RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 SPINK1P00995 79 aa7.09□□□□□ -1.27
CHPF2-202ENST00000465601 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.08□□□□□ -1.28
CHPF2-202ENST00000465601 FAM218AQ96MZ4 157 aa7.07□□□□□ -1.28
CHPF2-202ENST00000465601 TRIAP1O43715 76 aa7.06□□□□□ -1.28
CHPF2-202ENST00000465601 HRCT1Q6UXD1 115 aa7.06□□□□□ -1.28
CHPF2-202ENST00000465601 SNCGO76070 127 aa7.05□□□□□ -1.28
CHPF2-202ENST00000465601 PSMB2P49721 201 aa7.05□□□□□ -1.28
CHPF2-202ENST00000465601 A0A0G2JQZ4 141 aa7.04□□□□□ -1.28
CHPF2-202ENST00000465601 F8WEM9 126 aa7.03□□□□□ -1.28
CHPF2-202ENST00000465601 RPS29P62273 56 aaKnown RBP7.03□□□□□ -1.28
CHPF2-202ENST00000465601 CLEC2BQ92478 149 aa7.03□□□□□ -1.28
CHPF2-202ENST00000465601 IGLV7-46A0A075B6I9 117 aa7.02□□□□□ -1.29
CHPF2-202ENST00000465601 TSTD3H0UI37 97 aa7.02□□□□□ -1.29
CHPF2-202ENST00000465601 M0R143 59 aa7.02□□□□□ -1.29
CHPF2-202ENST00000465601 SNHG12Q9BXW3 62 aa7.02□□□□□ -1.29
CHPF2-202ENST00000465601 A0A1B0GX51 115 aa7.01□□□□□ -1.29
CHPF2-202ENST00000465601 COX6CP09669 75 aa7.01□□□□□ -1.29
CHPF2-202ENST00000465601 PPDPFLQ8WWR9 84 aa7.01□□□□□ -1.29
CHPF2-202ENST00000465601 OCIAD2Q56VL3 154 aa7□□□□□ -1.29
CHPF2-202ENST00000465601 CD164Q04900 197 aa6.99□□□□□ -1.29
CHPF2-202ENST00000465601 IGLV8-61A0A075B6I0 122 aa6.98□□□□□ -1.29
CHPF2-202ENST00000465601 SCGB1C2P0DMR2 95 aa6.98□□□□□ -1.29
CHPF2-202ENST00000465601 FP248Q71RG6 208 aaPredicted RBP6.98□□□□□ -1.29
CHPF2-202ENST00000465601 Q6JHZ5 121 aa6.97□□□□□ -1.29
CHPF2-202ENST00000465601 LIMD2Q9BT23 127 aa6.97□□□□□ -1.29
CHPF2-202ENST00000465601 H3BUT2 72 aa6.96□□□□□ -1.3
CHPF2-202ENST00000465601 DNAL4O96015 105 aa6.96□□□□□ -1.3
CHPF2-202ENST00000465601 FABP2P12104 132 aa6.96□□□□□ -1.3
CHPF2-202ENST00000465601 NDUFV3P56181 108 aaKnown RBP6.96□□□□□ -1.3
CHPF2-202ENST00000465601 IGFL1Q6UW32 110 aa6.96□□□□□ -1.3
CHPF2-202ENST00000465601 GHRHP01286 108 aa6.95□□□□□ -1.3
CHPF2-202ENST00000465601 BATFQ16520 125 aa6.95□□□□□ -1.3
CHPF2-202ENST00000465601 TPRXLQ17RH7 258 aa6.94□□□□□ -1.3
CHPF2-202ENST00000465601 NAA38Q9BRA0 125 aaKnown RBP6.94□□□□□ -1.3
CHPF2-202ENST00000465601 ORMDL1Q9P0S3 153 aa6.94□□□□□ -1.3
CHPF2-202ENST00000465601 CDIP1Q9H305 208 aa6.93□□□□□ -1.3
CHPF2-202ENST00000465601 RNF213Q63HN8 5207 aa6.93□□□□□ -1.3
CHPF2-202ENST00000465601 LST1O00453 97 aa6.92□□□□□ -1.3
CHPF2-202ENST00000465601 Q5XG85 94 aa6.92□□□□□ -1.3
CHPF2-202ENST00000465601 H3BMG7 143 aa6.91□□□□□ -1.3
CHPF2-202ENST00000465601 TRACP01848 142 aa6.91□□□□□ -1.3
CHPF2-202ENST00000465601 KRTAP13-3Q3SY46 172 aa6.91□□□□□ -1.3
CHPF2-202ENST00000465601 TRBV7-7A0A0K0K1E9 115 aa6.9□□□□□ -1.3
CHPF2-202ENST00000465601 H3BQ85 93 aa6.9□□□□□ -1.3
CHPF2-202ENST00000465601 TMEM256-PLSCR3K7ERE1 68 aa6.89□□□□□ -1.31
CHPF2-202ENST00000465601 TCL1BO95988 128 aa6.89□□□□□ -1.31
CHPF2-202ENST00000465601 C1orf195Q5TG92 126 aa6.89□□□□□ -1.31
CHPF2-202ENST00000465601 A0A1B0GV72 72 aa6.88□□□□□ -1.31
CHPF2-202ENST00000465601 BAALC-AS2P0C853 105 aa6.86□□□□□ -1.31
CHPF2-202ENST00000465601 UBE2V1Q13404 147 aa6.86□□□□□ -1.31
CHPF2-202ENST00000465601 ATXN8Q156A1 80 aa6.86□□□□□ -1.31
CHPF2-202ENST00000465601 TEN1Q86WV5 123 aa6.85□□□□□ -1.31
CHPF2-202ENST00000465601 ANKRD29Q8N6D5 301 aa6.85□□□□□ -1.31
CHPF2-202ENST00000465601 MUC17Q685J3 4493 aa6.85□□□□□ -1.31
CHPF2-202ENST00000465601 TAX1BP3O14907 124 aa6.84□□□□□ -1.31
CHPF2-202ENST00000465601 Q6Q795 121 aa6.84□□□□□ -1.31
CHPF2-202ENST00000465601 A0A1W2PNM2 257 aa6.83□□□□□ -1.32
CHPF2-202ENST00000465601 C9orf118A6NHY6 69 aa6.83□□□□□ -1.32
CHPF2-202ENST00000465601 ASB16-AS1Q495Z4 193 aa6.83□□□□□ -1.32
CHPF2-202ENST00000465601 C9orf92A6NGG3 77 aa6.82□□□□□ -1.32
CHPF2-202ENST00000465601 LYRM7Q5U5X0 104 aa6.82□□□□□ -1.32
CHPF2-202ENST00000465601 A0A087WSZ3 146 aa6.81□□□□□ -1.32
CHPF2-202ENST00000465601 TRBV20-1A0A075B6N2 111 aa6.8□□□□□ -1.32
CHPF2-202ENST00000465601 RBM3P98179 157 aaKnown RBP6.8□□□□□ -1.32
CHPF2-202ENST00000465601 A0A1W2PPM0 123 aa6.79□□□□□ -1.32
CHPF2-202ENST00000465601 XP32Q5T750 250 aa6.79□□□□□ -1.32
CHPF2-202ENST00000465601 SS18L2Q9UHA2 77 aa6.79□□□□□ -1.32
CHPF2-202ENST00000465601 CCKP06307 115 aa6.78□□□□□ -1.32
CHPF2-202ENST00000465601 MUC2Q02817 5179 aa6.78□□□□□ -1.32
CHPF2-202ENST00000465601 TRBV7-4A0A0J9YYF1 115 aa6.77□□□□□ -1.33
CHPF2-202ENST00000465601 C9JAW5 83 aa6.77□□□□□ -1.33
CHPF2-202ENST00000465601 DSCR8Q96T75 97 aa6.77□□□□□ -1.33
CHPF2-202ENST00000465601 PCP4L1A6NKN8 68 aa6.76□□□□□ -1.33
CHPF2-202ENST00000465601 VPS25Q9BRG1 176 aa6.76□□□□□ -1.33
CHPF2-202ENST00000465601 COL5A1-AS1Q5SY13 56 aa6.75□□□□□ -1.33
CHPF2-202ENST00000465601 JMJD7-PLA2G4BH0Y9G9 81 aa6.73□□□□□ -1.33
CHPF2-202ENST00000465601 SEC61BP60468 96 aaKnown RBP6.73□□□□□ -1.33
CHPF2-202ENST00000465601 Q96NJ1 140 aa6.73□□□□□ -1.33
CHPF2-202ENST00000465601 MTURNQ8N3F0 131 aa6.72□□□□□ -1.33
CHPF2-202ENST00000465601 SPCS1Q9Y6A9 102 aa6.71□□□□□ -1.34
CHPF2-202ENST00000465601 H3BT86 120 aa6.69□□□□□ -1.34
CHPF2-202ENST00000465601 DEFB116Q30KQ4 102 aa6.69□□□□□ -1.34
CHPF2-202ENST00000465601 Q6ZQT0 140 aa6.69□□□□□ -1.34
CHPF2-202ENST00000465601 OBSCN-AS1Q96MR7 158 aa6.69□□□□□ -1.34
CHPF2-202ENST00000465601 C14orf132Q9NPU4 83 aa6.69□□□□□ -1.34
CHPF2-202ENST00000465601 LOC110117498A0A087WWA1 95 aa6.68□□□□□ -1.34
CHPF2-202ENST00000465601 IGKV4-1P06312 121 aa6.68□□□□□ -1.34
CHPF2-202ENST00000465601 SIGMAR1Q99720 223 aa6.68□□□□□ -1.34
CHPF2-202ENST00000465601 KRTAP4-1Q9BYQ7 146 aa6.68□□□□□ -1.34
CHPF2-202ENST00000465601 LINC00472Q9H8W2 130 aa6.68□□□□□ -1.34
CHPF2-202ENST00000465601 PDE6GP18545 87 aa6.67□□□□□ -1.34
CHPF2-202ENST00000465601 PCOTHQ58A44 107 aa6.67□□□□□ -1.34
CHPF2-202ENST00000465601 RPL37P61927 97 aaKnown RBP6.65□□□□□ -1.34
CHPF2-202ENST00000465601 FAT4Q6V0I7 4981 aa6.64□□□□□ -1.35
CHPF2-202ENST00000465601 K7EP34 96 aa6.63□□□□□ -1.35
CHPF2-202ENST00000465601 SMCPP49901 116 aaPredicted RBP6.63□□□□□ -1.35
CHPF2-202ENST00000465601 DSCR10P59022 87 aa6.63□□□□□ -1.35
CHPF2-202ENST00000465601 A0A0U1RQV1 116 aa6.61□□□□□ -1.35
CHPF2-202ENST00000465601 A0A1B0GW54 56 aa6.61□□□□□ -1.35
CHPF2-202ENST00000465601 LINC00313P59037 77 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms