RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 SNRPFP62306 86 aaKnown RBP-0.58□□□□□ -2.5
SSB-207ENST00000465871 RGPD1P0DJD0 1748 aa-0.58□□□□□ -2.5
SSB-207ENST00000465871 ANKRD26Q9UPS8 1709 aa-0.58□□□□□ -2.5
SSB-207ENST00000465871 FAM186AA6NE01 2351 aa-0.59□□□□□ -2.5
SSB-207ENST00000465871 LRRK2Q5S007 2527 aa-0.59□□□□□ -2.5
SSB-207ENST00000465871 UTP20O75691 2785 aaKnown RBP-0.59□□□□□ -2.5
SSB-207ENST00000465871 AKAP12Q02952 1782 aa-0.59□□□□□ -2.5
SSB-207ENST00000465871 ACYP1P07311 99 aa-0.59□□□□□ -2.5
SSB-207ENST00000465871 DEFB130BP0DP73 79 aa-0.59□□□□□ -2.5
SSB-207ENST00000465871 DEFB130AP0DP74 79 aa-0.59□□□□□ -2.5
SSB-207ENST00000465871 IAPPP10997 89 aa-0.59□□□□□ -2.5
SSB-207ENST00000465871 NOP10Q9NPE3 64 aaKnown RBP-0.59□□□□□ -2.5
SSB-207ENST00000465871 V9GYS6 101 aa-0.59□□□□□ -2.5
SSB-207ENST00000465871 CEP162Q5TB80 1403 aa-0.59□□□□□ -2.5
SSB-207ENST00000465871 PLIN4Q96Q06 1357 aa-0.59□□□□□ -2.5
SSB-207ENST00000465871 MAP3K1Q13233 1512 aa-0.59□□□□□ -2.5
SSB-207ENST00000465871 KALRNO60229 2985 aa-0.6□□□□□ -2.5
SSB-207ENST00000465871 MYO3AQ8NEV4 1616 aa-0.6□□□□□ -2.5
SSB-207ENST00000465871 VPS13DQ5THJ4 4388 aa-0.6□□□□□ -2.51
SSB-207ENST00000465871 C4AP0C0L4 1744 aa-0.6□□□□□ -2.51
SSB-207ENST00000465871 C4BP0C0L5 1744 aa-0.6□□□□□ -2.51
SSB-207ENST00000465871 H3BUA1 57 aa-0.6□□□□□ -2.51
SSB-207ENST00000465871 NDUFB1O75438 58 aa-0.6□□□□□ -2.51
SSB-207ENST00000465871 MT1EP04732 61 aa-0.6□□□□□ -2.51
SSB-207ENST00000465871 SPART-AS1P0CW21 52 aa-0.6□□□□□ -2.51
SSB-207ENST00000465871 BVES-AS1Q5T3Y7 98 aa-0.6□□□□□ -2.51
SSB-207ENST00000465871 LINC00643Q86TS7 51 aa-0.6□□□□□ -2.51
SSB-207ENST00000465871 NBEAQ8NFP9 2946 aa-0.6□□□□□ -2.51
SSB-207ENST00000465871 NBEAL2Q6ZNJ1 2754 aa-0.61□□□□□ -2.51
SSB-207ENST00000465871 ACACBO00763 2458 aa-0.61□□□□□ -2.51
SSB-207ENST00000465871 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.61□□□□□ -2.51
SSB-207ENST00000465871 MRPL33O75394 65 aaKnown RBP-0.61□□□□□ -2.51
SSB-207ENST00000465871 MT1LQ93083 61 aa-0.61□□□□□ -2.51
SSB-207ENST00000465871 EPPK1P58107 5090 aaKnown RBP-0.61□□□□□ -2.51
SSB-207ENST00000465871 VPS13BQ7Z7G8 4022 aa-0.61□□□□□ -2.51
SSB-207ENST00000465871 FAT3Q8TDW7 4589 aa-0.62□□□□□ -2.51
SSB-207ENST00000465871 RGPD4Q7Z3J3 1758 aa-0.62□□□□□ -2.51
SSB-207ENST00000465871 IGLV5-48A0A075B6I7 105 aa-0.62□□□□□ -2.51
SSB-207ENST00000465871 PVALEFA0A1B0GWK0 134 aa-0.62□□□□□ -2.51
SSB-207ENST00000465871 SMR3BP02814 79 aaPredicted RBP-0.62□□□□□ -2.51
SSB-207ENST00000465871 KRTAP19-5Q3LI72 72 aa-0.62□□□□□ -2.51
SSB-207ENST00000465871 SUPT6HQ7KZ85 1726 aaKnown RBP-0.62□□□□□ -2.51
SSB-207ENST00000465871 MAGI3Q5TCQ9 1506 aa-0.63□□□□□ -2.51
SSB-207ENST00000465871 UBR1Q8IWV7 1749 aa-0.63□□□□□ -2.51
SSB-207ENST00000465871 CELSR3Q9NYQ7 3312 aa-0.63□□□□□ -2.51
SSB-207ENST00000465871 GCN1Q92616 2671 aaKnown RBP-0.63□□□□□ -2.51
SSB-207ENST00000465871 LINC01546A6NGU7 62 aa-0.63□□□□□ -2.51
SSB-207ENST00000465871 LYNX1G3V0Z9 82 aa-0.63□□□□□ -2.51
SSB-207ENST00000465871 WT1-ASQ06250 92 aa-0.63□□□□□ -2.51
SSB-207ENST00000465871 MT1MQ8N339 61 aa-0.63□□□□□ -2.51
SSB-207ENST00000465871 RABAC1Q9UI14 185 aa-0.63□□□□□ -2.51
SSB-207ENST00000465871 CCNB3Q8WWL7 1395 aa-0.63□□□□□ -2.51
SSB-207ENST00000465871 CEP290O15078 2479 aa-0.63□□□□□ -2.51
SSB-207ENST00000465871 RGPD3A6NKT7 1758 aaPredicted RBP-0.64□□□□□ -2.51
SSB-207ENST00000465871 NCOA2Q15596 1464 aa-0.64□□□□□ -2.51
SSB-207ENST00000465871 UMAD1C9J7I0 102 aa-0.64□□□□□ -2.51
SSB-207ENST00000465871 MT2AP02795 61 aa-0.64□□□□□ -2.51
SSB-207ENST00000465871 MT1BP07438 61 aa-0.64□□□□□ -2.51
SSB-207ENST00000465871 MT1GP13640 62 aa-0.64□□□□□ -2.51
SSB-207ENST00000465871 HMGA1P17096 107 aaKnown RBP-0.64□□□□□ -2.51
SSB-207ENST00000465871 HYDINQ4G0P3 5121 aa-0.65□□□□□ -2.51
SSB-207ENST00000465871 MINOS1Q5TGZ0 78 aa-0.65□□□□□ -2.51
SSB-207ENST00000465871 A0A0C4DFX4 3053 aa-0.65□□□□□ -2.51
SSB-207ENST00000465871 USP32Q8NFA0 1604 aa-0.65□□□□□ -2.51
SSB-207ENST00000465871 LTN1O94822 1766 aa-0.65□□□□□ -2.51
SSB-207ENST00000465871 COL12A1Q99715 3063 aa-0.66□□□□□ -2.51
SSB-207ENST00000465871 NWD1Q149M9 1564 aa-0.66□□□□□ -2.51
SSB-207ENST00000465871 POLR1AO95602 1720 aaPredicted RBP-0.66□□□□□ -2.51
SSB-207ENST00000465871 KANTRA0A1W2PQU2 76 aa-0.66□□□□□ -2.52
SSB-207ENST00000465871 M0QY20 66 aa-0.66□□□□□ -2.52
SSB-207ENST00000465871 M0QZ58 72 aa-0.66□□□□□ -2.52
SSB-207ENST00000465871 DEFB4AO15263 64 aa-0.66□□□□□ -2.52
SSB-207ENST00000465871 FCER1GP30273 86 aa-0.66□□□□□ -2.52
SSB-207ENST00000465871 KRTAP8-1Q8IUC2 63 aa-0.66□□□□□ -2.52
SSB-207ENST00000465871 ABRACLQ9P1F3 81 aa-0.66□□□□□ -2.52
SSB-207ENST00000465871 URB2Q14146 1524 aaKnown RBP-0.66□□□□□ -2.52
SSB-207ENST00000465871 TIAM2Q8IVF5 1701 aa-0.67□□□□□ -2.52
SSB-207ENST00000465871 COL6A5A8TX70 2615 aa-0.67□□□□□ -2.52
SSB-207ENST00000465871 TRIOO75962 3097 aa-0.67□□□□□ -2.52
SSB-207ENST00000465871 SCN11AQ9UI33 1791 aa-0.67□□□□□ -2.52
SSB-207ENST00000465871 WDR87Q6ZQQ6 2873 aa-0.67□□□□□ -2.52
SSB-207ENST00000465871 A0A087WXM4 84 aa-0.67□□□□□ -2.52
SSB-207ENST00000465871 A8MTW9 85 aa-0.67□□□□□ -2.52
SSB-207ENST00000465871 NDUFA4O00483 81 aa-0.67□□□□□ -2.52
SSB-207ENST00000465871 UBL5Q9BZL1 73 aa-0.67□□□□□ -2.52
SSB-207ENST00000465871 LAMA3Q16787 3333 aa-0.67□□□□□ -2.52
SSB-207ENST00000465871 CDC42BPGQ6DT37 1551 aa-0.67□□□□□ -2.52
SSB-207ENST00000465871 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.67□□□□□ -2.52
SSB-207ENST00000465871 DOT1LQ8TEK3 1739 aa-0.67□□□□□ -2.52
SSB-207ENST00000465871 DEPDC5O75140 1603 aa-0.67□□□□□ -2.52
SSB-207ENST00000465871 KIAA1109Q2LD37 5005 aa-0.67□□□□□ -2.52
SSB-207ENST00000465871 DEFB131BA0A096LNP1 70 aa-0.68□□□□□ -2.52
SSB-207ENST00000465871 TEX15Q9BXT5 2789 aa-0.68□□□□□ -2.52
SSB-207ENST00000465871 NESP48681 1621 aa-0.68□□□□□ -2.52
SSB-207ENST00000465871 MUC17Q685J3 4493 aa-0.68□□□□□ -2.52
SSB-207ENST00000465871 BIRC6Q9NR09 4857 aa-0.69□□□□□ -2.52
SSB-207ENST00000465871 CDC42BPAQ5VT25 1732 aa-0.69□□□□□ -2.52
SSB-207ENST00000465871 KRTAP20-1Q3LI63 56 aa-0.69□□□□□ -2.52
SSB-207ENST00000465871 TDRG1Q3Y452 100 aa-0.69□□□□□ -2.52
SSB-207ENST00000465871 C6orf48Q9UBA6 75 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms