RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 LINC01547P58512 204 aaPredicted RBP10.34□□□□□ -0.75
PTPRU-206ENST00000465525 ORMDL1Q9P0S3 153 aa10.33□□□□□ -0.76
PTPRU-206ENST00000465525 Q8N377 158 aa10.32□□□□□ -0.76
PTPRU-206ENST00000465525 IGLV5-48A0A075B6I7 105 aa10.31□□□□□ -0.76
PTPRU-206ENST00000465525 C3orf22Q8N5N4 141 aa10.31□□□□□ -0.76
PTPRU-206ENST00000465525 ZNF706Q9Y5V0 76 aaPredicted RBP10.31□□□□□ -0.76
PTPRU-206ENST00000465525 BAALC-AS2P0C853 105 aa10.31□□□□□ -0.76
PTPRU-206ENST00000465525 TEX49A0A1B0GTD5 131 aa10.29□□□□□ -0.76
PTPRU-206ENST00000465525 A0A1B0GV72 72 aa10.28□□□□□ -0.76
PTPRU-206ENST00000465525 KRTAP1-4P0C5Y4 121 aa10.28□□□□□ -0.76
PTPRU-206ENST00000465525 PKHD1L1Q86WI1 4243 aa10.27□□□□□ -0.76
PTPRU-206ENST00000465525 ABCA13Q86UQ4 5058 aa10.27□□□□□ -0.77
PTPRU-206ENST00000465525 LINC00483Q53H64 154 aa10.26□□□□□ -0.77
PTPRU-206ENST00000465525 SMIM29Q86T20 159 aa10.26□□□□□ -0.77
PTPRU-206ENST00000465525 SPRR1BP22528 89 aa10.25□□□□□ -0.77
PTPRU-206ENST00000465525 TMEM256-PLSCR3K7ERE1 68 aa10.24□□□□□ -0.77
PTPRU-206ENST00000465525 SIGMAR1Q99720 223 aa10.24□□□□□ -0.77
PTPRU-206ENST00000465525 A0A087X002 238 aa10.23□□□□□ -0.77
PTPRU-206ENST00000465525 IGLV9-49A0A0B4J1Y8 123 aa10.23□□□□□ -0.77
PTPRU-206ENST00000465525 NDUFV3P56181 108 aaKnown RBP10.22□□□□□ -0.77
PTPRU-206ENST00000465525 LAMTOR3Q9UHA4 124 aa10.22□□□□□ -0.77
PTPRU-206ENST00000465525 GHRHP01286 108 aa10.21□□□□□ -0.78
PTPRU-206ENST00000465525 CDIP1Q9H305 208 aa10.2□□□□□ -0.78
PTPRU-206ENST00000465525 FAM240AA0A1B0GVK7 77 aa10.19□□□□□ -0.78
PTPRU-206ENST00000465525 H3BQ85 93 aa10.19□□□□□ -0.78
PTPRU-206ENST00000465525 KRTAP13-2Q52LG2 175 aa10.18□□□□□ -0.78
PTPRU-206ENST00000465525 C9orf153Q5TBE3 101 aa10.18□□□□□ -0.78
PTPRU-206ENST00000465525 PRR26Q8N8Z3 221 aa10.18□□□□□ -0.78
PTPRU-206ENST00000465525 FLG2Q5D862 2391 aaPredicted RBP10.18□□□□□ -0.78
PTPRU-206ENST00000465525 F8WEM9 126 aa10.18□□□□□ -0.78
PTPRU-206ENST00000465525 MOBPQ13875 183 aa10.18□□□□□ -0.78
PTPRU-206ENST00000465525 FAM229BQ4G0N7 80 aa10.18□□□□□ -0.78
PTPRU-206ENST00000465525 A0A0G2JQZ4 141 aa10.17□□□□□ -0.78
PTPRU-206ENST00000465525 ACYP1P07311 99 aa10.17□□□□□ -0.78
PTPRU-206ENST00000465525 CRYGAP11844 174 aa10.17□□□□□ -0.78
PTPRU-206ENST00000465525 OXTP01178 125 aa10.16□□□□□ -0.78
PTPRU-206ENST00000465525 MYCBP2O75592 4640 aa10.15□□□□□ -0.79
PTPRU-206ENST00000465525 PCLOQ9Y6V0 5065 aa10.13□□□□□ -0.79
PTPRU-206ENST00000465525 SCGB1A1P11684 91 aa10.13□□□□□ -0.79
PTPRU-206ENST00000465525 PCP4P48539 62 aa10.13□□□□□ -0.79
PTPRU-206ENST00000465525 LRP1Q07954 4544 aaKnown RBP10.13□□□□□ -0.79
PTPRU-206ENST00000465525 OBSCN-AS1Q96MR7 158 aa10.12□□□□□ -0.79
PTPRU-206ENST00000465525 KRTAP29-1A8MX34 341 aaPredicted RBP10.12□□□□□ -0.79
PTPRU-206ENST00000465525 Q8NBF4 154 aa10.12□□□□□ -0.79
PTPRU-206ENST00000465525 FAT3Q8TDW7 4589 aa10.11□□□□□ -0.79
PTPRU-206ENST00000465525 JMJD7-PLA2G4BH0Y9G9 81 aa10.11□□□□□ -0.79
PTPRU-206ENST00000465525 C14orf132Q9NPU4 83 aa10.11□□□□□ -0.79
PTPRU-206ENST00000465525 RBM3P98179 157 aaKnown RBP10.1□□□□□ -0.79
PTPRU-206ENST00000465525 TYMSOSQ8TAI1 123 aa10.1□□□□□ -0.79
PTPRU-206ENST00000465525 IGLV8-61A0A075B6I0 122 aa10.09□□□□□ -0.79
PTPRU-206ENST00000465525 IGFL1Q6UW32 110 aa10.09□□□□□ -0.79
PTPRU-206ENST00000465525 KRTAP10-8P60410 259 aa10.08□□□□□ -0.8
PTPRU-206ENST00000465525 MT-ATP8P03928 68 aa10.06□□□□□ -0.8
PTPRU-206ENST00000465525 HRCT1Q6UXD1 115 aa10.06□□□□□ -0.8
PTPRU-206ENST00000465525 DSCR8Q96T75 97 aa10.06□□□□□ -0.8
PTPRU-206ENST00000465525 TRBV7-4A0A0J9YYF1 115 aa10.05□□□□□ -0.8
PTPRU-206ENST00000465525 SSBP3-AS1Q7Z2R9 100 aa10.05□□□□□ -0.8
PTPRU-206ENST00000465525 MT1HL1P0DM35 61 aa10.04□□□□□ -0.8
PTPRU-206ENST00000465525 Q6JHZ5 121 aa10.04□□□□□ -0.8
PTPRU-206ENST00000465525 J3QL48 77 aa10.02□□□□□ -0.8
PTPRU-206ENST00000465525 Q6ZQT0 140 aa10.01□□□□□ -0.81
PTPRU-206ENST00000465525 LOC110117498A0A087WWA1 95 aa10□□□□□ -0.81
PTPRU-206ENST00000465525 A0A1W2PNM2 257 aa10□□□□□ -0.81
PTPRU-206ENST00000465525 CCKP06307 115 aa10□□□□□ -0.81
PTPRU-206ENST00000465525 LINC00643Q86TS7 51 aa9.99□□□□□ -0.81
PTPRU-206ENST00000465525 Q6Q795 121 aa9.99□□□□□ -0.81
PTPRU-206ENST00000465525 LINC00304Q8N9R0 145 aa9.99□□□□□ -0.81
PTPRU-206ENST00000465525 TNXBP22105 4242 aa9.98□□□□□ -0.81
PTPRU-206ENST00000465525 PDE6GP18545 87 aa9.97□□□□□ -0.81
PTPRU-206ENST00000465525 C21orf62-AS1Q17RA5 79 aa9.96□□□□□ -0.81
PTPRU-206ENST00000465525 C4orf48Q5BLP8 95 aa9.95□□□□□ -0.82
PTPRU-206ENST00000465525 IMUPQ9GZP8 106 aa9.93□□□□□ -0.82
PTPRU-206ENST00000465525 TRBV7-7A0A0K0K1E9 115 aa9.93□□□□□ -0.82
PTPRU-206ENST00000465525 CD164Q04900 197 aa9.91□□□□□ -0.82
PTPRU-206ENST00000465525 SPAG11AQ6PDA7 123 aa9.91□□□□□ -0.82
PTPRU-206ENST00000465525 DMBT1Q9UGM3 2413 aaPredicted RBP9.91□□□□□ -0.82
PTPRU-206ENST00000465525 A0A087WSZ3 146 aa9.9□□□□□ -0.82
PTPRU-206ENST00000465525 LINC00846Q9NV44 126 aa9.9□□□□□ -0.83
PTPRU-206ENST00000465525 SPINK1P00995 79 aa9.88□□□□□ -0.83
PTPRU-206ENST00000465525 UBL5Q9BZL1 73 aa9.85□□□□□ -0.83
PTPRU-206ENST00000465525 ATP5EP2Q5VTU8 51 aa9.83□□□□□ -0.84
PTPRU-206ENST00000465525 RPS29P62273 56 aaKnown RBP9.81□□□□□ -0.84
PTPRU-206ENST00000465525 LIMD2Q9BT23 127 aa9.81□□□□□ -0.84
PTPRU-206ENST00000465525 RETNLBQ9BQ08 111 aa9.8□□□□□ -0.84
PTPRU-206ENST00000465525 ANAPC13Q9BS18 74 aa9.79□□□□□ -0.84
PTPRU-206ENST00000465525 SS18L2Q9UHA2 77 aa9.79□□□□□ -0.84
PTPRU-206ENST00000465525 DEFB116Q30KQ4 102 aa9.78□□□□□ -0.84
PTPRU-206ENST00000465525 A0A1B0GW54 56 aa9.77□□□□□ -0.84
PTPRU-206ENST00000465525 Q5XG85 94 aa9.77□□□□□ -0.85
PTPRU-206ENST00000465525 IGKV3D-7A0A0C4DH55 119 aa9.76□□□□□ -0.85
PTPRU-206ENST00000465525 NREPQ16612 68 aa9.76□□□□□ -0.85
PTPRU-206ENST00000465525 HERC1Q15751 4861 aa9.76□□□□□ -0.85
PTPRU-206ENST00000465525 Q6ZVQ6 151 aa9.75□□□□□ -0.85
PTPRU-206ENST00000465525 C1orf195Q5TG92 126 aa9.74□□□□□ -0.85
PTPRU-206ENST00000465525 Q96NJ1 140 aa9.74□□□□□ -0.85
PTPRU-206ENST00000465525 FAM236AA0A1B0GUQ0 79 aa9.73□□□□□ -0.85
PTPRU-206ENST00000465525 FAM236BA0A1B0GV22 79 aa9.73□□□□□ -0.85
PTPRU-206ENST00000465525 ASB16-AS1Q495Z4 193 aa9.72□□□□□ -0.85
PTPRU-206ENST00000465525 LINC00472Q9H8W2 130 aa9.72□□□□□ -0.85
PTPRU-206ENST00000465525 CXCL6P80162 114 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms