RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 DNAH10Q8IVF4 4471 aa8.5□□□□□ -1.05
BRCA1-209ENST00000470026 DNAH9Q9NYC9 4486 aa8.49□□□□□ -1.05
BRCA1-209ENST00000470026 A0A087WSZ3 146 aa8.48□□□□□ -1.05
BRCA1-209ENST00000470026 PHF5AQ7RTV0 110 aaKnown RBP8.48□□□□□ -1.05
BRCA1-209ENST00000470026 NBEAL1Q6ZS30 2694 aa8.48□□□□□ -1.05
BRCA1-209ENST00000470026 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-209ENST00000470026 UBE2AP49459 152 aa8.48□□□□□ -1.05
BRCA1-209ENST00000470026 C9orf163Q8N9P6 203 aa8.48□□□□□ -1.05
BRCA1-209ENST00000470026 LINC00474Q9P2X8 69 aa8.48□□□□□ -1.05
BRCA1-209ENST00000470026 LRCOL1A6NCL2 159 aa8.47□□□□□ -1.05
BRCA1-209ENST00000470026 CHTF8P0CG12 524 aa8.47□□□□□ -1.05
BRCA1-209ENST00000470026 UBE2DNLQ8IWF7 75 aa8.47□□□□□ -1.05
BRCA1-209ENST00000470026 FAM229BQ4G0N7 80 aa8.46□□□□□ -1.06
BRCA1-209ENST00000470026 KRTAP29-1A8MX34 341 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-209ENST00000470026 PKIGQ9Y2B9 76 aa8.45□□□□□ -1.06
BRCA1-209ENST00000470026 DYNC2H1Q8NCM8 4307 aaKnown RBP8.45□□□□□ -1.06
BRCA1-209ENST00000470026 DEFB116Q30KQ4 102 aa8.43□□□□□ -1.06
BRCA1-209ENST00000470026 KRTAP13-1Q8IUC0 172 aa8.43□□□□□ -1.06
BRCA1-209ENST00000470026 LINC00472Q9H8W2 130 aa8.42□□□□□ -1.06
BRCA1-209ENST00000470026 COL6A5A8TX70 2615 aa8.42□□□□□ -1.06
BRCA1-209ENST00000470026 hDV103S1A0JD37 113 aa8.41□□□□□ -1.06
BRCA1-209ENST00000470026 Q6ZRN7 208 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-209ENST00000470026 LINC00336Q6ZUF6 198 aa8.41□□□□□ -1.06
BRCA1-209ENST00000470026 PRR15Q8IV56 129 aa8.4□□□□□ -1.06
BRCA1-209ENST00000470026 CYP4F30PQ9H0H9 118 aa8.4□□□□□ -1.06
BRCA1-209ENST00000470026 NBDYA0A0U1RRE5 68 aa8.39□□□□□ -1.07
BRCA1-209ENST00000470026 WFDC13Q8IUB5 93 aa8.39□□□□□ -1.07
BRCA1-209ENST00000470026 A8MWP4 228 aa8.39□□□□□ -1.07
BRCA1-209ENST00000470026 RPL37AP61513 92 aaKnown RBP8.39□□□□□ -1.07
BRCA1-209ENST00000470026 LYSTQ99698 3801 aa8.39□□□□□ -1.07
BRCA1-209ENST00000470026 B9D2Q9BPU9 175 aa8.39□□□□□ -1.07
BRCA1-209ENST00000470026 STAB2Q8WWQ8 2551 aa8.38□□□□□ -1.07
BRCA1-209ENST00000470026 PANO1I0J062 215 aa8.38□□□□□ -1.07
BRCA1-209ENST00000470026 NDUFB1O75438 58 aa8.36□□□□□ -1.07
BRCA1-209ENST00000470026 C1orf64Q8NEQ6 169 aa8.36□□□□□ -1.07
BRCA1-209ENST00000470026 PRO0628Q9UI54 55 aa8.36□□□□□ -1.07
BRCA1-209ENST00000470026 COL7A1Q02388 2944 aa8.36□□□□□ -1.07
BRCA1-209ENST00000470026 CASC2Q6XLA1 102 aa8.35□□□□□ -1.07
BRCA1-209ENST00000470026 H3BPC8 53 aa8.35□□□□□ -1.07
BRCA1-209ENST00000470026 MP68P56378 58 aa8.35□□□□□ -1.07
BRCA1-209ENST00000470026 TRAV22A0A0B4J277 110 aa8.34□□□□□ -1.07
BRCA1-209ENST00000470026 MGAM2Q2M2H8 2515 aa8.34□□□□□ -1.07
BRCA1-209ENST00000470026 SPACA4Q8TDM5 124 aa8.33□□□□□ -1.08
BRCA1-209ENST00000470026 NUPR2A6NF83 97 aa8.33□□□□□ -1.08
BRCA1-209ENST00000470026 MPLKIPQ8TAP9 179 aa8.33□□□□□ -1.08
BRCA1-209ENST00000470026 MDFIQ99750 246 aa8.32□□□□□ -1.08
BRCA1-209ENST00000470026 LINC00483Q53H64 154 aa8.31□□□□□ -1.08
BRCA1-209ENST00000470026 PLECQ15149 4684 aaKnown RBP8.31□□□□□ -1.08
BRCA1-209ENST00000470026 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-209ENST00000470026 MMP24-AS1A0A0U1RRL7 71 aa8.3□□□□□ -1.08
BRCA1-209ENST00000470026 Q1T7F1 81 aa8.3□□□□□ -1.08
BRCA1-209ENST00000470026 LINC00208Q96KT6 92 aa8.3□□□□□ -1.08
BRCA1-209ENST00000470026 SPANXA2-OT1Q8N9U9 137 aa8.29□□□□□ -1.08
BRCA1-209ENST00000470026 DNAH7Q8WXX0 4024 aa8.29□□□□□ -1.08
BRCA1-209ENST00000470026 H0Y9P7 68 aa8.29□□□□□ -1.08
BRCA1-209ENST00000470026 ASB16-AS1Q495Z4 193 aa8.29□□□□□ -1.08
BRCA1-209ENST00000470026 Q96NJ1 140 aa8.29□□□□□ -1.08
BRCA1-209ENST00000470026 CSMD3Q7Z407 3707 aa8.28□□□□□ -1.08
BRCA1-209ENST00000470026 SRRM2Q9UQ35 2752 aaKnown RBP8.26□□□□□ -1.09
BRCA1-209ENST00000470026 A0A087WTM6 91 aa8.25□□□□□ -1.09
BRCA1-209ENST00000470026 PRR4Q16378 134 aa8.24□□□□□ -1.09
BRCA1-209ENST00000470026 VPS13DQ5THJ4 4388 aa8.24□□□□□ -1.09
BRCA1-209ENST00000470026 IGLV9-49A0A0B4J1Y8 123 aa8.22□□□□□ -1.09
BRCA1-209ENST00000470026 WWC2-AS2Q96NR7 200 aa8.22□□□□□ -1.09
BRCA1-209ENST00000470026 ZNF706Q9Y5V0 76 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-209ENST00000470026 MOBPQ13875 183 aa8.21□□□□□ -1.09
BRCA1-209ENST00000470026 IGLV5-52A0A0A0MRZ9 124 aa8.21□□□□□ -1.1
BRCA1-209ENST00000470026 BRK1Q8WUW1 75 aa8.21□□□□□ -1.1
BRCA1-209ENST00000470026 PLAC8Q9NZF1 115 aa8.2□□□□□ -1.1
BRCA1-209ENST00000470026 PSORS1C2Q9UIG4 136 aa8.2□□□□□ -1.1
BRCA1-209ENST00000470026 TP53AIP1Q9HCN2 124 aa8.19□□□□□ -1.1
BRCA1-209ENST00000470026 RTL8CO15255 209 aa8.18□□□□□ -1.1
BRCA1-209ENST00000470026 Q6ZR54 194 aa8.18□□□□□ -1.1
BRCA1-209ENST00000470026 C8orf17Q9NRJ1 99 aa8.18□□□□□ -1.1
BRCA1-209ENST00000470026 TENM2Q9NT68 2774 aa8.18□□□□□ -1.1
BRCA1-209ENST00000470026 ZNF861PO60384 105 aa8.17□□□□□ -1.1
BRCA1-209ENST00000470026 STARD9Q9P2P6 4700 aa8.16□□□□□ -1.1
BRCA1-209ENST00000470026 V9GYY9 64 aa8.16□□□□□ -1.1
BRCA1-209ENST00000470026 A0A1B0GVX0 72 aa8.15□□□□□ -1.1
BRCA1-209ENST00000470026 IGLV7-46A0A075B6I9 117 aa8.15□□□□□ -1.11
BRCA1-209ENST00000470026 DNAH17Q9UFH2 4485 aa8.15□□□□□ -1.11
BRCA1-209ENST00000470026 DNAH8Q96JB1 4490 aa8.13□□□□□ -1.11
BRCA1-209ENST00000470026 PRKDCP78527 4128 aaKnown RBP8.12□□□□□ -1.11
BRCA1-209ENST00000470026 C1orf195Q5TG92 126 aa8.1□□□□□ -1.11
BRCA1-209ENST00000470026 HECTD4Q9Y4D8 3996 aa8.1□□□□□ -1.11
BRCA1-209ENST00000470026 PSPHP1O15172 72 aa8.09□□□□□ -1.11
BRCA1-209ENST00000470026 Q8N9P0 234 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-209ENST00000470026 MRPL34Q9BQ48 92 aaKnown RBP8.09□□□□□ -1.11
BRCA1-209ENST00000470026 ANAPC11Q9NYG5 84 aa8.09□□□□□ -1.11
BRCA1-209ENST00000470026 IGHV6-1A0A0B4J1U7 121 aa8.09□□□□□ -1.11
BRCA1-209ENST00000470026 CD164Q04900 197 aa8.08□□□□□ -1.12
BRCA1-209ENST00000470026 A8MUN3 132 aa8.07□□□□□ -1.12
BRCA1-209ENST00000470026 CDK2AP2O75956 126 aa8.07□□□□□ -1.12
BRCA1-209ENST00000470026 A0A087X002 238 aa8.06□□□□□ -1.12
BRCA1-209ENST00000470026 Q5VV11 94 aa8.06□□□□□ -1.12
BRCA1-209ENST00000470026 NOTCH2NLQ7Z3S9 236 aa8.06□□□□□ -1.12
BRCA1-209ENST00000470026 COA5Q86WW8 74 aa8.06□□□□□ -1.12
BRCA1-209ENST00000470026 LIMD2Q9BT23 127 aa8.06□□□□□ -1.12
BRCA1-209ENST00000470026 DNAH2Q9P225 4427 aa8.06□□□□□ -1.12
BRCA1-209ENST00000470026 IGLV7-43P04211 117 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms