RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	IFITM1	P13164	125 aa		4.94	□□□□□ -1.62
CHEK2-223	ENST00000472807	TAL2	Q16559	108 aa		4.94	□□□□□ -1.62
CHEK2-223	ENST00000472807		Q6ZVH6	145 aa		4.94	□□□□□ -1.62
CHEK2-223	ENST00000472807	DEFB105A	Q8NG35	78 aa		4.94	□□□□□ -1.62
CHEK2-223	ENST00000472807	TEX49	A0A1B0GTD5	131 aa		4.93	□□□□□ -1.62
CHEK2-223	ENST00000472807		A0A1B0GWB2	263 aa		4.93	□□□□□ -1.62
CHEK2-223	ENST00000472807		A6NDN8	102 aa		4.93	□□□□□ -1.62
CHEK2-223	ENST00000472807		Q1RN00	199 aa		4.93	□□□□□ -1.62
CHEK2-223	ENST00000472807	ANKRD39	Q53RE8	183 aa		4.93	□□□□□ -1.62
CHEK2-223	ENST00000472807	LINC01547	P58512	204 aa	Predicted RBP	4.92	□□□□□ -1.62
CHEK2-223	ENST00000472807	CD164	Q04900	197 aa		4.92	□□□□□ -1.62
CHEK2-223	ENST00000472807	ATOH7	Q8N100	152 aa		4.92	□□□□□ -1.62
CHEK2-223	ENST00000472807	PRO1933	Q9H354	126 aa		4.92	□□□□□ -1.62
CHEK2-223	ENST00000472807	TRAV13-2	A0A0B4J235	113 aa		4.91	□□□□□ -1.62
CHEK2-223	ENST00000472807		A4D1N5	150 aa		4.91	□□□□□ -1.62
CHEK2-223	ENST00000472807		H7C2G1	150 aa		4.91	□□□□□ -1.62
CHEK2-223	ENST00000472807	PCP2	Q8IVA1	136 aa		4.91	□□□□□ -1.62
CHEK2-223	ENST00000472807	KRTAP4-1	Q9BYQ7	146 aa		4.91	□□□□□ -1.62
CHEK2-223	ENST00000472807	MUSTN1	Q8IVN3	82 aa		4.9	□□□□□ -1.63
CHEK2-223	ENST00000472807	VAMP8	Q9BV40	100 aa		4.9	□□□□□ -1.63
CHEK2-223	ENST00000472807	NHP2	Q9NX24	153 aa	Known RBP	4.9	□□□□□ -1.63
CHEK2-223	ENST00000472807	IGLV5-48	A0A075B6I7	105 aa		4.89	□□□□□ -1.63
CHEK2-223	ENST00000472807	C9orf92	A6NGG3	77 aa		4.89	□□□□□ -1.63
CHEK2-223	ENST00000472807	SMIM29	Q86T20	159 aa		4.88	□□□□□ -1.63
CHEK2-223	ENST00000472807	HSBP1L1	C9JCN9	74 aa		4.87	□□□□□ -1.63
CHEK2-223	ENST00000472807		Q5XG85	94 aa		4.87	□□□□□ -1.63
CHEK2-223	ENST00000472807	SMIM11B	Q8TCY0	68 aa		4.87	□□□□□ -1.63
CHEK2-223	ENST00000472807		F8WEM9	126 aa		4.86	□□□□□ -1.63
CHEK2-223	ENST00000472807	VAMP3	Q15836	100 aa		4.86	□□□□□ -1.63
CHEK2-223	ENST00000472807	KRTAP9-3	Q9BYQ3	159 aa		4.86	□□□□□ -1.63
CHEK2-223	ENST00000472807	IGLV8-61	A0A075B6I0	122 aa		4.85	□□□□□ -1.63
CHEK2-223	ENST00000472807	SPATA45	Q537H7	98 aa		4.85	□□□□□ -1.63
CHEK2-223	ENST00000472807	PCOTH	Q58A44	107 aa		4.85	□□□□□ -1.63
CHEK2-223	ENST00000472807	PAM16	Q9Y3D7	125 aa		4.85	□□□□□ -1.63
CHEK2-223	ENST00000472807		A0A0G2JQZ4	141 aa		4.84	□□□□□ -1.63
CHEK2-223	ENST00000472807	TCL1B	O95988	128 aa		4.84	□□□□□ -1.63
CHEK2-223	ENST00000472807	C1orf195	Q5TG92	126 aa		4.84	□□□□□ -1.63
CHEK2-223	ENST00000472807	C14orf144	Q96I85	54 aa		4.84	□□□□□ -1.63
CHEK2-223	ENST00000472807	UQCR10	Q9UDW1	63 aa		4.84	□□□□□ -1.63
CHEK2-223	ENST00000472807		H3BS24	57 aa		4.83	□□□□□ -1.64
CHEK2-223	ENST00000472807	hADV29S1	A0JD25	119 aa		4.82	□□□□□ -1.64
CHEK2-223	ENST00000472807	LINC00575	Q6W349	94 aa		4.82	□□□□□ -1.64
CHEK2-223	ENST00000472807		Q6ZQY7	126 aa		4.82	□□□□□ -1.64
CHEK2-223	ENST00000472807		M0R143	59 aa		4.81	□□□□□ -1.64
CHEK2-223	ENST00000472807		Q6JHZ5	121 aa		4.81	□□□□□ -1.64
CHEK2-223	ENST00000472807	CLEC2B	Q92478	149 aa		4.8	□□□□□ -1.64
CHEK2-223	ENST00000472807	DLEU1	O43261	78 aa		4.79	□□□□□ -1.64
CHEK2-223	ENST00000472807	COX8A	P10176	69 aa		4.79	□□□□□ -1.64
CHEK2-223	ENST00000472807	RPL37	P61927	97 aa	Known RBP	4.79	□□□□□ -1.64
CHEK2-223	ENST00000472807	BVES-AS1	Q5T3Y7	98 aa		4.79	□□□□□ -1.64
CHEK2-223	ENST00000472807	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.79	□□□□□ -1.64
CHEK2-223	ENST00000472807	HIST1H4G	Q99525	98 aa		4.79	□□□□□ -1.64
CHEK2-223	ENST00000472807	FLG	P20930	4061 aa	Predicted RBP	4.79	□□□□□ -1.64
CHEK2-223	ENST00000472807	TRBV7-7	A0A0K0K1E9	115 aa		4.78	□□□□□ -1.64
CHEK2-223	ENST00000472807	KRTAP19-2	Q3LHN2	52 aa		4.78	□□□□□ -1.64
CHEK2-223	ENST00000472807	KRTAP5-3	Q6L8H2	238 aa		4.78	□□□□□ -1.64
CHEK2-223	ENST00000472807	PPDPFL	Q8WWR9	84 aa		4.78	□□□□□ -1.64
CHEK2-223	ENST00000472807	SNHG12	Q9BXW3	62 aa		4.78	□□□□□ -1.64
CHEK2-223	ENST00000472807	FSIP2	Q5CZC0	6907 aa		4.78	□□□□□ -1.64
CHEK2-223	ENST00000472807	CFC1B	P0CG36	223 aa		4.77	□□□□□ -1.65
CHEK2-223	ENST00000472807	IGFL1	Q6UW32	110 aa		4.77	□□□□□ -1.65
CHEK2-223	ENST00000472807	MT1H	P80294	61 aa		4.76	□□□□□ -1.65
CHEK2-223	ENST00000472807	OCIAD2	Q56VL3	154 aa		4.76	□□□□□ -1.65
CHEK2-223	ENST00000472807	COL5A1-AS1	Q5SY13	56 aa		4.76	□□□□□ -1.65
CHEK2-223	ENST00000472807	SNCG	O76070	127 aa		4.75	□□□□□ -1.65
CHEK2-223	ENST00000472807		H3BUT2	72 aa		4.74	□□□□□ -1.65
CHEK2-223	ENST00000472807	COX6B2	Q6YFQ2	88 aa		4.74	□□□□□ -1.65
CHEK2-223	ENST00000472807	RAB37	Q96AX2	223 aa		4.74	□□□□□ -1.65
CHEK2-223	ENST00000472807	HIGD1B	Q9P298	99 aa		4.74	□□□□□ -1.65
CHEK2-223	ENST00000472807	OBSCN-AS1	Q96MR7	158 aa		4.73	□□□□□ -1.65
CHEK2-223	ENST00000472807	SS18L2	Q9UHA2	77 aa		4.73	□□□□□ -1.65
CHEK2-223	ENST00000472807		M0R2T5	61 aa		4.72	□□□□□ -1.65
CHEK2-223	ENST00000472807	LST1	O00453	97 aa		4.72	□□□□□ -1.65
CHEK2-223	ENST00000472807	CFC1	P0CG37	223 aa		4.72	□□□□□ -1.65
CHEK2-223	ENST00000472807	HSD52	Q0P140	79 aa		4.72	□□□□□ -1.65
CHEK2-223	ENST00000472807	C2orf91	Q6ZV80	131 aa		4.72	□□□□□ -1.65
CHEK2-223	ENST00000472807		A0A0B4J2C4	111 aa		4.71	□□□□□ -1.66
CHEK2-223	ENST00000472807		H0YGX0	51 aa		4.71	□□□□□ -1.66
CHEK2-223	ENST00000472807	ATP11AUN	Q6ZP68	121 aa		4.71	□□□□□ -1.66
CHEK2-223	ENST00000472807		Q75L30	129 aa		4.71	□□□□□ -1.66
CHEK2-223	ENST00000472807		A0A1B0GV90	55 aa		4.7	□□□□□ -1.66
CHEK2-223	ENST00000472807	BATF	Q16520	125 aa		4.7	□□□□□ -1.66
CHEK2-223	ENST00000472807		Q6Q795	121 aa		4.7	□□□□□ -1.66
CHEK2-223	ENST00000472807	NDUFV3	P56181	108 aa	Known RBP	4.69	□□□□□ -1.66
CHEK2-223	ENST00000472807	KRTAP10-6	P60371	365 aa	Predicted RBP	4.69	□□□□□ -1.66
CHEK2-223	ENST00000472807	FAM218A	Q96MZ4	157 aa		4.69	□□□□□ -1.66
CHEK2-223	ENST00000472807	TEN1	Q86WV5	123 aa		4.68	□□□□□ -1.66
CHEK2-223	ENST00000472807		Q96NJ1	140 aa		4.68	□□□□□ -1.66
CHEK2-223	ENST00000472807	CRCT1	Q9UGL9	99 aa		4.68	□□□□□ -1.66
CHEK2-223	ENST00000472807		A0A1B0GX51	115 aa		4.67	□□□□□ -1.66
CHEK2-223	ENST00000472807	CEND1	Q8N111	149 aa		4.67	□□□□□ -1.66
CHEK2-223	ENST00000472807		A0A087WSZ3	146 aa		4.66	□□□□□ -1.66
CHEK2-223	ENST00000472807		H3BMG7	143 aa		4.66	□□□□□ -1.66
CHEK2-223	ENST00000472807	FABP2	P12104	132 aa		4.66	□□□□□ -1.66
CHEK2-223	ENST00000472807	PRO1854	Q9UHT4	67 aa		4.66	□□□□□ -1.66
CHEK2-223	ENST00000472807	TAX1BP3	O14907	124 aa		4.65	□□□□□ -1.67
CHEK2-223	ENST00000472807	C20orf166-AS1	Q96NR2	134 aa		4.64	□□□□□ -1.67
CHEK2-223	ENST00000472807	C9orf118	A6NHY6	69 aa		4.63	□□□□□ -1.67
CHEK2-223	ENST00000472807	TRIAP1	O43715	76 aa		4.63	□□□□□ -1.67
CHEK2-223	ENST00000472807	DNAL4	O96015	105 aa		4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms