RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 BCE1O60756 84 aa11.74□□□□□ -0.53
TSPAN4-210ENST00000464987 Q8NBF4 154 aa11.74□□□□□ -0.53
TSPAN4-210ENST00000464987 HIGD2AQ9BW72 106 aa11.72□□□□□ -0.53
TSPAN4-210ENST00000464987 H7BZZ5 65 aa11.72□□□□□ -0.53
TSPAN4-210ENST00000464987 NBDYA0A0U1RRE5 68 aa11.71□□□□□ -0.53
TSPAN4-210ENST00000464987 LINC00476Q8WZB0 136 aa11.71□□□□□ -0.54
TSPAN4-210ENST00000464987 VPS13DQ5THJ4 4388 aa11.7□□□□□ -0.54
TSPAN4-210ENST00000464987 C14orf177Q52M58 125 aa11.7□□□□□ -0.54
TSPAN4-210ENST00000464987 KMT2AQ03164 3969 aa11.7□□□□□ -0.54
TSPAN4-210ENST00000464987 SPRR4Q96PI1 79 aa11.7□□□□□ -0.54
TSPAN4-210ENST00000464987 PANO1I0J062 215 aa11.69□□□□□ -0.54
TSPAN4-210ENST00000464987 Q6ZRN7 208 aaPredicted RBP11.69□□□□□ -0.54
TSPAN4-210ENST00000464987 C9orf163Q8N9P6 203 aa11.69□□□□□ -0.54
TSPAN4-210ENST00000464987 SMIM26A0A096LP01 95 aa11.68□□□□□ -0.54
TSPAN4-210ENST00000464987 SNURFQ9Y675 71 aa11.68□□□□□ -0.54
TSPAN4-210ENST00000464987 NUPR2A6NF83 97 aa11.66□□□□□ -0.54
TSPAN4-210ENST00000464987 KLKP1Q107X0 134 aa11.66□□□□□ -0.54
TSPAN4-210ENST00000464987 IGFL1Q6UW32 110 aa11.66□□□□□ -0.54
TSPAN4-210ENST00000464987 FP248Q71RG6 208 aaPredicted RBP11.64□□□□□ -0.55
TSPAN4-210ENST00000464987 A0A1B0GW54 56 aa11.64□□□□□ -0.55
TSPAN4-210ENST00000464987 HECTD4Q9Y4D8 3996 aa11.63□□□□□ -0.55
TSPAN4-210ENST00000464987 F8WEM9 126 aa11.63□□□□□ -0.55
TSPAN4-210ENST00000464987 DSCR10P59022 87 aa11.61□□□□□ -0.55
TSPAN4-210ENST00000464987 DNAH2Q9P225 4427 aa11.6□□□□□ -0.55
TSPAN4-210ENST00000464987 OCR1Q9BZK8 76 aa11.59□□□□□ -0.55
TSPAN4-210ENST00000464987 PKIGQ9Y2B9 76 aa11.59□□□□□ -0.55
TSPAN4-210ENST00000464987 K7EQZ3 153 aa11.58□□□□□ -0.56
TSPAN4-210ENST00000464987 UBE2AP49459 152 aa11.58□□□□□ -0.56
TSPAN4-210ENST00000464987 DEFB116Q30KQ4 102 aa11.58□□□□□ -0.56
TSPAN4-210ENST00000464987 FRAS1Q86XX4 4008 aa11.56□□□□□ -0.56
TSPAN4-210ENST00000464987 IGLV8-61A0A075B6I0 122 aa11.56□□□□□ -0.56
TSPAN4-210ENST00000464987 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.56□□□□□ -0.56
TSPAN4-210ENST00000464987 A0A087WSZ3 146 aa11.55□□□□□ -0.56
TSPAN4-210ENST00000464987 NDUFC1O43677 76 aa11.55□□□□□ -0.56
TSPAN4-210ENST00000464987 H0Y9J4 135 aa11.54□□□□□ -0.56
TSPAN4-210ENST00000464987 ATP5EP56381 51 aaPredicted RBP11.54□□□□□ -0.56
TSPAN4-210ENST00000464987 MEGF8Q7Z7M0 2845 aa11.54□□□□□ -0.56
TSPAN4-210ENST00000464987 TMEM254Q8TBM7 123 aa11.53□□□□□ -0.56
TSPAN4-210ENST00000464987 FAM30AQ9NZY2 134 aa11.52□□□□□ -0.56
TSPAN4-210ENST00000464987 LINC00474Q9P2X8 69 aa11.51□□□□□ -0.57
TSPAN4-210ENST00000464987 SPRR1BP22528 89 aa11.51□□□□□ -0.57
TSPAN4-210ENST00000464987 A0A087WTM6 91 aa11.5□□□□□ -0.57
TSPAN4-210ENST00000464987 SPACA4Q8TDM5 124 aa11.5□□□□□ -0.57
TSPAN4-210ENST00000464987 DNAH17Q9UFH2 4485 aa11.49□□□□□ -0.57
TSPAN4-210ENST00000464987 KRTAP13-1Q8IUC0 172 aa11.49□□□□□ -0.57
TSPAN4-210ENST00000464987 V9GYY9 64 aa11.49□□□□□ -0.57
TSPAN4-210ENST00000464987 C1orf195Q5TG92 126 aa11.48□□□□□ -0.57
TSPAN4-210ENST00000464987 DNAH8Q96JB1 4490 aa11.48□□□□□ -0.57
TSPAN4-210ENST00000464987 SEC61GP60059 68 aa11.47□□□□□ -0.57
TSPAN4-210ENST00000464987 RPL37AP61513 92 aaKnown RBP11.46□□□□□ -0.57
TSPAN4-210ENST00000464987 BRK1Q8WUW1 75 aa11.46□□□□□ -0.57
TSPAN4-210ENST00000464987 TGP01266 2768 aa11.46□□□□□ -0.58
TSPAN4-210ENST00000464987 A0A0U1RQV1 116 aa11.45□□□□□ -0.58
TSPAN4-210ENST00000464987 RTL8CO15255 209 aa11.42□□□□□ -0.58
TSPAN4-210ENST00000464987 HCG22E2RYF7 251 aa11.41□□□□□ -0.58
TSPAN4-210ENST00000464987 Q6ZR54 194 aa11.41□□□□□ -0.58
TSPAN4-210ENST00000464987 WFDC13Q8IUB5 93 aa11.39□□□□□ -0.59
TSPAN4-210ENST00000464987 DNAH6Q9C0G6 4158 aa11.37□□□□□ -0.59
TSPAN4-210ENST00000464987 IGLV9-49A0A0B4J1Y8 123 aa11.36□□□□□ -0.59
TSPAN4-210ENST00000464987 LCE6AA0A183 80 aa11.36□□□□□ -0.59
TSPAN4-210ENST00000464987 LINC00472Q9H8W2 130 aa11.35□□□□□ -0.59
TSPAN4-210ENST00000464987 PSORS1C2Q9UIG4 136 aa11.35□□□□□ -0.59
TSPAN4-210ENST00000464987 FAM229BQ4G0N7 80 aa11.35□□□□□ -0.59
TSPAN4-210ENST00000464987 IGLV5-52A0A0A0MRZ9 124 aa11.31□□□□□ -0.6
TSPAN4-210ENST00000464987 MPLKIPQ8TAP9 179 aa11.31□□□□□ -0.6
TSPAN4-210ENST00000464987 ANAPC11Q9NYG5 84 aa11.31□□□□□ -0.6
TSPAN4-210ENST00000464987 DNAH5Q8TE73 4624 aa11.3□□□□□ -0.6
TSPAN4-210ENST00000464987 PLAC8Q9NZF1 115 aa11.29□□□□□ -0.6
TSPAN4-210ENST00000464987 KRTAP29-1A8MX34 341 aaPredicted RBP11.29□□□□□ -0.6
TSPAN4-210ENST00000464987 PRR15Q8IV56 129 aa11.29□□□□□ -0.6
TSPAN4-210ENST00000464987 DNAH11Q96DT5 4516 aa11.29□□□□□ -0.6
TSPAN4-210ENST00000464987 C1orf134Q5TEV5 83 aa11.28□□□□□ -0.6
TSPAN4-210ENST00000464987 LY6G6CO95867 125 aa11.28□□□□□ -0.6
TSPAN4-210ENST00000464987 LINC00483Q53H64 154 aa11.28□□□□□ -0.6
TSPAN4-210ENST00000464987 ALMS1Q8TCU4 4167 aa11.28□□□□□ -0.6
TSPAN4-210ENST00000464987 A8MWP4 228 aa11.27□□□□□ -0.61
TSPAN4-210ENST00000464987 ZCCHC13Q8WW36 166 aaKnown RBP11.27□□□□□ -0.61
TSPAN4-210ENST00000464987 WWC2-AS2Q96NR7 200 aa11.25□□□□□ -0.61
TSPAN4-210ENST00000464987 CASC2Q6XLA1 102 aa11.24□□□□□ -0.61
TSPAN4-210ENST00000464987 Q96NJ1 140 aa11.24□□□□□ -0.61
TSPAN4-210ENST00000464987 HYDINQ4G0P3 5121 aa11.24□□□□□ -0.61
TSPAN4-210ENST00000464987 ZNF861PO60384 105 aa11.23□□□□□ -0.61
TSPAN4-210ENST00000464987 MOBPQ13875 183 aa11.23□□□□□ -0.61
TSPAN4-210ENST00000464987 PMAIP1Q13794 54 aa11.19□□□□□ -0.62
TSPAN4-210ENST00000464987 ZNF706Q9Y5V0 76 aaPredicted RBP11.19□□□□□ -0.62
TSPAN4-210ENST00000464987 MMP24-AS1A0A0U1RRL7 71 aa11.17□□□□□ -0.62
TSPAN4-210ENST00000464987 KRTAP10-2P60368 255 aa11.17□□□□□ -0.62
TSPAN4-210ENST00000464987 Q1T7F1 81 aa11.15□□□□□ -0.63
TSPAN4-210ENST00000464987 PKD1P98161 4303 aa11.14□□□□□ -0.63
TSPAN4-210ENST00000464987 hDV103S1A0JD37 113 aa11.14□□□□□ -0.63
TSPAN4-210ENST00000464987 LINC00208Q96KT6 92 aa11.13□□□□□ -0.63
TSPAN4-210ENST00000464987 IGLV7-43P04211 117 aa11.13□□□□□ -0.63
TSPAN4-210ENST00000464987 PRR4Q16378 134 aa11.12□□□□□ -0.63
TSPAN4-210ENST00000464987 MP68P56378 58 aa11.12□□□□□ -0.63
TSPAN4-210ENST00000464987 FAT2Q9NYQ8 4349 aa11.12□□□□□ -0.63
TSPAN4-210ENST00000464987 H0Y9P7 68 aa11.11□□□□□ -0.63
TSPAN4-210ENST00000464987 NDUFB1O75438 58 aa11.11□□□□□ -0.63
TSPAN4-210ENST00000464987 CIRBP-AS1Q8TBR5 109 aa11.1□□□□□ -0.63
TSPAN4-210ENST00000464987 TRAV22A0A0B4J277 110 aa11.09□□□□□ -0.63
TSPAN4-210ENST00000464987 LRP1BQ9NZR2 4599 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms