RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 MEIG1Q5JSS6 88 aa3.48□□□□□ -1.85
CPSF7-210ENST00000474684 IGLV5-37A0A075B6J1 123 aa3.47□□□□□ -1.85
CPSF7-210ENST00000474684 IGKV2-28A0A075B6P5 120 aa3.47□□□□□ -1.85
CPSF7-210ENST00000474684 IGKV2D-26A0A0A0MRZ7 120 aa3.47□□□□□ -1.85
CPSF7-210ENST00000474684 IGLV5-39A0A0G2JS06 123 aa3.47□□□□□ -1.85
CPSF7-210ENST00000474684 C11orf86A6NJI1 115 aa3.47□□□□□ -1.85
CPSF7-210ENST00000474684 ATOX1O00244 68 aa3.47□□□□□ -1.85
CPSF7-210ENST00000474684 IGKV2D-28P01615 120 aa3.47□□□□□ -1.85
CPSF7-210ENST00000474684 TMEM258P61165 79 aa3.47□□□□□ -1.85
CPSF7-210ENST00000474684 RETNLBQ9BQ08 111 aa3.47□□□□□ -1.85
CPSF7-210ENST00000474684 TCL1BO95988 128 aa3.46□□□□□ -1.86
CPSF7-210ENST00000474684 VPREB1P12018 145 aa3.46□□□□□ -1.86
CPSF7-210ENST00000474684 PFN2P35080 140 aa3.46□□□□□ -1.86
CPSF7-210ENST00000474684 RPL28P46779 137 aaKnown RBP3.46□□□□□ -1.86
CPSF7-210ENST00000474684 LINC00643Q86TS7 51 aa3.46□□□□□ -1.86
CPSF7-210ENST00000474684 C3orf22Q8N5N4 141 aa3.46□□□□□ -1.86
CPSF7-210ENST00000474684 PLEKHB2Q96CS7 222 aa3.46□□□□□ -1.86
CPSF7-210ENST00000474684 ZNF625Q96I27 306 aaPredicted RBP3.46□□□□□ -1.86
CPSF7-210ENST00000474684 PPDPFQ9H3Y8 114 aa3.46□□□□□ -1.86
CPSF7-210ENST00000474684 A0A0J9YXY3 114 aa3.45□□□□□ -1.86
CPSF7-210ENST00000474684 C9JAW5 83 aa3.45□□□□□ -1.86
CPSF7-210ENST00000474684 CFC1BP0CG36 223 aa3.45□□□□□ -1.86
CPSF7-210ENST00000474684 CFC1P0CG37 223 aa3.45□□□□□ -1.86
CPSF7-210ENST00000474684 CRYGAP11844 174 aa3.45□□□□□ -1.86
CPSF7-210ENST00000474684 LGALS3P17931 250 aaKnown RBP3.45□□□□□ -1.86
CPSF7-210ENST00000474684 C9orf153Q5TBE3 101 aa3.45□□□□□ -1.86
CPSF7-210ENST00000474684 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
CPSF7-210ENST00000474684 NKAPP1Q8N9T2 125 aa3.45□□□□□ -1.86
CPSF7-210ENST00000474684 SND1-IT1Q9HBX3 110 aa3.45□□□□□ -1.86
CPSF7-210ENST00000474684 M0R378 163 aa3.44□□□□□ -1.86
CPSF7-210ENST00000474684 UBE2AP49459 152 aa3.44□□□□□ -1.86
CPSF7-210ENST00000474684 DAND5Q8N907 189 aa3.44□□□□□ -1.86
CPSF7-210ENST00000474684 TYMSOSQ8TAI1 123 aa3.44□□□□□ -1.86
CPSF7-210ENST00000474684 A0A0U1RRA0 63 aa3.43□□□□□ -1.86
CPSF7-210ENST00000474684 CCDC179H3BU77 68 aa3.43□□□□□ -1.86
CPSF7-210ENST00000474684 TIMM17BO60830 172 aa3.43□□□□□ -1.86
CPSF7-210ENST00000474684 COX7CP15954 63 aa3.43□□□□□ -1.86
CPSF7-210ENST00000474684 FAM19A1Q7Z5A9 133 aa3.43□□□□□ -1.86
CPSF7-210ENST00000474684 J3QQQ9 107 aa3.42□□□□□ -1.86
CPSF7-210ENST00000474684 LEPROTO15243 131 aa3.42□□□□□ -1.86
CPSF7-210ENST00000474684 Q1RN00 199 aa3.42□□□□□ -1.86
CPSF7-210ENST00000474684 S100A7L2Q5SY68 101 aa3.42□□□□□ -1.86
CPSF7-210ENST00000474684 ATP5EP2Q5VTU8 51 aa3.42□□□□□ -1.86
CPSF7-210ENST00000474684 GAGE2AQ6NT46 116 aa3.42□□□□□ -1.86
CPSF7-210ENST00000474684 LINC00304Q8N9R0 145 aa3.42□□□□□ -1.86
CPSF7-210ENST00000474684 TMEM223A0PJW6 202 aa3.41□□□□□ -1.86
CPSF7-210ENST00000474684 LST1O00453 97 aa3.41□□□□□ -1.86
CPSF7-210ENST00000474684 NDUFC2O95298 119 aa3.41□□□□□ -1.86
CPSF7-210ENST00000474684 TRACP01848 142 aa3.41□□□□□ -1.86
CPSF7-210ENST00000474684 TSPEAR-AS2P59090 65 aa3.41□□□□□ -1.86
CPSF7-210ENST00000474684 FAM229BQ4G0N7 80 aa3.41□□□□□ -1.86
CPSF7-210ENST00000474684 HIGD2AQ9BW72 106 aa3.41□□□□□ -1.86
CPSF7-210ENST00000474684 FAM236AA0A1B0GUQ0 79 aa3.4□□□□□ -1.87
CPSF7-210ENST00000474684 FAM236BA0A1B0GV22 79 aa3.4□□□□□ -1.87
CPSF7-210ENST00000474684 NCR3O14931 201 aa3.4□□□□□ -1.87
CPSF7-210ENST00000474684 TTTY13Q9BZ97 58 aa3.4□□□□□ -1.87
CPSF7-210ENST00000474684 ATP5EP56381 51 aaPredicted RBP3.39□□□□□ -1.87
CPSF7-210ENST00000474684 LINC00158P58513 81 aa3.39□□□□□ -1.87
CPSF7-210ENST00000474684 HIST1H4AP62805 103 aaKnown RBP3.39□□□□□ -1.87
CPSF7-210ENST00000474684 COX17Q14061 63 aa3.39□□□□□ -1.87
CPSF7-210ENST00000474684 KRTAP15-1Q3LI76 137 aa3.39□□□□□ -1.87
CPSF7-210ENST00000474684 MIR7-3HGQ8N6C7 128 aa3.39□□□□□ -1.87
CPSF7-210ENST00000474684 SERP2Q8N6R1 65 aa3.39□□□□□ -1.87
CPSF7-210ENST00000474684 SPRR4Q96PI1 79 aa3.39□□□□□ -1.87
CPSF7-210ENST00000474684 TEX49A0A1B0GTD5 131 aa3.38□□□□□ -1.87
CPSF7-210ENST00000474684 IGLV7-46A0A075B6I9 117 aa3.37□□□□□ -1.87
CPSF7-210ENST00000474684 TRBV10-3A0A0K0K1G6 114 aa3.37□□□□□ -1.87
CPSF7-210ENST00000474684 KRTAP4-16G5E9R7 235 aaPredicted RBP3.37□□□□□ -1.87
CPSF7-210ENST00000474684 PRYO14603 147 aa3.37□□□□□ -1.87
CPSF7-210ENST00000474684 TRIAP1O43715 76 aa3.37□□□□□ -1.87
CPSF7-210ENST00000474684 SPRR1AP35321 89 aa3.37□□□□□ -1.87
CPSF7-210ENST00000474684 TPRXLQ17RH7 258 aa3.37□□□□□ -1.87
CPSF7-210ENST00000474684 Q6JHZ5 121 aa3.37□□□□□ -1.87
CPSF7-210ENST00000474684 SMCR5Q8TEV8 140 aa3.37□□□□□ -1.87
CPSF7-210ENST00000474684 LAMTOR3Q9UHA4 124 aa3.37□□□□□ -1.87
CPSF7-210ENST00000474684 PRO0628Q9UI54 55 aa3.37□□□□□ -1.87
CPSF7-210ENST00000474684 hADV29S1A0JD25 119 aa3.36□□□□□ -1.87
CPSF7-210ENST00000474684 NDUFC1O43677 76 aa3.36□□□□□ -1.87
CPSF7-210ENST00000474684 ERC2-IT1O76042 136 aa3.36□□□□□ -1.87
CPSF7-210ENST00000474684 DNAL4O96015 105 aa3.36□□□□□ -1.87
CPSF7-210ENST00000474684 SFTA2Q6UW10 78 aa3.36□□□□□ -1.87
CPSF7-210ENST00000474684 Q8NBF4 154 aa3.36□□□□□ -1.87
CPSF7-210ENST00000474684 NDUFA12Q9UI09 145 aa3.36□□□□□ -1.87
CPSF7-210ENST00000474684 H3BQ85 93 aa3.35□□□□□ -1.87
CPSF7-210ENST00000474684 NPC2P61916 151 aa3.35□□□□□ -1.87
CPSF7-210ENST00000474684 SOSTDC1Q6X4U4 206 aa3.35□□□□□ -1.87
CPSF7-210ENST00000474684 MUSTN1Q8IVN3 82 aa3.35□□□□□ -1.87
CPSF7-210ENST00000474684 LINC00337Q8N6G1 96 aa3.35□□□□□ -1.87
CPSF7-210ENST00000474684 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
CPSF7-210ENST00000474684 TRAV13-2A0A0B4J235 113 aa3.34□□□□□ -1.87
CPSF7-210ENST00000474684 ETDCA0A1B0GVM5 59 aa3.34□□□□□ -1.87
CPSF7-210ENST00000474684 H0YGX0 51 aa3.34□□□□□ -1.87
CPSF7-210ENST00000474684 MOBPQ13875 183 aa3.34□□□□□ -1.87
CPSF7-210ENST00000474684 KRTAP13-3Q3SY46 172 aa3.34□□□□□ -1.87
CPSF7-210ENST00000474684 Q9BRP9 147 aa3.34□□□□□ -1.87
CPSF7-210ENST00000474684 KCNQ1DNQ9H478 68 aa3.34□□□□□ -1.87
CPSF7-210ENST00000474684 SERP1Q9Y6X1 66 aa3.34□□□□□ -1.87
CPSF7-210ENST00000474684 A0A0U1RQV1 116 aa3.33□□□□□ -1.88
CPSF7-210ENST00000474684 LINC00483Q53H64 154 aa3.33□□□□□ -1.88
CPSF7-210ENST00000474684 ZNF706Q9Y5V0 76 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms