RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 LINC01547P58512 204 aaPredicted RBP13.51□□□□□ -0.25
SREBF1-208ENST00000469356 C9orf153Q5TBE3 101 aa13.51□□□□□ -0.25
SREBF1-208ENST00000469356 Q8N377 158 aa13.51□□□□□ -0.25
SREBF1-208ENST00000469356 SNHG12Q9BXW3 62 aa13.5□□□□□ -0.25
SREBF1-208ENST00000469356 F8WEM9 126 aa13.49□□□□□ -0.25
SREBF1-208ENST00000469356 TNXBP22105 4242 aa13.48□□□□□ -0.25
SREBF1-208ENST00000469356 MOBPQ13875 183 aa13.48□□□□□ -0.25
SREBF1-208ENST00000469356 COL5A1-AS1Q5SY13 56 aa13.48□□□□□ -0.25
SREBF1-208ENST00000469356 Q8NBF4 154 aa13.48□□□□□ -0.25
SREBF1-208ENST00000469356 C9orf118A6NHY6 69 aa13.47□□□□□ -0.25
SREBF1-208ENST00000469356 TRACP01848 142 aa13.47□□□□□ -0.25
SREBF1-208ENST00000469356 C4orf48Q5BLP8 95 aa13.47□□□□□ -0.25
SREBF1-208ENST00000469356 LST1O00453 97 aa13.46□□□□□ -0.25
SREBF1-208ENST00000469356 LINC00304Q8N9R0 145 aa13.46□□□□□ -0.25
SREBF1-208ENST00000469356 NAA38Q9BRA0 125 aaKnown RBP13.46□□□□□ -0.25
SREBF1-208ENST00000469356 H3BUT2 72 aa13.45□□□□□ -0.26
SREBF1-208ENST00000469356 SPAG11AQ6PDA7 123 aa13.45□□□□□ -0.26
SREBF1-208ENST00000469356 ORMDL1Q9P0S3 153 aa13.45□□□□□ -0.26
SREBF1-208ENST00000469356 TAX1BP3O14907 124 aa13.44□□□□□ -0.26
SREBF1-208ENST00000469356 ATXN8Q156A1 80 aa13.44□□□□□ -0.26
SREBF1-208ENST00000469356 TRBV20-1A0A075B6N2 111 aa13.43□□□□□ -0.26
SREBF1-208ENST00000469356 SMIM29Q86T20 159 aa13.43□□□□□ -0.26
SREBF1-208ENST00000469356 TMEM256-PLSCR3K7ERE1 68 aa13.4□□□□□ -0.26
SREBF1-208ENST00000469356 FABP2P12104 132 aa13.4□□□□□ -0.26
SREBF1-208ENST00000469356 TCL1BO95988 128 aa13.39□□□□□ -0.27
SREBF1-208ENST00000469356 A0A1W2PPM0 123 aa13.38□□□□□ -0.27
SREBF1-208ENST00000469356 NDUFV3P56181 108 aaKnown RBP13.36□□□□□ -0.27
SREBF1-208ENST00000469356 SPINK1P00995 79 aa13.35□□□□□ -0.27
SREBF1-208ENST00000469356 Q6JHZ5 121 aa13.35□□□□□ -0.27
SREBF1-208ENST00000469356 IGLV8-61A0A075B6I0 122 aa13.32□□□□□ -0.28
SREBF1-208ENST00000469356 UBE2V1Q13404 147 aa13.31□□□□□ -0.28
SREBF1-208ENST00000469356 BAALC-AS2P0C853 105 aa13.3□□□□□ -0.28
SREBF1-208ENST00000469356 CD164Q04900 197 aa13.29□□□□□ -0.28
SREBF1-208ENST00000469356 H3BMG7 143 aa13.28□□□□□ -0.28
SREBF1-208ENST00000469356 RPS29P62273 56 aaKnown RBP13.28□□□□□ -0.28
SREBF1-208ENST00000469356 SPCS1Q9Y6A9 102 aa13.26□□□□□ -0.29
SREBF1-208ENST00000469356 ANKRD29Q8N6D5 301 aa13.23□□□□□ -0.29
SREBF1-208ENST00000469356 LIMD2Q9BT23 127 aa13.23□□□□□ -0.29
SREBF1-208ENST00000469356 C9JAW5 83 aa13.22□□□□□ -0.29
SREBF1-208ENST00000469356 HRCT1Q6UXD1 115 aa13.22□□□□□ -0.29
SREBF1-208ENST00000469356 IGFL1Q6UW32 110 aa13.21□□□□□ -0.29
SREBF1-208ENST00000469356 RBM3P98179 157 aaKnown RBP13.17□□□□□ -0.3
SREBF1-208ENST00000469356 JMJD7-PLA2G4BH0Y9G9 81 aa13.16□□□□□ -0.3
SREBF1-208ENST00000469356 H3BT86 120 aa13.16□□□□□ -0.3
SREBF1-208ENST00000469356 GTF2H5Q6ZYL4 71 aa13.15□□□□□ -0.3
SREBF1-208ENST00000469356 DSCR8Q96T75 97 aa13.14□□□□□ -0.31
SREBF1-208ENST00000469356 A0A0G2JQZ4 141 aa13.13□□□□□ -0.31
SREBF1-208ENST00000469356 K7EP34 96 aa13.13□□□□□ -0.31
SREBF1-208ENST00000469356 TEN1Q86WV5 123 aa13.13□□□□□ -0.31
SREBF1-208ENST00000469356 HERC1Q15751 4861 aa13.13□□□□□ -0.31
SREBF1-208ENST00000469356 Q6Q795 121 aa13.13□□□□□ -0.31
SREBF1-208ENST00000469356 A0A1B0GV72 72 aa13.12□□□□□ -0.31
SREBF1-208ENST00000469356 Q5XG85 94 aa13.12□□□□□ -0.31
SREBF1-208ENST00000469356 PRR4Q16378 134 aa13.11□□□□□ -0.31
SREBF1-208ENST00000469356 TRBV7-7A0A0K0K1E9 115 aa13.1□□□□□ -0.31
SREBF1-208ENST00000469356 FP248Q71RG6 208 aaPredicted RBP13.07□□□□□ -0.32
SREBF1-208ENST00000469356 SS18L2Q9UHA2 77 aa13.07□□□□□ -0.32
SREBF1-208ENST00000469356 TRBV7-4A0A0J9YYF1 115 aa13.06□□□□□ -0.32
SREBF1-208ENST00000469356 PDE6GP18545 87 aa13.06□□□□□ -0.32
SREBF1-208ENST00000469356 C21orf62-AS1Q17RA5 79 aa13.06□□□□□ -0.32
SREBF1-208ENST00000469356 RETNLBQ9BQ08 111 aa13.06□□□□□ -0.32
SREBF1-208ENST00000469356 CCKP06307 115 aa13.04□□□□□ -0.32
SREBF1-208ENST00000469356 MTURNQ8N3F0 131 aa13.04□□□□□ -0.32
SREBF1-208ENST00000469356 A0A1W2PNM2 257 aa13□□□□□ -0.33
SREBF1-208ENST00000469356 ASB16-AS1Q495Z4 193 aa13□□□□□ -0.33
SREBF1-208ENST00000469356 VPS25Q9BRG1 176 aa12.99□□□□□ -0.33
SREBF1-208ENST00000469356 IGLV7-46A0A075B6I9 117 aa12.98□□□□□ -0.33
SREBF1-208ENST00000469356 LOC110117498A0A087WWA1 95 aa12.98□□□□□ -0.33
SREBF1-208ENST00000469356 OBSCN-AS1Q96MR7 158 aa12.98□□□□□ -0.33
SREBF1-208ENST00000469356 A0A087WSZ3 146 aa12.97□□□□□ -0.33
SREBF1-208ENST00000469356 F8W1H4 67 aa12.96□□□□□ -0.33
SREBF1-208ENST00000469356 A0A1B0GW54 56 aa12.95□□□□□ -0.34
SREBF1-208ENST00000469356 C14orf132Q9NPU4 83 aa12.95□□□□□ -0.34
SREBF1-208ENST00000469356 Q6ZQT0 140 aa12.93□□□□□ -0.34
SREBF1-208ENST00000469356 PRO0461Q9UI25 63 aa12.93□□□□□ -0.34
SREBF1-208ENST00000469356 C1orf195Q5TG92 126 aa12.92□□□□□ -0.34
SREBF1-208ENST00000469356 SMCPP49901 116 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-208ENST00000469356 HMCN2Q8NDA2 5059 aa12.87□□□□□ -0.35
SREBF1-208ENST00000469356 TPRXLQ17RH7 258 aa12.87□□□□□ -0.35
SREBF1-208ENST00000469356 A0A1B0GV90 55 aa12.81□□□□□ -0.36
SREBF1-208ENST00000469356 CDIP1Q9H305 208 aa12.8□□□□□ -0.36
SREBF1-208ENST00000469356 KRTAP13-3Q3SY46 172 aa12.76□□□□□ -0.37
SREBF1-208ENST00000469356 ETDBQ3ZM63 59 aa12.76□□□□□ -0.37
SREBF1-208ENST00000469356 IGKV4-1P06312 121 aa12.73□□□□□ -0.37
SREBF1-208ENST00000469356 Q96NJ1 140 aa12.73□□□□□ -0.37
SREBF1-208ENST00000469356 LINC00472Q9H8W2 130 aa12.73□□□□□ -0.37
SREBF1-208ENST00000469356 J3KT08 172 aa12.72□□□□□ -0.37
SREBF1-208ENST00000469356 NREPQ16612 68 aa12.72□□□□□ -0.37
SREBF1-208ENST00000469356 SIGMAR1Q99720 223 aa12.72□□□□□ -0.37
SREBF1-208ENST00000469356 C9orf92A6NGG3 77 aa12.66□□□□□ -0.38
SREBF1-208ENST00000469356 DEFB116Q30KQ4 102 aa12.65□□□□□ -0.38
SREBF1-208ENST00000469356 LPAP08519 4548 aa12.63□□□□□ -0.39
SREBF1-208ENST00000469356 NDUFB1O75438 58 aa12.62□□□□□ -0.39
SREBF1-208ENST00000469356 LRP2P98164 4655 aa12.62□□□□□ -0.39
SREBF1-208ENST00000469356 UBL5Q9BZL1 73 aa12.61□□□□□ -0.39
SREBF1-208ENST00000469356 XP32Q5T750 250 aa12.58□□□□□ -0.4
SREBF1-208ENST00000469356 LINC00313P59037 77 aa12.55□□□□□ -0.4
SREBF1-208ENST00000469356 Q6ZVQ6 151 aa12.55□□□□□ -0.4
SREBF1-208ENST00000469356 A0A1B0GVX0 72 aa12.54□□□□□ -0.4
SREBF1-208ENST00000469356 C8orf87E5RJ46 101 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms