RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 SPINK7P58062 85 aa2.75□□□□□ -1.97
VPS50-210ENST00000471188 RPL37AP61513 92 aaKnown RBP2.75□□□□□ -1.97
VPS50-210ENST00000471188 KRTAP21-3Q3LHN1 58 aa2.75□□□□□ -1.97
VPS50-210ENST00000471188 Q9BRP9 147 aa2.75□□□□□ -1.97
VPS50-210ENST00000471188 KRTAP3-1Q9BYR8 98 aa2.75□□□□□ -1.97
VPS50-210ENST00000471188 KCNQ1DNQ9H478 68 aa2.75□□□□□ -1.97
VPS50-210ENST00000471188 PIEZO1Q92508 2521 aa2.75□□□□□ -1.97
VPS50-210ENST00000471188 CFAP46Q8IYW2 2715 aa2.75□□□□□ -1.97
VPS50-210ENST00000471188 IGLV5-48A0A075B6I7 105 aa2.74□□□□□ -1.97
VPS50-210ENST00000471188 RPL37AP8A6NKH3 93 aa2.74□□□□□ -1.97
VPS50-210ENST00000471188 SPANXA2-OT1Q8N9U9 137 aa2.74□□□□□ -1.97
VPS50-210ENST00000471188 C7orf33Q8WU49 177 aa2.74□□□□□ -1.97
VPS50-210ENST00000471188 TENM4Q6N022 2769 aa2.74□□□□□ -1.97
VPS50-210ENST00000471188 FAM208BQ5VWN6 2430 aa2.74□□□□□ -1.97
VPS50-210ENST00000471188 LINC01554Q52M75 96 aa2.74□□□□□ -1.97
VPS50-210ENST00000471188 ADM2Q7Z4H4 148 aa2.74□□□□□ -1.97
VPS50-210ENST00000471188 SPTBN4Q9H254 2564 aa2.74□□□□□ -1.97
VPS50-210ENST00000471188 Q8N1X5 172 aa2.74□□□□□ -1.97
VPS50-210ENST00000471188 CSNK1G2-AS1Q8NCQ2 148 aa2.74□□□□□ -1.97
VPS50-210ENST00000471188 A0A087WSZ3 146 aa2.73□□□□□ -1.97
VPS50-210ENST00000471188 A0A1B0GW54 56 aa2.73□□□□□ -1.97
VPS50-210ENST00000471188 IGKV2D-24A0A075B6R9 120 aa2.73□□□□□ -1.97
VPS50-210ENST00000471188 GVQW2A0A096LPI5 108 aaPredicted RBP2.73□□□□□ -1.97
VPS50-210ENST00000471188 UNC79Q9P2D8 2635 aa2.72□□□□□ -1.97
VPS50-210ENST00000471188 IGLV1-51P01701 117 aa2.72□□□□□ -1.97
VPS50-210ENST00000471188 CMC4P56277 68 aaPredicted RBP2.72□□□□□ -1.97
VPS50-210ENST00000471188 DHRS4-AS1Q9P1J3 65 aa2.72□□□□□ -1.97
VPS50-210ENST00000471188 ABCA12Q86UK0 2595 aa2.72□□□□□ -1.97
VPS50-210ENST00000471188 EGFEM1PQ0D2K5 195 aa2.72□□□□□ -1.97
VPS50-210ENST00000471188 Q6YL49 198 aa2.72□□□□□ -1.97
VPS50-210ENST00000471188 H0Y9J4 135 aa2.71□□□□□ -1.98
VPS50-210ENST00000471188 PRR26Q8N8Z3 221 aa2.71□□□□□ -1.98
VPS50-210ENST00000471188 SPRR4Q96PI1 79 aa2.71□□□□□ -1.98
VPS50-210ENST00000471188 H3BPC8 53 aa2.71□□□□□ -1.98
VPS50-210ENST00000471188 Q8NAQ8 132 aa2.71□□□□□ -1.98
VPS50-210ENST00000471188 LINC00476Q8WZB0 136 aa2.71□□□□□ -1.98
VPS50-210ENST00000471188 LINC01558Q9Y6Z2 57 aa2.71□□□□□ -1.98
VPS50-210ENST00000471188 Q6ZRX8 168 aa2.71□□□□□ -1.98
VPS50-210ENST00000471188 CMYA5Q8N3K9 4069 aa2.7□□□□□ -1.98
VPS50-210ENST00000471188 IGLV7-46A0A075B6I9 117 aa2.7□□□□□ -1.98
VPS50-210ENST00000471188 DEFB135Q30KP9 77 aa2.7□□□□□ -1.98
VPS50-210ENST00000471188 LELP1Q5T871 98 aa2.7□□□□□ -1.98
VPS50-210ENST00000471188 C9orf163Q8N9P6 203 aa2.69□□□□□ -1.98
VPS50-210ENST00000471188 RETNLBQ9BQ08 111 aa2.69□□□□□ -1.98
VPS50-210ENST00000471188 DOPEY1Q5JWR5 2465 aa2.69□□□□□ -1.98
VPS50-210ENST00000471188 MYO18BQ8IUG5 2567 aa2.69□□□□□ -1.98
VPS50-210ENST00000471188 IGFL1Q6UW32 110 aa2.69□□□□□ -1.98
VPS50-210ENST00000471188 PRR34Q9NV39 138 aa2.69□□□□□ -1.98
VPS50-210ENST00000471188 A0A096LNI7 61 aa2.68□□□□□ -1.98
VPS50-210ENST00000471188 BAHCC1Q9P281 2608 aa2.68□□□□□ -1.98
VPS50-210ENST00000471188 IGLV1-50A0A075B6I6 118 aa2.68□□□□□ -1.98
VPS50-210ENST00000471188 FAM168BA1KXE4 195 aa2.68□□□□□ -1.98
VPS50-210ENST00000471188 OTOGQ6ZRI0 2925 aa2.68□□□□□ -1.98
VPS50-210ENST00000471188 KRTAP29-1A8MX34 341 aaPredicted RBP2.67□□□□□ -1.98
VPS50-210ENST00000471188 CNBPP62633 177 aaKnown RBP2.67□□□□□ -1.98
VPS50-210ENST00000471188 DNAH3Q8TD57 4116 aa2.67□□□□□ -1.98
VPS50-210ENST00000471188 HRES1P13985 223 aa2.66□□□□□ -1.98
VPS50-210ENST00000471188 C15orf56Q8N910 161 aa2.66□□□□□ -1.98
VPS50-210ENST00000471188 ZNF706Q9Y5V0 76 aaPredicted RBP2.66□□□□□ -1.98
VPS50-210ENST00000471188 CSAG1Q6PB30 78 aa2.66□□□□□ -1.98
VPS50-210ENST00000471188 ACANP16112 2415 aa2.66□□□□□ -1.98
VPS50-210ENST00000471188 IGSF10Q6WRI0 2623 aa2.66□□□□□ -1.98
VPS50-210ENST00000471188 FLNCQ14315 2725 aa2.66□□□□□ -1.98
VPS50-210ENST00000471188 A8MWP4 228 aa2.66□□□□□ -1.98
VPS50-210ENST00000471188 PRLHP81277 87 aa2.66□□□□□ -1.98
VPS50-210ENST00000471188 ANK3Q12955 4377 aaKnown RBP2.65□□□□□ -1.98
VPS50-210ENST00000471188 PDZD2O15018 2839 aa2.65□□□□□ -1.99
VPS50-210ENST00000471188 IGLV5-37A0A075B6J1 123 aa2.65□□□□□ -1.99
VPS50-210ENST00000471188 SPART-AS1P0CW21 52 aa2.65□□□□□ -1.99
VPS50-210ENST00000471188 PLAC8Q9NZF1 115 aa2.65□□□□□ -1.99
VPS50-210ENST00000471188 REG3GQ6UW15 175 aa2.64□□□□□ -1.99
VPS50-210ENST00000471188 A0A1B0GU69 56 aa2.64□□□□□ -1.99
VPS50-210ENST00000471188 KRTAP4-16G5E9R7 235 aaPredicted RBP2.64□□□□□ -1.99
VPS50-210ENST00000471188 IGKV2-24A0A0C4DH68 120 aa2.63□□□□□ -1.99
VPS50-210ENST00000471188 KRTAP1-1Q07627 177 aa2.63□□□□□ -1.99
VPS50-210ENST00000471188 MMP24-AS1A0A0U1RRL7 71 aa2.62□□□□□ -1.99
VPS50-210ENST00000471188 SPRR1AP35321 89 aa2.62□□□□□ -1.99
VPS50-210ENST00000471188 C1orf134Q5TEV5 83 aa2.62□□□□□ -1.99
VPS50-210ENST00000471188 TP53AIP1Q9HCN2 124 aa2.62□□□□□ -1.99
VPS50-210ENST00000471188 HELZ2Q9BYK8 2649 aaKnown RBP2.62□□□□□ -1.99
VPS50-210ENST00000471188 SRRM2Q9UQ35 2752 aaKnown RBP2.62□□□□□ -1.99
VPS50-210ENST00000471188 IGHV6-1A0A0B4J1U7 121 aa2.62□□□□□ -1.99
VPS50-210ENST00000471188 MIR22HGQ0VDD5 57 aa2.62□□□□□ -1.99
VPS50-210ENST00000471188 Q6ZR54 194 aa2.62□□□□□ -1.99
VPS50-210ENST00000471188 RTL8CO15255 209 aa2.61□□□□□ -1.99
VPS50-210ENST00000471188 CDK2AP2O75956 126 aa2.61□□□□□ -1.99
VPS50-210ENST00000471188 KRTAP26-1Q6PEX3 210 aa2.61□□□□□ -1.99
VPS50-210ENST00000471188 LINC00472Q9H8W2 130 aa2.61□□□□□ -1.99
VPS50-210ENST00000471188 FLNAP21333 2647 aaKnown RBP2.61□□□□□ -1.99
VPS50-210ENST00000471188 DNHD1Q96M86 4753 aa2.61□□□□□ -1.99
VPS50-210ENST00000471188 PKD1L1Q8TDX9 2849 aa2.61□□□□□ -1.99
VPS50-210ENST00000471188 IGLV8-61A0A075B6I0 122 aa2.6□□□□□ -1.99
VPS50-210ENST00000471188 UQCR11O14957 56 aa2.6□□□□□ -1.99
VPS50-210ENST00000471188 ACYP2P14621 99 aa2.6□□□□□ -1.99
VPS50-210ENST00000471188 DEFB131BA0A096LNP1 70 aa2.6□□□□□ -1.99
VPS50-210ENST00000471188 J3QKU1 62 aa2.6□□□□□ -1.99
VPS50-210ENST00000471188 ITPR3Q14573 2671 aa2.6□□□□□ -1.99
VPS50-210ENST00000471188 NOTCH2Q04721 2471 aa2.6□□□□□ -1.99
VPS50-210ENST00000471188 ASB16-AS1Q495Z4 193 aa2.59□□□□□ -1.99
VPS50-210ENST00000471188 C8orf17Q9NRJ1 99 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms