RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 C9orf129Q5T035 196 aaKnown RBP4.38□□□□□ -1.71
SCAF4-204ENST00000467731 KRTAP10-1P60331 282 aa4.37□□□□□ -1.71
SCAF4-204ENST00000467731 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.37□□□□□ -1.71
SCAF4-204ENST00000467731 LCA10Q71F78 164 aa4.36□□□□□ -1.71
SCAF4-204ENST00000467731 LINC00308Q8TCZ7 52 aa4.36□□□□□ -1.71
SCAF4-204ENST00000467731 FAM168BA1KXE4 195 aa4.36□□□□□ -1.71
SCAF4-204ENST00000467731 OBSCN-AS1Q96MR7 158 aa4.36□□□□□ -1.71
SCAF4-204ENST00000467731 FAM30AQ9NZY2 134 aa4.36□□□□□ -1.71
SCAF4-204ENST00000467731 APOBP04114 4563 aaKnown RBP4.36□□□□□ -1.71
SCAF4-204ENST00000467731 A8MUN3 132 aa4.35□□□□□ -1.71
SCAF4-204ENST00000467731 SPACA4Q8TDM5 124 aa4.35□□□□□ -1.71
SCAF4-204ENST00000467731 Q8NDZ9 215 aa4.35□□□□□ -1.71
SCAF4-204ENST00000467731 C14orf132Q9NPU4 83 aa4.35□□□□□ -1.71
SCAF4-204ENST00000467731 A0A1W2PNN7 141 aa4.34□□□□□ -1.71
SCAF4-204ENST00000467731 Q6ZSA8 131 aa4.34□□□□□ -1.71
SCAF4-204ENST00000467731 A0A087WYN8 130 aa4.34□□□□□ -1.72
SCAF4-204ENST00000467731 KRTAP7-1Q8IUC3 87 aa4.34□□□□□ -1.72
SCAF4-204ENST00000467731 VPS13BQ7Z7G8 4022 aa4.34□□□□□ -1.72
SCAF4-204ENST00000467731 PRR3P79522 188 aaKnown RBP4.33□□□□□ -1.72
SCAF4-204ENST00000467731 HAMPP81172 84 aa4.33□□□□□ -1.72
SCAF4-204ENST00000467731 ATP11AUNQ6ZP68 121 aa4.33□□□□□ -1.72
SCAF4-204ENST00000467731 C7orf65Q6ZTY9 151 aa4.33□□□□□ -1.72
SCAF4-204ENST00000467731 DIRC1Q969H9 104 aa4.33□□□□□ -1.72
SCAF4-204ENST00000467731 TRBV7-4A0A0J9YYF1 115 aa4.32□□□□□ -1.72
SCAF4-204ENST00000467731 ERC2-IT1O76042 136 aa4.32□□□□□ -1.72
SCAF4-204ENST00000467731 PLA2G2DQ9UNK4 145 aa4.32□□□□□ -1.72
SCAF4-204ENST00000467731 NCR3O14931 201 aa4.32□□□□□ -1.72
SCAF4-204ENST00000467731 SCXQ7RTU7 201 aa4.32□□□□□ -1.72
SCAF4-204ENST00000467731 CIRBP-AS1Q8TBR5 109 aa4.32□□□□□ -1.72
SCAF4-204ENST00000467731 IGKV2-28A0A075B6P5 120 aa4.32□□□□□ -1.72
SCAF4-204ENST00000467731 IGKV2D-28P01615 120 aa4.32□□□□□ -1.72
SCAF4-204ENST00000467731 NKAPP1Q8N9T2 125 aa4.32□□□□□ -1.72
SCAF4-204ENST00000467731 TRAV22A0A0B4J277 110 aa4.31□□□□□ -1.72
SCAF4-204ENST00000467731 hDV103S1A0JD37 113 aa4.31□□□□□ -1.72
SCAF4-204ENST00000467731 PSPHP1O15172 72 aa4.31□□□□□ -1.72
SCAF4-204ENST00000467731 PLAC8Q9NZF1 115 aa4.31□□□□□ -1.72
SCAF4-204ENST00000467731 IGLV5-37A0A075B6J1 123 aa4.31□□□□□ -1.72
SCAF4-204ENST00000467731 A6NN06 94 aa4.31□□□□□ -1.72
SCAF4-204ENST00000467731 TMEM254Q8TBM7 123 aa4.31□□□□□ -1.72
SCAF4-204ENST00000467731 UBL5Q9BZL1 73 aa4.31□□□□□ -1.72
SCAF4-204ENST00000467731 HSPG2P98160 4391 aa4.3□□□□□ -1.72
SCAF4-204ENST00000467731 UBE2AP49459 152 aa4.3□□□□□ -1.72
SCAF4-204ENST00000467731 LINC00337Q8N6G1 96 aa4.3□□□□□ -1.72
SCAF4-204ENST00000467731 FAM218AQ96MZ4 157 aa4.3□□□□□ -1.72
SCAF4-204ENST00000467731 C7orf33Q8WU49 177 aa4.29□□□□□ -1.72
SCAF4-204ENST00000467731 LINC00167Q96N53 147 aa4.29□□□□□ -1.72
SCAF4-204ENST00000467731 FAT1Q14517 4588 aa4.29□□□□□ -1.72
SCAF4-204ENST00000467731 KIAA1109Q2LD37 5005 aa4.29□□□□□ -1.72
SCAF4-204ENST00000467731 RPL37AP8A6NKH3 93 aa4.29□□□□□ -1.72
SCAF4-204ENST00000467731 RYR1P21817 5038 aa4.28□□□□□ -1.72
SCAF4-204ENST00000467731 PRYO14603 147 aa4.28□□□□□ -1.72
SCAF4-204ENST00000467731 SPTSSBQ8NFR3 76 aa4.28□□□□□ -1.72
SCAF4-204ENST00000467731 IGLV6-57P01721 117 aa4.28□□□□□ -1.72
SCAF4-204ENST00000467731 KRTAP11-1Q8IUC1 163 aa4.28□□□□□ -1.72
SCAF4-204ENST00000467731 IGLV1-50A0A075B6I6 118 aa4.27□□□□□ -1.73
SCAF4-204ENST00000467731 CXCL6P80162 114 aa4.27□□□□□ -1.73
SCAF4-204ENST00000467731 LCE2DQ5TA82 110 aaPredicted RBP4.27□□□□□ -1.73
SCAF4-204ENST00000467731 A8MU10 97 aa4.27□□□□□ -1.73
SCAF4-204ENST00000467731 SRRM2Q9UQ35 2752 aaKnown RBP4.26□□□□□ -1.73
SCAF4-204ENST00000467731 HCG22E2RYF7 251 aa4.26□□□□□ -1.73
SCAF4-204ENST00000467731 JMJD7-PLA2G4BH0Y9G9 81 aa4.26□□□□□ -1.73
SCAF4-204ENST00000467731 CDK2AP2O75956 126 aa4.26□□□□□ -1.73
SCAF4-204ENST00000467731 SMR3BP02814 79 aaPredicted RBP4.26□□□□□ -1.73
SCAF4-204ENST00000467731 LINC00313P59037 77 aa4.26□□□□□ -1.73
SCAF4-204ENST00000467731 NREPQ16612 68 aa4.26□□□□□ -1.73
SCAF4-204ENST00000467731 H0YGX0 51 aa4.25□□□□□ -1.73
SCAF4-204ENST00000467731 Q5VV11 94 aa4.25□□□□□ -1.73
SCAF4-204ENST00000467731 LINC01554Q52M75 96 aa4.25□□□□□ -1.73
SCAF4-204ENST00000467731 KCNQ1DNQ9H478 68 aa4.25□□□□□ -1.73
SCAF4-204ENST00000467731 PSORS1C2Q9UIG4 136 aa4.25□□□□□ -1.73
SCAF4-204ENST00000467731 BIRC6Q9NR09 4857 aa4.25□□□□□ -1.73
SCAF4-204ENST00000467731 C1orf64Q8NEQ6 169 aa4.24□□□□□ -1.73
SCAF4-204ENST00000467731 SMIM11BQ8TCY0 68 aa4.24□□□□□ -1.73
SCAF4-204ENST00000467731 MP68P56378 58 aa4.24□□□□□ -1.73
SCAF4-204ENST00000467731 REG3GQ6UW15 175 aa4.24□□□□□ -1.73
SCAF4-204ENST00000467731 CHKB-CPT1BH3BT56 60 aa4.23□□□□□ -1.73
SCAF4-204ENST00000467731 LINC01547P58512 204 aaPredicted RBP4.23□□□□□ -1.73
SCAF4-204ENST00000467731 ORMDL1Q9P0S3 153 aa4.23□□□□□ -1.73
SCAF4-204ENST00000467731 C6orf99Q4VX62 202 aa4.23□□□□□ -1.73
SCAF4-204ENST00000467731 LINC00528Q8N1L1 170 aa4.23□□□□□ -1.73
SCAF4-204ENST00000467731 CYP4F30PQ9H0H9 118 aa4.23□□□□□ -1.73
SCAF4-204ENST00000467731 SPRR1AP35321 89 aa4.23□□□□□ -1.73
SCAF4-204ENST00000467731 C1orf137Q5JT78 98 aa4.23□□□□□ -1.73
SCAF4-204ENST00000467731 KRTAP4-16G5E9R7 235 aaPredicted RBP4.22□□□□□ -1.73
SCAF4-204ENST00000467731 PRLHP81277 87 aa4.21□□□□□ -1.74
SCAF4-204ENST00000467731 ETDCA0A1B0GVM5 59 aa4.21□□□□□ -1.74
SCAF4-204ENST00000467731 LIMD2Q9BT23 127 aa4.21□□□□□ -1.74
SCAF4-204ENST00000467731 BPY2O14599 106 aa4.2□□□□□ -1.74
SCAF4-204ENST00000467731 RPL37AP61513 92 aaKnown RBP4.2□□□□□ -1.74
SCAF4-204ENST00000467731 A0A0A0MQY5 61 aa4.2□□□□□ -1.74
SCAF4-204ENST00000467731 ELOF1P60002 83 aaKnown RBP4.2□□□□□ -1.74
SCAF4-204ENST00000467731 Q6ZRX8 168 aa4.2□□□□□ -1.74
SCAF4-204ENST00000467731 KRTAP17-1Q9BYP8 105 aa4.2□□□□□ -1.74
SCAF4-204ENST00000467731 COX7BP24311 80 aa4.19□□□□□ -1.74
SCAF4-204ENST00000467731 H0Y9J4 135 aa4.19□□□□□ -1.74
SCAF4-204ENST00000467731 FAM229AH3BQW9 127 aa4.19□□□□□ -1.74
SCAF4-204ENST00000467731 IGLV7-43P04211 117 aa4.19□□□□□ -1.74
SCAF4-204ENST00000467731 Q5VSD8 79 aa4.19□□□□□ -1.74
SCAF4-204ENST00000467731 KRTAP13-1Q8IUC0 172 aa4.19□□□□□ -1.74
SCAF4-204ENST00000467731 Q9BRP9 147 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms