RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 FAM218AQ96MZ4 157 aa11.63□□□□□ -0.55
SF1-213ENST00000472725 C4orf48Q5BLP8 95 aa11.62□□□□□ -0.55
SF1-213ENST00000472725 SMIM29Q86T20 159 aa11.62□□□□□ -0.55
SF1-213ENST00000472725 H3BQ85 93 aa11.58□□□□□ -0.56
SF1-213ENST00000472725 SPINK1P00995 79 aa11.58□□□□□ -0.56
SF1-213ENST00000472725 SCGB1C2P0DMR2 95 aa11.58□□□□□ -0.56
SF1-213ENST00000472725 CLEC2BQ92478 149 aa11.57□□□□□ -0.56
SF1-213ENST00000472725 F8WEM9 126 aa11.56□□□□□ -0.56
SF1-213ENST00000472725 DNAL4O96015 105 aa11.56□□□□□ -0.56
SF1-213ENST00000472725 RPS29P62273 56 aaKnown RBP11.56□□□□□ -0.56
SF1-213ENST00000472725 BATFQ16520 125 aa11.56□□□□□ -0.56
SF1-213ENST00000472725 TRACP01848 142 aa11.54□□□□□ -0.56
SF1-213ENST00000472725 SNHG12Q9BXW3 62 aa11.54□□□□□ -0.56
SF1-213ENST00000472725 LYRM7Q5U5X0 104 aa11.53□□□□□ -0.56
SF1-213ENST00000472725 IGLV8-61A0A075B6I0 122 aa11.52□□□□□ -0.57
SF1-213ENST00000472725 LST1O00453 97 aa11.52□□□□□ -0.57
SF1-213ENST00000472725 CD164Q04900 197 aa11.52□□□□□ -0.57
SF1-213ENST00000472725 HERC1Q15751 4861 aa11.52□□□□□ -0.57
SF1-213ENST00000472725 ORMDL1Q9P0S3 153 aa11.51□□□□□ -0.57
SF1-213ENST00000472725 Q6JHZ5 121 aa11.5□□□□□ -0.57
SF1-213ENST00000472725 TMEM256-PLSCR3K7ERE1 68 aa11.47□□□□□ -0.57
SF1-213ENST00000472725 NDUFV3P56181 108 aaKnown RBP11.46□□□□□ -0.57
SF1-213ENST00000472725 TRBV20-1A0A075B6N2 111 aa11.45□□□□□ -0.58
SF1-213ENST00000472725 C9orf118A6NHY6 69 aa11.45□□□□□ -0.58
SF1-213ENST00000472725 FABP2P12104 132 aa11.45□□□□□ -0.58
SF1-213ENST00000472725 ATXN8Q156A1 80 aa11.45□□□□□ -0.58
SF1-213ENST00000472725 NAA38Q9BRA0 125 aaKnown RBP11.44□□□□□ -0.58
SF1-213ENST00000472725 H3BUT2 72 aa11.43□□□□□ -0.58
SF1-213ENST00000472725 TAX1BP3O14907 124 aa11.43□□□□□ -0.58
SF1-213ENST00000472725 LIMD2Q9BT23 127 aa11.43□□□□□ -0.58
SF1-213ENST00000472725 TCL1BO95988 128 aa11.41□□□□□ -0.58
SF1-213ENST00000472725 UBE2V1Q13404 147 aa11.41□□□□□ -0.58
SF1-213ENST00000472725 COL5A1-AS1Q5SY13 56 aa11.41□□□□□ -0.58
SF1-213ENST00000472725 Q5XG85 94 aa11.4□□□□□ -0.58
SF1-213ENST00000472725 IGFL1Q6UW32 110 aa11.39□□□□□ -0.59
SF1-213ENST00000472725 H3BMG7 143 aa11.38□□□□□ -0.59
SF1-213ENST00000472725 PRR4Q16378 134 aa11.38□□□□□ -0.59
SF1-213ENST00000472725 FP248Q71RG6 208 aaPredicted RBP11.38□□□□□ -0.59
SF1-213ENST00000472725 A0A1W2PPM0 123 aa11.37□□□□□ -0.59
SF1-213ENST00000472725 HRCT1Q6UXD1 115 aa11.37□□□□□ -0.59
SF1-213ENST00000472725 PCP4L1A6NKN8 68 aa11.36□□□□□ -0.59
SF1-213ENST00000472725 BAALC-AS2P0C853 105 aa11.35□□□□□ -0.59
SF1-213ENST00000472725 RETNLBQ9BQ08 111 aa11.34□□□□□ -0.59
SF1-213ENST00000472725 A0A0G2JQZ4 141 aa11.33□□□□□ -0.6
SF1-213ENST00000472725 Q6Q795 121 aa11.33□□□□□ -0.6
SF1-213ENST00000472725 TRBV7-7A0A0K0K1E9 115 aa11.31□□□□□ -0.6
SF1-213ENST00000472725 TEN1Q86WV5 123 aa11.31□□□□□ -0.6
SF1-213ENST00000472725 ANKRD29Q8N6D5 301 aa11.31□□□□□ -0.6
SF1-213ENST00000472725 IGLV7-46A0A075B6I9 117 aa11.29□□□□□ -0.6
SF1-213ENST00000472725 ASB16-AS1Q495Z4 193 aa11.27□□□□□ -0.61
SF1-213ENST00000472725 HMCN2Q8NDA2 5059 aa11.27□□□□□ -0.61
SF1-213ENST00000472725 C9JAW5 83 aa11.26□□□□□ -0.61
SF1-213ENST00000472725 RBM3P98179 157 aaKnown RBP11.26□□□□□ -0.61
SF1-213ENST00000472725 JMJD7-PLA2G4BH0Y9G9 81 aa11.25□□□□□ -0.61
SF1-213ENST00000472725 TPRXLQ17RH7 258 aa11.25□□□□□ -0.61
SF1-213ENST00000472725 SS18L2Q9UHA2 77 aa11.24□□□□□ -0.61
SF1-213ENST00000472725 SPCS1Q9Y6A9 102 aa11.24□□□□□ -0.61
SF1-213ENST00000472725 TRBV7-4A0A0J9YYF1 115 aa11.23□□□□□ -0.61
SF1-213ENST00000472725 H3BT86 120 aa11.23□□□□□ -0.61
SF1-213ENST00000472725 DSCR8Q96T75 97 aa11.23□□□□□ -0.61
SF1-213ENST00000472725 A0A1W2PNM2 257 aa11.2□□□□□ -0.62
SF1-213ENST00000472725 C1orf195Q5TG92 126 aa11.2□□□□□ -0.62
SF1-213ENST00000472725 A0A1B0GV72 72 aa11.18□□□□□ -0.62
SF1-213ENST00000472725 CCKP06307 115 aa11.17□□□□□ -0.62
SF1-213ENST00000472725 PDE6GP18545 87 aa11.17□□□□□ -0.62
SF1-213ENST00000472725 C21orf62-AS1Q17RA5 79 aa11.17□□□□□ -0.62
SF1-213ENST00000472725 OBSCN-AS1Q96MR7 158 aa11.16□□□□□ -0.62
SF1-213ENST00000472725 A0A087WSZ3 146 aa11.15□□□□□ -0.62
SF1-213ENST00000472725 K7EP34 96 aa11.15□□□□□ -0.62
SF1-213ENST00000472725 LOC110117498A0A087WWA1 95 aa11.14□□□□□ -0.63
SF1-213ENST00000472725 KRTAP13-3Q3SY46 172 aa11.14□□□□□ -0.63
SF1-213ENST00000472725 A0A1B0GW54 56 aa11.13□□□□□ -0.63
SF1-213ENST00000472725 GTF2H5Q6ZYL4 71 aa11.13□□□□□ -0.63
SF1-213ENST00000472725 CDIP1Q9H305 208 aa11.12□□□□□ -0.63
SF1-213ENST00000472725 Q6ZQT0 140 aa11.1□□□□□ -0.63
SF1-213ENST00000472725 MTURNQ8N3F0 131 aa11.08□□□□□ -0.64
SF1-213ENST00000472725 VPS25Q9BRG1 176 aa11.07□□□□□ -0.64
SF1-213ENST00000472725 C14orf132Q9NPU4 83 aa11.06□□□□□ -0.64
SF1-213ENST00000472725 PRO0461Q9UI25 63 aa11.05□□□□□ -0.64
SF1-213ENST00000472725 LRP2P98164 4655 aa11.04□□□□□ -0.64
SF1-213ENST00000472725 SMCPP49901 116 aaPredicted RBP11.03□□□□□ -0.64
SF1-213ENST00000472725 Q96NJ1 140 aa11.02□□□□□ -0.65
SF1-213ENST00000472725 LPAP08519 4548 aa11.02□□□□□ -0.65
SF1-213ENST00000472725 F8W1H4 67 aa11□□□□□ -0.65
SF1-213ENST00000472725 LINC00472Q9H8W2 130 aa10.98□□□□□ -0.65
SF1-213ENST00000472725 XP32Q5T750 250 aa10.97□□□□□ -0.65
SF1-213ENST00000472725 C9orf92A6NGG3 77 aa10.94□□□□□ -0.66
SF1-213ENST00000472725 J3KT08 172 aa10.93□□□□□ -0.66
SF1-213ENST00000472725 IGKV4-1P06312 121 aa10.93□□□□□ -0.66
SF1-213ENST00000472725 SIGMAR1Q99720 223 aa10.91□□□□□ -0.66
SF1-213ENST00000472725 SEC61BP60468 96 aaKnown RBP10.89□□□□□ -0.67
SF1-213ENST00000472725 NREPQ16612 68 aa10.87□□□□□ -0.67
SF1-213ENST00000472725 UBR4Q5T4S7 5183 aa10.87□□□□□ -0.67
SF1-213ENST00000472725 DEFB116Q30KQ4 102 aa10.84□□□□□ -0.67
SF1-213ENST00000472725 ETDBQ3ZM63 59 aa10.83□□□□□ -0.68
SF1-213ENST00000472725 NDUFB1O75438 58 aa10.8□□□□□ -0.68
SF1-213ENST00000472725 LINC00313P59037 77 aa10.8□□□□□ -0.68
SF1-213ENST00000472725 RPL37P61927 97 aaKnown RBP10.8□□□□□ -0.68
SF1-213ENST00000472725 A0A1B0GVX0 72 aa10.79□□□□□ -0.68
SF1-213ENST00000472725 C8orf87E5RJ46 101 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms