13□□□□□ -2.39
TM9SF3-204ENST00000475401 CDC42BPAQ5VT25 1732 aa0.13□□□□□ -2.39
TM9SF3-204ENST00000475401 HECTD1Q9ULT8 2610 aa0.12□□□□□ -2.39
TM9SF3-204ENST00000475401 C6orf48Q9UBA6 75 aa0.12□□□□□ -2.39
TM9SF3-204ENST00000475401 LRP1BQ9NZR2 4599 aa0.11□□□□□ -2.39
TM9SF3-204ENST00000475401 TNRC18O15417 2968 aaPredicted RBP0.11□□□□□ -2.39
TM9SF3-204ENST00000475401 FCER1GP30273 86 aa0.11□□□□□ -2.39
TM9SF3-204ENST00000475401 ANKRD36CQ5JPF3 1778 aa0.11□□□□□ -2.39
TM9SF3-204ENST00000475401 MROH2AA6NES4 1674 aa0.11□□□□□ -2.39
TM9SF3-204ENST00000475401 DCHS2Q6V1P9 2916 aa0.1□□□□□ -2.39
TM9SF3-204ENST00000475401 SPRR2GQ9BYE4 73 aa0.1□□□□□ -2.39
TM9SF3-204ENST00000475401 FSIP2Q5CZC0 6907 aa0.1□□□□□ -2.39
TM9SF3-204ENST00000475401 SYCP2Q9BX26 1530 aa0.09□□□□□ -2.39
TM9SF3-204ENST00000475401 SYNE2Q8WXH0 6885 aaKnown RBP0.09□□□□□ -2.4
TM9SF3-204ENST00000475401 NBASA2RRP1 2371 aa0.09□□□□□ -2.4
TM9SF3-204ENST00000475401 LRP2P98164 4655 aa0.08□□□□□ -2.4
TM9SF3-204ENST00000475401 DEFB106AQ8N104 65 aa0.07□□□□□ -2.4
TM9SF3-204ENST00000475401 PKD1P98161 4303 aa0.06□□□□□ -2.4
TM9SF3-204ENST00000475401 SPRR2AP35326 72 aa0.06□□□□□ -2.4
TM9SF3-204ENST00000475401 AGLP35573 1532 aa0.06□□□□□ -2.4
TM9SF3-204ENST00000475401 FLNAP21333 2647 aaKnown RBP0.06□□□□□ -2.4
TM9SF3-204ENST00000475401 COL6A3P12111 3177 aa0.06□□□□□ -2.4
TM9SF3-204ENST00000475401 ADCY10Q96PN6 1610 aa0.05□□□□□ -2.4
TM9SF3-204ENST00000475401 MACF1Q9UPN3 7388 aaKnown RBP0.05□□□□□ -2.4
TM9SF3-204ENST00000475401 KRTAP6-2Q3LI66 62 aa0.05□□□□□ -2.4
TM9SF3-204ENST00000475401 SSPOA2VEC9 5147 aa0.05□□□□□ -2.4
TM9SF3-204ENST00000475401 CREBBPQ92793 2442 aa0.05□□□□□ -2.4
TM9SF3-204ENST00000475401 VPS13BQ7Z7G8 4022 aa0.04□□□□□ -2.4
TM9SF3-204ENST00000475401 PKHD1P08F94 4074 aa0.04□□□□□ -2.4
TM9SF3-204ENST00000475401 ZANQ9Y493 2812 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms