RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ACYP1P07311 99 aa8.36□□□□□ -1.07
TRAF4-210ENST00000475329 C21orf62-AS1Q17RA5 79 aa8.36□□□□□ -1.07
TRAF4-210ENST00000475329 Q6ZQT0 140 aa8.36□□□□□ -1.07
TRAF4-210ENST00000475329 SMIM29Q86T20 159 aa8.36□□□□□ -1.07
TRAF4-210ENST00000475329 SPRR4Q96PI1 79 aa8.35□□□□□ -1.07
TRAF4-210ENST00000475329 VPS25Q9BRG1 176 aa8.34□□□□□ -1.07
TRAF4-210ENST00000475329 XGP55808 180 aa8.33□□□□□ -1.08
TRAF4-210ENST00000475329 LINC00483Q53H64 154 aa8.32□□□□□ -1.08
TRAF4-210ENST00000475329 PKHD1P08F94 4074 aa8.32□□□□□ -1.08
TRAF4-210ENST00000475329 IGLV8-61A0A075B6I0 122 aa8.3□□□□□ -1.08
TRAF4-210ENST00000475329 RPL37AP61513 92 aaKnown RBP8.3□□□□□ -1.08
TRAF4-210ENST00000475329 CDIP1Q9H305 208 aa8.3□□□□□ -1.08
TRAF4-210ENST00000475329 DYNC1H1Q14204 4646 aaKnown RBP8.29□□□□□ -1.08
TRAF4-210ENST00000475329 LRP1BQ9NZR2 4599 aa8.29□□□□□ -1.08
TRAF4-210ENST00000475329 Q6JHZ5 121 aa8.27□□□□□ -1.09
TRAF4-210ENST00000475329 SMR3BP02814 79 aaPredicted RBP8.25□□□□□ -1.09
TRAF4-210ENST00000475329 IGFL1Q6UW32 110 aa8.25□□□□□ -1.09
TRAF4-210ENST00000475329 Q8NBF4 154 aa8.25□□□□□ -1.09
TRAF4-210ENST00000475329 LINC00846Q9NV44 126 aa8.25□□□□□ -1.09
TRAF4-210ENST00000475329 C9orf153Q5TBE3 101 aa8.24□□□□□ -1.09
TRAF4-210ENST00000475329 SRRM2Q9UQ35 2752 aaKnown RBP8.24□□□□□ -1.09
TRAF4-210ENST00000475329 IGLV9-49A0A0B4J1Y8 123 aa8.23□□□□□ -1.09
TRAF4-210ENST00000475329 A0A1W2PNM2 257 aa8.23□□□□□ -1.09
TRAF4-210ENST00000475329 A0A1B0GW54 56 aa8.22□□□□□ -1.09
TRAF4-210ENST00000475329 LINC00643Q86TS7 51 aa8.21□□□□□ -1.1
TRAF4-210ENST00000475329 UBL5Q9BZL1 73 aa8.21□□□□□ -1.1
TRAF4-210ENST00000475329 ANAPC11Q9NYG5 84 aa8.21□□□□□ -1.1
TRAF4-210ENST00000475329 APOBP04114 4563 aaKnown RBP8.2□□□□□ -1.1
TRAF4-210ENST00000475329 CDK2AP2O75956 126 aa8.2□□□□□ -1.1
TRAF4-210ENST00000475329 MOBPQ13875 183 aa8.2□□□□□ -1.1
TRAF4-210ENST00000475329 SPINK6Q6UWN8 80 aa8.2□□□□□ -1.1
TRAF4-210ENST00000475329 A0A0G2JQZ4 141 aa8.19□□□□□ -1.1
TRAF4-210ENST00000475329 FAM229BQ4G0N7 80 aa8.19□□□□□ -1.1
TRAF4-210ENST00000475329 SIGMAR1Q99720 223 aa8.19□□□□□ -1.1
TRAF4-210ENST00000475329 CRYGAP11844 174 aa8.18□□□□□ -1.1
TRAF4-210ENST00000475329 MT-ATP8P03928 68 aa8.17□□□□□ -1.1
TRAF4-210ENST00000475329 Q6Q795 121 aa8.17□□□□□ -1.1
TRAF4-210ENST00000475329 Q6ZVQ6 151 aa8.17□□□□□ -1.1
TRAF4-210ENST00000475329 KRTAP10-4P60372 401 aaPredicted RBP8.16□□□□□ -1.1
TRAF4-210ENST00000475329 FAM229AH3BQW9 127 aa8.15□□□□□ -1.1
TRAF4-210ENST00000475329 PLA2G1BP04054 148 aaKnown RBP8.15□□□□□ -1.1
TRAF4-210ENST00000475329 KRTAP1-4P0C5Y4 121 aa8.15□□□□□ -1.1
TRAF4-210ENST00000475329 ATP5EP2Q5VTU8 51 aa8.15□□□□□ -1.1
TRAF4-210ENST00000475329 VPS13BQ7Z7G8 4022 aa8.13□□□□□ -1.11
TRAF4-210ENST00000475329 TRBV7-7A0A0K0K1E9 115 aa8.13□□□□□ -1.11
TRAF4-210ENST00000475329 NREPQ16612 68 aa8.13□□□□□ -1.11
TRAF4-210ENST00000475329 A0A087WSZ3 146 aa8.12□□□□□ -1.11
TRAF4-210ENST00000475329 A0A087X002 238 aa8.12□□□□□ -1.11
TRAF4-210ENST00000475329 SSBP3-AS1Q7Z2R9 100 aa8.12□□□□□ -1.11
TRAF4-210ENST00000475329 IGKV3D-7A0A0C4DH55 119 aa8.11□□□□□ -1.11
TRAF4-210ENST00000475329 KRTAP13-2Q52LG2 175 aa8.1□□□□□ -1.11
TRAF4-210ENST00000475329 Q5VSD8 79 aa8.09□□□□□ -1.11
TRAF4-210ENST00000475329 CXCL6P80162 114 aa8.08□□□□□ -1.12
TRAF4-210ENST00000475329 CD164Q04900 197 aa8.08□□□□□ -1.12
TRAF4-210ENST00000475329 HRCT1Q6UXD1 115 aa8.08□□□□□ -1.12
TRAF4-210ENST00000475329 IMUPQ9GZP8 106 aa8.08□□□□□ -1.12
TRAF4-210ENST00000475329 KRTAP17-1Q9BYP8 105 aa8.07□□□□□ -1.12
TRAF4-210ENST00000475329 SS18L2Q9UHA2 77 aa8.06□□□□□ -1.12
TRAF4-210ENST00000475329 BPY2O14599 106 aa8.05□□□□□ -1.12
TRAF4-210ENST00000475329 TYMSOSQ8TAI1 123 aa8.05□□□□□ -1.12
TRAF4-210ENST00000475329 HERC2O95714 4834 aa8.04□□□□□ -1.12
TRAF4-210ENST00000475329 PKHD1L1Q86WI1 4243 aa8.03□□□□□ -1.12
TRAF4-210ENST00000475329 SCGB1A1P11684 91 aa8.02□□□□□ -1.13
TRAF4-210ENST00000475329 PRR26Q8N8Z3 221 aa8.02□□□□□ -1.13
TRAF4-210ENST00000475329 HSPG2P98160 4391 aa8.02□□□□□ -1.13
TRAF4-210ENST00000475329 FAT1Q14517 4588 aa8.01□□□□□ -1.13
TRAF4-210ENST00000475329 HIST1H4AP62805 103 aaKnown RBP8.01□□□□□ -1.13
TRAF4-210ENST00000475329 KIAA1109Q2LD37 5005 aa8.01□□□□□ -1.13
TRAF4-210ENST00000475329 Q8N1X5 172 aa8□□□□□ -1.13
TRAF4-210ENST00000475329 LINC00472Q9H8W2 130 aa7.99□□□□□ -1.13
TRAF4-210ENST00000475329 RYR1P21817 5038 aa7.99□□□□□ -1.13
TRAF4-210ENST00000475329 J3KT08 172 aa7.98□□□□□ -1.13
TRAF4-210ENST00000475329 C4orf48Q5BLP8 95 aa7.98□□□□□ -1.13
TRAF4-210ENST00000475329 DEFB116Q30KQ4 102 aa7.97□□□□□ -1.13
TRAF4-210ENST00000475329 A0A087WVE0 104 aa7.96□□□□□ -1.14
TRAF4-210ENST00000475329 IGKV4-1P06312 121 aa7.96□□□□□ -1.14
TRAF4-210ENST00000475329 DSCR10P59022 87 aa7.96□□□□□ -1.14
TRAF4-210ENST00000475329 LINC00304Q8N9R0 145 aa7.96□□□□□ -1.14
TRAF4-210ENST00000475329 Q96NJ1 140 aa7.96□□□□□ -1.14
TRAF4-210ENST00000475329 LIMD2Q9BT23 127 aa7.96□□□□□ -1.14
TRAF4-210ENST00000475329 PCLOQ9Y6V0 5065 aa7.96□□□□□ -1.14
TRAF4-210ENST00000475329 ASB16-AS1Q495Z4 193 aa7.95□□□□□ -1.14
TRAF4-210ENST00000475329 Q8N9L7 120 aa7.95□□□□□ -1.14
TRAF4-210ENST00000475329 FAM236AA0A1B0GUQ0 79 aa7.94□□□□□ -1.14
TRAF4-210ENST00000475329 FAM236BA0A1B0GV22 79 aa7.94□□□□□ -1.14
TRAF4-210ENST00000475329 Q5XG85 94 aa7.94□□□□□ -1.14
TRAF4-210ENST00000475329 SPAG11AQ6PDA7 123 aa7.94□□□□□ -1.14
TRAF4-210ENST00000475329 SPINK1P00995 79 aa7.93□□□□□ -1.14
TRAF4-210ENST00000475329 K7EQZ3 153 aa7.92□□□□□ -1.14
TRAF4-210ENST00000475329 A8MWP4 228 aa7.91□□□□□ -1.14
TRAF4-210ENST00000475329 RPS29P62273 56 aaKnown RBP7.91□□□□□ -1.14
TRAF4-210ENST00000475329 NDUFB1O75438 58 aa7.89□□□□□ -1.15
TRAF4-210ENST00000475329 PRR15Q8IV56 129 aa7.88□□□□□ -1.15
TRAF4-210ENST00000475329 ATOX1O00244 68 aa7.86□□□□□ -1.15
TRAF4-210ENST00000475329 C1orf195Q5TG92 126 aa7.86□□□□□ -1.15
TRAF4-210ENST00000475329 KRTAP4-5Q9BYR2 181 aa7.86□□□□□ -1.15
TRAF4-210ENST00000475329 A0A1B0GVX0 72 aa7.84□□□□□ -1.15
TRAF4-210ENST00000475329 HCG22E2RYF7 251 aa7.84□□□□□ -1.15
TRAF4-210ENST00000475329 KRTAP10-8P60410 259 aa7.84□□□□□ -1.15
TRAF4-210ENST00000475329 ANAPC13Q9BS18 74 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms