RNA–Protein interactions for RNA: ENST00000470826.5

FGFR1-217, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 2,281 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-217ENST00000470826 ZCCHC13Q8WW36 166 aaKnown RBP13.07□□□□□ -0.32
FGFR1-217ENST00000470826 KRTAP11-1Q8IUC1 163 aa13.06□□□□□ -0.32
FGFR1-217ENST00000470826 DEFB116Q30KQ4 102 aa13.05□□□□□ -0.32
FGFR1-217ENST00000470826 A0A087WSZ3 146 aa13.05□□□□□ -0.32
FGFR1-217ENST00000470826 COL6A5A8TX70 2615 aa13.04□□□□□ -0.32
FGFR1-217ENST00000470826 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.04□□□□□ -0.32
FGFR1-217ENST00000470826 COL7A1Q02388 2944 aa13.03□□□□□ -0.32
FGFR1-217ENST00000470826 CHTF8P0CG12 524 aa13.02□□□□□ -0.32
FGFR1-217ENST00000470826 PHF5AQ7RTV0 110 aaKnown RBP13.02□□□□□ -0.32
FGFR1-217ENST00000470826 UBE2AP49459 152 aa13.01□□□□□ -0.33
FGFR1-217ENST00000470826 LINC00336Q6ZUF6 198 aa13.01□□□□□ -0.33
FGFR1-217ENST00000470826 APLNQ9ULZ1 77 aa12.99□□□□□ -0.33
FGFR1-217ENST00000470826 H0Y9J4 135 aa12.99□□□□□ -0.33
FGFR1-217ENST00000470826 UBE2DNLQ8IWF7 75 aa12.99□□□□□ -0.33
FGFR1-217ENST00000470826 SPRR1BP22528 89 aa12.98□□□□□ -0.33
FGFR1-217ENST00000470826 C14orf177Q52M58 125 aa12.98□□□□□ -0.33
FGFR1-217ENST00000470826 DNAH7Q8WXX0 4024 aa12.98□□□□□ -0.33
FGFR1-217ENST00000470826 DYNC2H1Q8NCM8 4307 aaKnown RBP12.97□□□□□ -0.33
FGFR1-217ENST00000470826 STAB2Q8WWQ8 2551 aa12.97□□□□□ -0.33
FGFR1-217ENST00000470826 SRRM2Q9UQ35 2752 aaKnown RBP12.96□□□□□ -0.33
FGFR1-217ENST00000470826 RPL37AP61513 92 aaKnown RBP12.95□□□□□ -0.34
FGFR1-217ENST00000470826 WFDC13Q8IUB5 93 aa12.95□□□□□ -0.34
FGFR1-217ENST00000470826 CSMD3Q7Z407 3707 aa12.93□□□□□ -0.34
FGFR1-217ENST00000470826 hDV103S1A0JD37 113 aa12.92□□□□□ -0.34
FGFR1-217ENST00000470826 C9orf163Q8N9P6 203 aa12.92□□□□□ -0.34
FGFR1-217ENST00000470826 KRTAP29-1A8MX34 341 aaPredicted RBP12.92□□□□□ -0.34
FGFR1-217ENST00000470826 MPLKIPQ8TAP9 179 aa12.92□□□□□ -0.34
FGFR1-217ENST00000470826 LRCOL1A6NCL2 159 aa12.91□□□□□ -0.34
FGFR1-217ENST00000470826 PRO0628Q9UI54 55 aa12.9□□□□□ -0.35
FGFR1-217ENST00000470826 MGAM2Q2M2H8 2515 aa12.89□□□□□ -0.35
FGFR1-217ENST00000470826 C1orf64Q8NEQ6 169 aa12.88□□□□□ -0.35
FGFR1-217ENST00000470826 LINC00472Q9H8W2 130 aa12.88□□□□□ -0.35
FGFR1-217ENST00000470826 PRR15Q8IV56 129 aa12.87□□□□□ -0.35
FGFR1-217ENST00000470826 PANO1I0J062 215 aa12.86□□□□□ -0.35
FGFR1-217ENST00000470826 PLECQ15149 4684 aaKnown RBP12.85□□□□□ -0.35
FGFR1-217ENST00000470826 B9D2Q9BPU9 175 aa12.85□□□□□ -0.35
FGFR1-217ENST00000470826 A8MWP4 228 aa12.84□□□□□ -0.35
FGFR1-217ENST00000470826 KRTAP13-1Q8IUC0 172 aa12.84□□□□□ -0.35
FGFR1-217ENST00000470826 CYP4F30PQ9H0H9 118 aa12.84□□□□□ -0.35
FGFR1-217ENST00000470826 TENM2Q9NT68 2774 aa12.84□□□□□ -0.35
FGFR1-217ENST00000470826 MP68P56378 58 aa12.83□□□□□ -0.36
FGFR1-217ENST00000470826 CASC2Q6XLA1 102 aa12.83□□□□□ -0.36
FGFR1-217ENST00000470826 NDUFB1O75438 58 aa12.82□□□□□ -0.36
FGFR1-217ENST00000470826 NBDYA0A0U1RRE5 68 aa12.81□□□□□ -0.36
FGFR1-217ENST00000470826 Q6ZRN7 208 aaPredicted RBP12.81□□□□□ -0.36
FGFR1-217ENST00000470826 PKIGQ9Y2B9 76 aa12.81□□□□□ -0.36
FGFR1-217ENST00000470826 TRAV22A0A0B4J277 110 aa12.81□□□□□ -0.36
FGFR1-217ENST00000470826 PRR4Q16378 134 aa12.79□□□□□ -0.36
FGFR1-217ENST00000470826 LINC00208Q96KT6 92 aa12.79□□□□□ -0.36
FGFR1-217ENST00000470826 H0Y9P7 68 aa12.75□□□□□ -0.37
FGFR1-217ENST00000470826 Q1T7F1 81 aa12.74□□□□□ -0.37
FGFR1-217ENST00000470826 BRK1Q8WUW1 75 aa12.74□□□□□ -0.37
FGFR1-217ENST00000470826 MDFIQ99750 246 aa12.74□□□□□ -0.37
FGFR1-217ENST00000470826 H3BPC8 53 aa12.72□□□□□ -0.37
FGFR1-217ENST00000470826 SPACA4Q8TDM5 124 aa12.72□□□□□ -0.37
FGFR1-217ENST00000470826 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.72□□□□□ -0.37
FGFR1-217ENST00000470826 MMP24-AS1A0A0U1RRL7 71 aa12.71□□□□□ -0.37
FGFR1-217ENST00000470826 Q96NJ1 140 aa12.68□□□□□ -0.38
FGFR1-217ENST00000470826 NUPR2A6NF83 97 aa12.68□□□□□ -0.38
FGFR1-217ENST00000470826 SPANXA2-OT1Q8N9U9 137 aa12.67□□□□□ -0.38
FGFR1-217ENST00000470826 IGLV9-49A0A0B4J1Y8 123 aa12.67□□□□□ -0.38
FGFR1-217ENST00000470826 LINC00483Q53H64 154 aa12.65□□□□□ -0.38
FGFR1-217ENST00000470826 VPS13DQ5THJ4 4388 aa12.64□□□□□ -0.39
FGFR1-217ENST00000470826 STARD9Q9P2P6 4700 aa12.63□□□□□ -0.39
FGFR1-217ENST00000470826 HECTD4Q9Y4D8 3996 aa12.62□□□□□ -0.39
FGFR1-217ENST00000470826 ASB16-AS1Q495Z4 193 aa12.62□□□□□ -0.39
FGFR1-217ENST00000470826 A0A087WTM6 91 aa12.59□□□□□ -0.39
FGFR1-217ENST00000470826 MOBPQ13875 183 aa12.59□□□□□ -0.39
FGFR1-217ENST00000470826 WWC2-AS2Q96NR7 200 aa12.57□□□□□ -0.4
FGFR1-217ENST00000470826 FRAS1Q86XX4 4008 aa12.56□□□□□ -0.4
FGFR1-217ENST00000470826 PSPHP1O15172 72 aa12.56□□□□□ -0.4
FGFR1-217ENST00000470826 DNAH8Q96JB1 4490 aa12.56□□□□□ -0.4
FGFR1-217ENST00000470826 PRKDCP78527 4128 aaKnown RBP12.56□□□□□ -0.4
FGFR1-217ENST00000470826 PSORS1C2Q9UIG4 136 aa12.55□□□□□ -0.4
FGFR1-217ENST00000470826 IGLV5-52A0A0A0MRZ9 124 aa12.54□□□□□ -0.4
FGFR1-217ENST00000470826 ZNF706Q9Y5V0 76 aaPredicted RBP12.54□□□□□ -0.4
FGFR1-217ENST00000470826 C8orf17Q9NRJ1 99 aa12.53□□□□□ -0.4
FGFR1-217ENST00000470826 DNAH2Q9P225 4427 aa12.52□□□□□ -0.4
FGFR1-217ENST00000470826 RTL8CO15255 209 aa12.52□□□□□ -0.41
FGFR1-217ENST00000470826 TP53AIP1Q9HCN2 124 aa12.51□□□□□ -0.41
FGFR1-217ENST00000470826 V9GYY9 64 aa12.5□□□□□ -0.41
FGFR1-217ENST00000470826 ANAPC11Q9NYG5 84 aa12.49□□□□□ -0.41
FGFR1-217ENST00000470826 IGLV7-46A0A075B6I9 117 aa12.49□□□□□ -0.41
FGFR1-217ENST00000470826 A0A1B0GVX0 72 aa12.49□□□□□ -0.41
FGFR1-217ENST00000470826 PLAC8Q9NZF1 115 aa12.49□□□□□ -0.41
FGFR1-217ENST00000470826 KMT2AQ03164 3969 aa12.48□□□□□ -0.41
FGFR1-217ENST00000470826 DNAH17Q9UFH2 4485 aa12.48□□□□□ -0.41
FGFR1-217ENST00000470826 ZNF861PO60384 105 aa12.48□□□□□ -0.41
FGFR1-217ENST00000470826 Q6ZR54 194 aa12.48□□□□□ -0.41
FGFR1-217ENST00000470826 IGHV6-1A0A0B4J1U7 121 aa12.47□□□□□ -0.41
FGFR1-217ENST00000470826 A8MUN3 132 aa12.47□□□□□ -0.41
FGFR1-217ENST00000470826 Q8N9P0 234 aaPredicted RBP12.45□□□□□ -0.42
FGFR1-217ENST00000470826 CD164Q04900 197 aa12.42□□□□□ -0.42
FGFR1-217ENST00000470826 PCOTHQ58A44 107 aa12.42□□□□□ -0.42
FGFR1-217ENST00000470826 FBN3Q75N90 2809 aa12.42□□□□□ -0.42
FGFR1-217ENST00000470826 Q5VV11 94 aa12.41□□□□□ -0.42
FGFR1-217ENST00000470826 COA5Q86WW8 74 aa12.4□□□□□ -0.42
FGFR1-217ENST00000470826 A0A087X002 238 aa12.4□□□□□ -0.42
FGFR1-217ENST00000470826 CDK2AP2O75956 126 aa12.4□□□□□ -0.42
FGFR1-217ENST00000470826 NOTCH2NLQ7Z3S9 236 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms