RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 CASC10Q5T4H9 136 aa2.94□□□□□ -1.94
U2SURP-208ENST00000473835 PHF5AQ7RTV0 110 aaKnown RBP2.94□□□□□ -1.94
U2SURP-208ENST00000473835 NKAPP1Q8N9T2 125 aa2.94□□□□□ -1.94
U2SURP-208ENST00000473835 UBE2AP49459 152 aa2.94□□□□□ -1.94
U2SURP-208ENST00000473835 LIMD2Q9BT23 127 aa2.94□□□□□ -1.94
U2SURP-208ENST00000473835 APOC4P55056 127 aa2.93□□□□□ -1.94
U2SURP-208ENST00000473835 PRR15LQ9BU68 103 aa2.93□□□□□ -1.94
U2SURP-208ENST00000473835 TENM2Q9NT68 2774 aa2.93□□□□□ -1.94
U2SURP-208ENST00000473835 CHKB-CPT1BH3BT56 60 aa2.93□□□□□ -1.94
U2SURP-208ENST00000473835 ASB16-AS1Q495Z4 193 aa2.93□□□□□ -1.94
U2SURP-208ENST00000473835 LINC01556Q5JQF7 62 aa2.93□□□□□ -1.94
U2SURP-208ENST00000473835 ATP11AUNQ6ZP68 121 aa2.93□□□□□ -1.94
U2SURP-208ENST00000473835 LINC00472Q9H8W2 130 aa2.93□□□□□ -1.94
U2SURP-208ENST00000473835 HECTD1Q9ULT8 2610 aa2.92□□□□□ -1.94
U2SURP-208ENST00000473835 SETD2Q9BYW2 2564 aaPredicted RBP2.92□□□□□ -1.94
U2SURP-208ENST00000473835 H3BPC8 53 aa2.92□□□□□ -1.94
U2SURP-208ENST00000473835 ALMS1Q8TCU4 4167 aa2.92□□□□□ -1.94
U2SURP-208ENST00000473835 H0Y9P7 68 aa2.92□□□□□ -1.94
U2SURP-208ENST00000473835 FASNP49327 2511 aaKnown RBP2.92□□□□□ -1.94
U2SURP-208ENST00000473835 IGLV7-46A0A075B6I9 117 aa2.92□□□□□ -1.94
U2SURP-208ENST00000473835 A0A087WSZ3 146 aa2.92□□□□□ -1.94
U2SURP-208ENST00000473835 COA5Q86WW8 74 aa2.92□□□□□ -1.94
U2SURP-208ENST00000473835 RETNQ9HD89 108 aa2.92□□□□□ -1.94
U2SURP-208ENST00000473835 SRRM2Q9UQ35 2752 aaKnown RBP2.92□□□□□ -1.94
U2SURP-208ENST00000473835 MP68P56378 58 aa2.92□□□□□ -1.94
U2SURP-208ENST00000473835 MRPL55Q7Z7F7 128 aaKnown RBP2.92□□□□□ -1.94
U2SURP-208ENST00000473835 SONP18583 2426 aaKnown RBP2.91□□□□□ -1.94
U2SURP-208ENST00000473835 CDC42SE1Q9NRR8 79 aa2.91□□□□□ -1.94
U2SURP-208ENST00000473835 MMP24-AS1A0A0U1RRL7 71 aa2.91□□□□□ -1.94
U2SURP-208ENST00000473835 ITPR2Q14571 2701 aa2.91□□□□□ -1.94
U2SURP-208ENST00000473835 MTORP42345 2549 aa2.91□□□□□ -1.94
U2SURP-208ENST00000473835 MOBPQ13875 183 aa2.91□□□□□ -1.94
U2SURP-208ENST00000473835 HIVEP2P31629 2446 aa2.91□□□□□ -1.94
U2SURP-208ENST00000473835 KRTAP11-1Q8IUC1 163 aa2.91□□□□□ -1.94
U2SURP-208ENST00000473835 NOTCH2Q04721 2471 aa2.9□□□□□ -1.94
U2SURP-208ENST00000473835 CASC2Q6XLA1 102 aa2.9□□□□□ -1.94
U2SURP-208ENST00000473835 REG3GQ6UW15 175 aa2.9□□□□□ -1.94
U2SURP-208ENST00000473835 LINC01558Q9Y6Z2 57 aa2.9□□□□□ -1.94
U2SURP-208ENST00000473835 A8MWP4 228 aa2.9□□□□□ -1.95
U2SURP-208ENST00000473835 Q96NJ1 140 aa2.9□□□□□ -1.95
U2SURP-208ENST00000473835 TENM3Q9P273 2699 aa2.9□□□□□ -1.95
U2SURP-208ENST00000473835 DNAH10OSP0CZ25 163 aa2.9□□□□□ -1.95
U2SURP-208ENST00000473835 FBN1P35555 2871 aaKnown RBP2.89□□□□□ -1.95
U2SURP-208ENST00000473835 SPINK7P58062 85 aa2.89□□□□□ -1.95
U2SURP-208ENST00000473835 SPRR1BP22528 89 aa2.89□□□□□ -1.95
U2SURP-208ENST00000473835 PRLHP81277 87 aa2.88□□□□□ -1.95
U2SURP-208ENST00000473835 SPTSSBQ8NFR3 76 aa2.88□□□□□ -1.95
U2SURP-208ENST00000473835 HUWE1Q7Z6Z7 4374 aaKnown RBP2.88□□□□□ -1.95
U2SURP-208ENST00000473835 NDUFS5O43920 106 aa2.88□□□□□ -1.95
U2SURP-208ENST00000473835 Q6ZR54 194 aa2.88□□□□□ -1.95
U2SURP-208ENST00000473835 SMR3AQ99954 134 aa2.88□□□□□ -1.95
U2SURP-208ENST00000473835 DNAH8Q96JB1 4490 aa2.88□□□□□ -1.95
U2SURP-208ENST00000473835 DNAH7Q8WXX0 4024 aa2.87□□□□□ -1.95
U2SURP-208ENST00000473835 HRES1P13985 223 aa2.87□□□□□ -1.95
U2SURP-208ENST00000473835 DYNC2H1Q8NCM8 4307 aaKnown RBP2.87□□□□□ -1.95
U2SURP-208ENST00000473835 C7orf65Q6ZTY9 151 aa2.87□□□□□ -1.95
U2SURP-208ENST00000473835 A6NED7 52 aa2.87□□□□□ -1.95
U2SURP-208ENST00000473835 ACANP16112 2415 aa2.87□□□□□ -1.95
U2SURP-208ENST00000473835 KRTAP10-11P60412 298 aa2.86□□□□□ -1.95
U2SURP-208ENST00000473835 A0A096LNI7 61 aa2.86□□□□□ -1.95
U2SURP-208ENST00000473835 INAFM1C9JVW0 142 aa2.86□□□□□ -1.95
U2SURP-208ENST00000473835 SPAG11AQ6PDA7 123 aa2.86□□□□□ -1.95
U2SURP-208ENST00000473835 IGKV2-24A0A0C4DH68 120 aa2.86□□□□□ -1.95
U2SURP-208ENST00000473835 CHTF8P0CG12 524 aa2.85□□□□□ -1.95
U2SURP-208ENST00000473835 BAHCC1Q9P281 2608 aa2.85□□□□□ -1.95
U2SURP-208ENST00000473835 KRTAP13-3Q3SY46 172 aa2.85□□□□□ -1.95
U2SURP-208ENST00000473835 PCOTHQ58A44 107 aa2.85□□□□□ -1.95
U2SURP-208ENST00000473835 C11orf45Q8TAV5 145 aa2.85□□□□□ -1.95
U2SURP-208ENST00000473835 KRTAP13-1Q8IUC0 172 aa2.85□□□□□ -1.95
U2SURP-208ENST00000473835 FRAS1Q86XX4 4008 aa2.84□□□□□ -1.95
U2SURP-208ENST00000473835 H0Y9J4 135 aa2.84□□□□□ -1.95
U2SURP-208ENST00000473835 TEP1Q99973 2627 aaKnown RBP2.84□□□□□ -1.96
U2SURP-208ENST00000473835 C8orf87E5RJ46 101 aa2.83□□□□□ -1.96
U2SURP-208ENST00000473835 DEFB131BA0A096LNP1 70 aa2.83□□□□□ -1.96
U2SURP-208ENST00000473835 KRTAP24-1Q3LI83 254 aa2.83□□□□□ -1.96
U2SURP-208ENST00000473835 KRTAP1-5Q9BYS1 174 aa2.83□□□□□ -1.96
U2SURP-208ENST00000473835 ADM2Q7Z4H4 148 aa2.83□□□□□ -1.96
U2SURP-208ENST00000473835 A0A087X002 238 aa2.83□□□□□ -1.96
U2SURP-208ENST00000473835 NOTCH2NLQ7Z3S9 236 aa2.83□□□□□ -1.96
U2SURP-208ENST00000473835 LINC00313P59037 77 aa2.83□□□□□ -1.96
U2SURP-208ENST00000473835 VPS13DQ5THJ4 4388 aa2.82□□□□□ -1.96
U2SURP-208ENST00000473835 K7EIL1 84 aa2.82□□□□□ -1.96
U2SURP-208ENST00000473835 C8orf17Q9NRJ1 99 aa2.82□□□□□ -1.96
U2SURP-208ENST00000473835 FLNBO75369 2602 aaKnown RBP2.82□□□□□ -1.96
U2SURP-208ENST00000473835 PRAC1Q96KF2 57 aa2.82□□□□□ -1.96
U2SURP-208ENST00000473835 TP53AIP1Q9HCN2 124 aa2.82□□□□□ -1.96
U2SURP-208ENST00000473835 MAST4O15021 2626 aa2.81□□□□□ -1.96
U2SURP-208ENST00000473835 ATRQ13535 2644 aa2.81□□□□□ -1.96
U2SURP-208ENST00000473835 COL7A1Q02388 2944 aa2.81□□□□□ -1.96
U2SURP-208ENST00000473835 HECTD4Q9Y4D8 3996 aa2.81□□□□□ -1.96
U2SURP-208ENST00000473835 PLECQ15149 4684 aaKnown RBP2.81□□□□□ -1.96
U2SURP-208ENST00000473835 Q5W150 140 aa2.81□□□□□ -1.96
U2SURP-208ENST00000473835 OXLD1Q5BKU9 147 aa2.8□□□□□ -1.96
U2SURP-208ENST00000473835 DNAH17Q9UFH2 4485 aa2.8□□□□□ -1.96
U2SURP-208ENST00000473835 PLA2G1BP04054 148 aaKnown RBP2.8□□□□□ -1.96
U2SURP-208ENST00000473835 RTL8CO15255 209 aa2.8□□□□□ -1.96
U2SURP-208ENST00000473835 PRR26Q8N8Z3 221 aa2.8□□□□□ -1.96
U2SURP-208ENST00000473835 PANO1I0J062 215 aa2.8□□□□□ -1.96
U2SURP-208ENST00000473835 F8P00451 2351 aa2.79□□□□□ -1.96
U2SURP-208ENST00000473835 A0A1B0GVX0 72 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms