RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 R4GMQ9 66 aa3.38□□□□□ -1.87
LRCH3-212ENST00000466845 ZNF469Q96JG9 3925 aaPredicted RBP3.37□□□□□ -1.87
LRCH3-212ENST00000466845 VPS13CQ709C8 3753 aa3.37□□□□□ -1.87
LRCH3-212ENST00000466845 PDE6GP18545 87 aa3.37□□□□□ -1.87
LRCH3-212ENST00000466845 DEFB116Q30KQ4 102 aa3.37□□□□□ -1.87
LRCH3-212ENST00000466845 ABCA1O95477 2261 aa3.37□□□□□ -1.87
LRCH3-212ENST00000466845 ZANQ9Y493 2812 aa3.37□□□□□ -1.87
LRCH3-212ENST00000466845 A0A096LNT2 108 aa3.36□□□□□ -1.87
LRCH3-212ENST00000466845 JMJD7-PLA2G4BH0Y9G9 81 aa3.36□□□□□ -1.87
LRCH3-212ENST00000466845 UQCR11O14957 56 aa3.36□□□□□ -1.87
LRCH3-212ENST00000466845 ZNF861PO60384 105 aa3.36□□□□□ -1.87
LRCH3-212ENST00000466845 ATRQ13535 2644 aa3.36□□□□□ -1.87
LRCH3-212ENST00000466845 LYNX1G3V0Z9 82 aa3.35□□□□□ -1.87
LRCH3-212ENST00000466845 LYNX1P0DP58 116 aa3.35□□□□□ -1.87
LRCH3-212ENST00000466845 NDPQ00604 133 aa3.35□□□□□ -1.87
LRCH3-212ENST00000466845 C10orf113Q5VZT2 155 aa3.35□□□□□ -1.87
LRCH3-212ENST00000466845 WFDC10AQ9H1F0 79 aa3.35□□□□□ -1.87
LRCH3-212ENST00000466845 ALPK2Q86TB3 2170 aa3.35□□□□□ -1.87
LRCH3-212ENST00000466845 COL6A5A8TX70 2615 aa3.34□□□□□ -1.87
LRCH3-212ENST00000466845 RTTNQ86VV8 2226 aa3.34□□□□□ -1.87
LRCH3-212ENST00000466845 MGPP08493 103 aa3.34□□□□□ -1.87
LRCH3-212ENST00000466845 ZNF625Q96I27 306 aaPredicted RBP3.34□□□□□ -1.87
LRCH3-212ENST00000466845 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.33□□□□□ -1.887e-6■□□□□ 9.3
LRCH3-212ENST00000466845 STAB1Q9NY15 2570 aa3.33□□□□□ -1.88
LRCH3-212ENST00000466845 MXRA5Q9NR99 2828 aa3.33□□□□□ -1.88
LRCH3-212ENST00000466845 A0A087WTM6 91 aa3.33□□□□□ -1.88
LRCH3-212ENST00000466845 IGLV3-1P01715 115 aa3.33□□□□□ -1.88
LRCH3-212ENST00000466845 RNASE3P12724 160 aaKnown RBP3.33□□□□□ -1.88
LRCH3-212ENST00000466845 TYMSOSQ8TAI1 123 aa3.33□□□□□ -1.88
LRCH3-212ENST00000466845 KLK9Q9UKQ9 250 aa3.33□□□□□ -1.88
LRCH3-212ENST00000466845 LINC00959A0A1B0GUT2 108 aa3.32□□□□□ -1.88
LRCH3-212ENST00000466845 FAM168BA1KXE4 195 aa3.32□□□□□ -1.88
LRCH3-212ENST00000466845 LINC00612Q8N6U2 182 aa3.32□□□□□ -1.88
LRCH3-212ENST00000466845 GAFA1Q96PS6 74 aa3.32□□□□□ -1.88
LRCH3-212ENST00000466845 FBN3Q75N90 2809 aa3.32□□□□□ -1.88
LRCH3-212ENST00000466845 NDUFA4O00483 81 aa3.31□□□□□ -1.88
LRCH3-212ENST00000466845 TRGV4A0A0C4DH28 118 aa3.3□□□□□ -1.88
LRCH3-212ENST00000466845 DEFB114Q30KQ6 69 aa3.3□□□□□ -1.88
LRCH3-212ENST00000466845 PRO2289Q9P1D8 64 aa3.3□□□□□ -1.88
LRCH3-212ENST00000466845 FBN1P35555 2871 aaKnown RBP3.29□□□□□ -1.88
LRCH3-212ENST00000466845 LOC110117498A0A087WWA1 95 aa3.29□□□□□ -1.88
LRCH3-212ENST00000466845 DEFB112Q30KQ8 113 aa3.29□□□□□ -1.88
LRCH3-212ENST00000466845 COA5Q86WW8 74 aa3.29□□□□□ -1.88
LRCH3-212ENST00000466845 TNCP24821 2201 aa3.28□□□□□ -1.88
LRCH3-212ENST00000466845 H0YGX0 51 aa3.28□□□□□ -1.88
LRCH3-212ENST00000466845 DEFB108BQ8NET1 73 aa3.28□□□□□ -1.88
LRCH3-212ENST00000466845 LINC00472Q9H8W2 130 aa3.28□□□□□ -1.88
LRCH3-212ENST00000466845 WNK2Q9Y3S1 2297 aa3.27□□□□□ -1.89
LRCH3-212ENST00000466845 NBDYA0A0U1RRE5 68 aa3.27□□□□□ -1.89
LRCH3-212ENST00000466845 NCR3O14931 201 aa3.27□□□□□ -1.89
LRCH3-212ENST00000466845 RPS27P42677 84 aaKnown RBP3.27□□□□□ -1.89
LRCH3-212ENST00000466845 HAMPP81172 84 aa3.27□□□□□ -1.89
LRCH3-212ENST00000466845 SPINT4Q6UDR6 99 aa3.27□□□□□ -1.89
LRCH3-212ENST00000466845 DNHD1Q96M86 4753 aa3.26□□□□□ -1.89
LRCH3-212ENST00000466845 IGLV4-69A0A075B6H9 119 aa3.26□□□□□ -1.89
LRCH3-212ENST00000466845 IAPPP10997 89 aa3.26□□□□□ -1.89
LRCH3-212ENST00000466845 BRD3OSQ6XYD6 125 aa3.26□□□□□ -1.89
LRCH3-212ENST00000466845 C4orf3Q8WVX3 66 aa3.26□□□□□ -1.89
LRCH3-212ENST00000466845 ANK2Q01484 3957 aa3.25□□□□□ -1.89
LRCH3-212ENST00000466845 ARHGAP5-AS1Q96IT6 56 aa3.25□□□□□ -1.89
LRCH3-212ENST00000466845 PSORS1C2Q9UIG4 136 aa3.25□□□□□ -1.89
LRCH3-212ENST00000466845 R4GN34 69 aa3.25□□□□□ -1.89
LRCH3-212ENST00000466845 CUBNO60494 3623 aa3.25□□□□□ -1.89
LRCH3-212ENST00000466845 NBEAL1Q6ZS30 2694 aa3.25□□□□□ -1.89
LRCH3-212ENST00000466845 ETDCA0A1B0GVM5 59 aa3.24□□□□□ -1.89
LRCH3-212ENST00000466845 IGKV4-1P06312 121 aa3.24□□□□□ -1.89
LRCH3-212ENST00000466845 LINC01590Q5TEZ4 76 aa3.24□□□□□ -1.89
LRCH3-212ENST00000466845 Q6ZTI0 123 aa3.24□□□□□ -1.89
LRCH3-212ENST00000466845 TTTY10Q9BZA0 68 aa3.24□□□□□ -1.89
LRCH3-212ENST00000466845 KCNQ1DNQ9H478 68 aa3.24□□□□□ -1.89
LRCH3-212ENST00000466845 ANK3Q12955 4377 aaKnown RBP3.24□□□□□ -1.89
LRCH3-212ENST00000466845 IGLV4-60A0A075B6I1 120 aa3.23□□□□□ -1.89
LRCH3-212ENST00000466845 IGKV2-40A0A087WW87 121 aaPredicted RBP3.23□□□□□ -1.89
LRCH3-212ENST00000466845 TRBV6-4A0A1B0GX49 114 aa3.23□□□□□ -1.89
LRCH3-212ENST00000466845 IGKV2D-40P01614 121 aaPredicted RBP3.23□□□□□ -1.89
LRCH3-212ENST00000466845 KRTAP1-4P0C5Y4 121 aa3.23□□□□□ -1.89
LRCH3-212ENST00000466845 Q96NJ1 140 aa3.23□□□□□ -1.89
LRCH3-212ENST00000466845 KAAG1Q9UBP8 84 aa3.23□□□□□ -1.89
LRCH3-212ENST00000466845 TRGV2A0A075B6R0 118 aa3.22□□□□□ -1.89
LRCH3-212ENST00000466845 TENM1Q9UKZ4 2725 aa3.22□□□□□ -1.89
LRCH3-212ENST00000466845 SVEP1Q4LDE5 3571 aa3.22□□□□□ -1.89
LRCH3-212ENST00000466845 A0A1W2PNN7 141 aa3.21□□□□□ -1.9
LRCH3-212ENST00000466845 H3BSH0 61 aa3.21□□□□□ -1.9
LRCH3-212ENST00000466845 FXYD4P59646 89 aa3.21□□□□□ -1.9
LRCH3-212ENST00000466845 PRB3Q04118 309 aaPredicted RBP3.21□□□□□ -1.9
LRCH3-212ENST00000466845 KRTAP13-3Q3SY46 172 aa3.21□□□□□ -1.9
LRCH3-212ENST00000466845 MGAM2Q2M2H8 2515 aa3.2□□□□□ -1.9
LRCH3-212ENST00000466845 IGKV2-29A2NJV5 120 aaPredicted RBP3.2□□□□□ -1.9
LRCH3-212ENST00000466845 H3BUX3 64 aa3.2□□□□□ -1.9
LRCH3-212ENST00000466845 RPL37AP61513 92 aaKnown RBP3.2□□□□□ -1.9
LRCH3-212ENST00000466845 COX17Q14061 63 aa3.2□□□□□ -1.9
LRCH3-212ENST00000466845 LY6EQ16553 131 aa3.2□□□□□ -1.9
LRCH3-212ENST00000466845 C5orf56Q8N8D9 126 aa3.2□□□□□ -1.9
LRCH3-212ENST00000466845 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.19□□□□□ -1.9
LRCH3-212ENST00000466845 TRGV1A0A0A0MS02 117 aa3.19□□□□□ -1.9
LRCH3-212ENST00000466845 PRB2P02812 416 aaPredicted RBP3.19□□□□□ -1.9
LRCH3-212ENST00000466845 COX7BP24311 80 aa3.19□□□□□ -1.9
LRCH3-212ENST00000466845 KRTAP12-2P59991 146 aa3.19□□□□□ -1.9
LRCH3-212ENST00000466845 LINC00304Q8N9R0 145 aa3.19□□□□□ -1.9
LRCH3-212ENST00000466845 CNFNQ9BYD5 112 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms