RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 CEND1Q8N111 149 aa5.16□□□□□ -1.58
SSBP1-208ENST00000469123 ANKRD29Q8N6D5 301 aa5.16□□□□□ -1.58
SSBP1-208ENST00000469123 TRAV13-2A0A0B4J235 113 aa5.15□□□□□ -1.59
SSBP1-208ENST00000469123 KRTAP4-16G5E9R7 235 aaPredicted RBP5.15□□□□□ -1.59
SSBP1-208ENST00000469123 ZNF73O43830 326 aaPredicted RBP5.15□□□□□ -1.59
SSBP1-208ENST00000469123 MT1HL1P0DM35 61 aa5.15□□□□□ -1.59
SSBP1-208ENST00000469123 PRLHP81277 87 aa5.15□□□□□ -1.59
SSBP1-208ENST00000469123 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
SSBP1-208ENST00000469123 FAM229BQ4G0N7 80 aa5.15□□□□□ -1.59
SSBP1-208ENST00000469123 HRCT1Q6UXD1 115 aa5.15□□□□□ -1.59
SSBP1-208ENST00000469123 A0A0U1RQV1 116 aa5.14□□□□□ -1.59
SSBP1-208ENST00000469123 EIF4EBP3O60516 100 aaPredicted RBP5.14□□□□□ -1.59
SSBP1-208ENST00000469123 KRTAP1-4P0C5Y4 121 aa5.14□□□□□ -1.59
SSBP1-208ENST00000469123 KRTAP10-8P60410 259 aa5.14□□□□□ -1.59
SSBP1-208ENST00000469123 LCE2AQ5TA79 106 aaPredicted RBP5.14□□□□□ -1.59
SSBP1-208ENST00000469123 Q6ZRX8 168 aa5.13□□□□□ -1.59
SSBP1-208ENST00000469123 MUSTN1Q8IVN3 82 aa5.13□□□□□ -1.59
SSBP1-208ENST00000469123 HIGD2AQ9BW72 106 aa5.13□□□□□ -1.59
SSBP1-208ENST00000469123 SMIM26A0A096LP01 95 aa5.12□□□□□ -1.59
SSBP1-208ENST00000469123 TRBV7-6A0A0J9YX20 115 aa5.12□□□□□ -1.59
SSBP1-208ENST00000469123 HIST1H4GQ99525 98 aa5.12□□□□□ -1.59
SSBP1-208ENST00000469123 LRP1Q07954 4544 aaKnown RBP5.11□□□□□ -1.59
SSBP1-208ENST00000469123 FAM236DA0A1B0GTK5 79 aa5.11□□□□□ -1.59
SSBP1-208ENST00000469123 ATOX1O00244 68 aa5.11□□□□□ -1.59
SSBP1-208ENST00000469123 FAM236CP0DP71 79 aa5.11□□□□□ -1.59
SSBP1-208ENST00000469123 SMCPP49901 116 aaPredicted RBP5.11□□□□□ -1.59
SSBP1-208ENST00000469123 DHRS4-AS1Q9P1J3 65 aa5.11□□□□□ -1.59
SSBP1-208ENST00000469123 PRR26Q8N8Z3 221 aa5.1□□□□□ -1.59
SSBP1-208ENST00000469123 SMCR5Q8TEV8 140 aa5.1□□□□□ -1.59
SSBP1-208ENST00000469123 SPRR4Q96PI1 79 aa5.1□□□□□ -1.59
SSBP1-208ENST00000469123 SERP1Q9Y6X1 66 aa5.1□□□□□ -1.59
SSBP1-208ENST00000469123 FAT3Q8TDW7 4589 aa5.1□□□□□ -1.59
SSBP1-208ENST00000469123 FAM236AA0A1B0GUQ0 79 aa5.09□□□□□ -1.59
SSBP1-208ENST00000469123 FAM236BA0A1B0GV22 79 aa5.09□□□□□ -1.59
SSBP1-208ENST00000469123 ELOF1P60002 83 aaKnown RBP5.09□□□□□ -1.59
SSBP1-208ENST00000469123 COX7BP24311 80 aa5.08□□□□□ -1.6
SSBP1-208ENST00000469123 HIST1H4AP62805 103 aaKnown RBP5.08□□□□□ -1.6
SSBP1-208ENST00000469123 C6orf99Q4VX62 202 aa5.08□□□□□ -1.6
SSBP1-208ENST00000469123 LINC00483Q53H64 154 aa5.08□□□□□ -1.6
SSBP1-208ENST00000469123 TYMSOSQ8TAI1 123 aa5.08□□□□□ -1.6
SSBP1-208ENST00000469123 NHP2Q9NX24 153 aaKnown RBP5.08□□□□□ -1.6
SSBP1-208ENST00000469123 A0A087X002 238 aa5.07□□□□□ -1.6
SSBP1-208ENST00000469123 LINC00643Q86TS7 51 aa5.07□□□□□ -1.6
SSBP1-208ENST00000469123 PRR15Q8IV56 129 aa5.07□□□□□ -1.6
SSBP1-208ENST00000469123 Q9BRP9 147 aa5.07□□□□□ -1.6
SSBP1-208ENST00000469123 FXYD2P54710 66 aa5.06□□□□□ -1.6
SSBP1-208ENST00000469123 A0A0B4J2C4 111 aa5.05□□□□□ -1.6
SSBP1-208ENST00000469123 H3BT86 120 aa5.05□□□□□ -1.6
SSBP1-208ENST00000469123 SLC25A20O43772 301 aa5.05□□□□□ -1.6
SSBP1-208ENST00000469123 SMIM11BQ8TCY0 68 aa5.05□□□□□ -1.6
SSBP1-208ENST00000469123 TNXBP22105 4242 aa5.05□□□□□ -1.6
SSBP1-208ENST00000469123 ATP5EP56381 51 aaPredicted RBP5.04□□□□□ -1.6
SSBP1-208ENST00000469123 KRTAP13-2Q52LG2 175 aa5.04□□□□□ -1.6
SSBP1-208ENST00000469123 SPAG11AQ6PDA7 123 aa5.04□□□□□ -1.6
SSBP1-208ENST00000469123 SERP2Q8N6R1 65 aa5.04□□□□□ -1.6
SSBP1-208ENST00000469123 ANAPC11Q9NYG5 84 aa5.04□□□□□ -1.6
SSBP1-208ENST00000469123 HERC1Q15751 4861 aa5.03□□□□□ -1.6
SSBP1-208ENST00000469123 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
SSBP1-208ENST00000469123 ERC2-IT1O76042 136 aa5.03□□□□□ -1.6
SSBP1-208ENST00000469123 SPRR1BP22528 89 aa5.03□□□□□ -1.6
SSBP1-208ENST00000469123 SSBP3-AS1Q7Z2R9 100 aa5.03□□□□□ -1.6
SSBP1-208ENST00000469123 LINC00304Q8N9R0 145 aa5.03□□□□□ -1.6
SSBP1-208ENST00000469123 KRTAP4-6Q9BYQ5 205 aa5.03□□□□□ -1.6
SSBP1-208ENST00000469123 CFC1BP0CG36 223 aa5.02□□□□□ -1.61
SSBP1-208ENST00000469123 CFC1P0CG37 223 aa5.02□□□□□ -1.61
SSBP1-208ENST00000469123 TEX49A0A1B0GTD5 131 aa5.01□□□□□ -1.61
SSBP1-208ENST00000469123 TCL1BO95988 128 aa5.01□□□□□ -1.61
SSBP1-208ENST00000469123 H0YGX0 51 aa5□□□□□ -1.61
SSBP1-208ENST00000469123 Q8NBF4 154 aa5□□□□□ -1.61
SSBP1-208ENST00000469123 PRO1854Q9UHT4 67 aa5□□□□□ -1.61
SSBP1-208ENST00000469123 IGLV5-48A0A075B6I7 105 aa4.99□□□□□ -1.61
SSBP1-208ENST00000469123 hADV29S1A0JD25 119 aa4.99□□□□□ -1.61
SSBP1-208ENST00000469123 SPINK1P00995 79 aa4.99□□□□□ -1.61
SSBP1-208ENST00000469123 GHRHP01286 108 aa4.99□□□□□ -1.61
SSBP1-208ENST00000469123 RPS29P62273 56 aaKnown RBP4.99□□□□□ -1.61
SSBP1-208ENST00000469123 Q1RN00 199 aa4.99□□□□□ -1.61
SSBP1-208ENST00000469123 LINC00575Q6W349 94 aa4.99□□□□□ -1.61
SSBP1-208ENST00000469123 ST20-AS1Q8NBB2 130 aa4.99□□□□□ -1.61
SSBP1-208ENST00000469123 IGLV9-49A0A0B4J1Y8 123 aa4.98□□□□□ -1.61
SSBP1-208ENST00000469123 PSMB2P49721 201 aa4.98□□□□□ -1.61
SSBP1-208ENST00000469123 MOBPQ13875 183 aa4.98□□□□□ -1.61
SSBP1-208ENST00000469123 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.98□□□□□ -1.61
SSBP1-208ENST00000469123 H7C2G1 150 aa4.97□□□□□ -1.61
SSBP1-208ENST00000469123 NDUFC1O43677 76 aa4.97□□□□□ -1.61
SSBP1-208ENST00000469123 F8WEM9 126 aa4.96□□□□□ -1.62
SSBP1-208ENST00000469123 COX6CP09669 75 aa4.96□□□□□ -1.62
SSBP1-208ENST00000469123 ATXN8Q156A1 80 aa4.96□□□□□ -1.62
SSBP1-208ENST00000469123 H3BQ85 93 aa4.95□□□□□ -1.62
SSBP1-208ENST00000469123 LINC01547P58512 204 aaPredicted RBP4.95□□□□□ -1.62
SSBP1-208ENST00000469123 LCE2CQ5TA81 110 aa4.95□□□□□ -1.62
SSBP1-208ENST00000469123 Q6ZQY7 126 aa4.95□□□□□ -1.62
SSBP1-208ENST00000469123 DEFB105AQ8NG35 78 aa4.95□□□□□ -1.62
SSBP1-208ENST00000469123 K7ERJ3 54 aa4.94□□□□□ -1.62
SSBP1-208ENST00000469123 NDUFS5O43920 106 aa4.94□□□□□ -1.62
SSBP1-208ENST00000469123 FP248Q71RG6 208 aaPredicted RBP4.94□□□□□ -1.62
SSBP1-208ENST00000469123 DSCR8Q96T75 97 aa4.94□□□□□ -1.62
SSBP1-208ENST00000469123 PRR4Q16378 134 aa4.93□□□□□ -1.62
SSBP1-208ENST00000469123 Q8N377 158 aa4.93□□□□□ -1.62
SSBP1-208ENST00000469123 BRK1Q8WUW1 75 aa4.93□□□□□ -1.62
SSBP1-208ENST00000469123 LIMD2Q9BT23 127 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms