RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
USP48-206ENST00000464577 C11orf45Q8TAV5 145 aa4.61□□□□□ -1.67
USP48-206ENST00000464577 INAFM1C9JVW0 142 aa4.6□□□□□ -1.67
USP48-206ENST00000464577 PSPHP1O15172 72 aa4.6□□□□□ -1.67
USP48-206ENST00000464577 CASC10Q5T4H9 136 aa4.6□□□□□ -1.67
USP48-206ENST00000464577 WFDC13Q8IUB5 93 aa4.6□□□□□ -1.67
USP48-206ENST00000464577 VWFP04275 2813 aa4.6□□□□□ -1.67
USP48-206ENST00000464577 HIVEP1P15822 2718 aa4.6□□□□□ -1.67
USP48-206ENST00000464577 A0A087WSZ3 146 aa4.6□□□□□ -1.67
USP48-206ENST00000464577 SEC61GP60059 68 aa4.6□□□□□ -1.67
USP48-206ENST00000464577 PRR4Q16378 134 aa4.6□□□□□ -1.67
USP48-206ENST00000464577 KRTAP10-11P60412 298 aa4.59□□□□□ -1.67
USP48-206ENST00000464577 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
USP48-206ENST00000464577 LINC00208Q96KT6 92 aa4.59□□□□□ -1.67
USP48-206ENST00000464577 H0Y9P7 68 aa4.58□□□□□ -1.68
USP48-206ENST00000464577 FAM229AH3BQW9 127 aa4.58□□□□□ -1.68
USP48-206ENST00000464577 A8MUN3 132 aa4.58□□□□□ -1.68
USP48-206ENST00000464577 Q5VV11 94 aa4.58□□□□□ -1.68
USP48-206ENST00000464577 CASC2Q6XLA1 102 aa4.58□□□□□ -1.68
USP48-206ENST00000464577 KRTAP4-5Q9BYR2 181 aa4.58□□□□□ -1.68
USP48-206ENST00000464577 A0A0G2JQZ4 141 aa4.57□□□□□ -1.68
USP48-206ENST00000464577 A0A1W2PNN7 141 aa4.57□□□□□ -1.68
USP48-206ENST00000464577 SPRR1BP22528 89 aa4.57□□□□□ -1.68
USP48-206ENST00000464577 DEFB116Q30KQ4 102 aa4.57□□□□□ -1.68
USP48-206ENST00000464577 LIMD2Q9BT23 127 aa4.57□□□□□ -1.68
USP48-206ENST00000464577 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
USP48-206ENST00000464577 A8MWP4 228 aa4.57□□□□□ -1.68
USP48-206ENST00000464577 J3QKU1 62 aa4.57□□□□□ -1.68
USP48-206ENST00000464577 UBE2AP49459 152 aa4.57□□□□□ -1.68
USP48-206ENST00000464577 CNBPP62633 177 aaKnown RBP4.57□□□□□ -1.68
USP48-206ENST00000464577 C9orf163Q8N9P6 203 aa4.57□□□□□ -1.68
USP48-206ENST00000464577 PRLHP81277 87 aa4.56□□□□□ -1.68
USP48-206ENST00000464577 Q8N9P0 234 aaPredicted RBP4.56□□□□□ -1.68
USP48-206ENST00000464577 C16orf90A8MZG2 172 aa4.55□□□□□ -1.68
USP48-206ENST00000464577 RPL37AP61513 92 aaKnown RBP4.55□□□□□ -1.68
USP48-206ENST00000464577 LINC00472Q9H8W2 130 aa4.55□□□□□ -1.68
USP48-206ENST00000464577 H0Y9J4 135 aa4.55□□□□□ -1.68
USP48-206ENST00000464577 NOTCH2Q04721 2471 aa4.54□□□□□ -1.68
USP48-206ENST00000464577 A0A096LNI7 61 aa4.54□□□□□ -1.68
USP48-206ENST00000464577 TENM4Q6N022 2769 aa4.54□□□□□ -1.68
USP48-206ENST00000464577 UNC79Q9P2D8 2635 aa4.54□□□□□ -1.68
USP48-206ENST00000464577 DNAH1Q9P2D7 4330 aa4.54□□□□□ -1.68
USP48-206ENST00000464577 IGLV7-46A0A075B6I9 117 aa4.52□□□□□ -1.69
USP48-206ENST00000464577 MMP24-AS1A0A0U1RRL7 71 aa4.52□□□□□ -1.69
USP48-206ENST00000464577 Q75L30 129 aa4.52□□□□□ -1.69
USP48-206ENST00000464577 LOC101927531A0A1B0GV80 90 aa4.52□□□□□ -1.69
USP48-206ENST00000464577 CHKB-CPT1BH3BT56 60 aa4.52□□□□□ -1.69
USP48-206ENST00000464577 PRB2P02812 416 aaPredicted RBP4.52□□□□□ -1.69
USP48-206ENST00000464577 PRR15LQ9BU68 103 aa4.52□□□□□ -1.69
USP48-206ENST00000464577 KRTAP9-8Q9BYQ0 159 aa4.52□□□□□ -1.69
USP48-206ENST00000464577 TENM1Q9UKZ4 2725 aa4.51□□□□□ -1.69
USP48-206ENST00000464577 ITPR2Q14571 2701 aa4.51□□□□□ -1.69
USP48-206ENST00000464577 IGKV2-24A0A0C4DH68 120 aa4.5□□□□□ -1.69
USP48-206ENST00000464577 COA5Q86WW8 74 aa4.5□□□□□ -1.69
USP48-206ENST00000464577 ASB16-AS1Q495Z4 193 aa4.5□□□□□ -1.69
USP48-206ENST00000464577 TP53AIP1Q9HCN2 124 aa4.5□□□□□ -1.69
USP48-206ENST00000464577 A8MU10 97 aa4.49□□□□□ -1.69
USP48-206ENST00000464577 CD164Q04900 197 aa4.49□□□□□ -1.69
USP48-206ENST00000464577 MOBPQ13875 183 aa4.49□□□□□ -1.69
USP48-206ENST00000464577 C14orf177Q52M58 125 aa4.48□□□□□ -1.69
USP48-206ENST00000464577 ATP11AUNQ6ZP68 121 aa4.48□□□□□ -1.69
USP48-206ENST00000464577 PHF5AQ7RTV0 110 aaKnown RBP4.48□□□□□ -1.69
USP48-206ENST00000464577 KRTAP11-1Q8IUC1 163 aa4.48□□□□□ -1.69
USP48-206ENST00000464577 TEP1Q99973 2627 aaKnown RBP4.48□□□□□ -1.69
USP48-206ENST00000464577 NSD1Q96L73 2696 aaPredicted RBP4.48□□□□□ -1.69
USP48-206ENST00000464577 Q6ZR54 194 aa4.47□□□□□ -1.69
USP48-206ENST00000464577 FASNP49327 2511 aaKnown RBP4.47□□□□□ -1.69
USP48-206ENST00000464577 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
USP48-206ENST00000464577 PLAC8Q9NZF1 115 aa4.47□□□□□ -1.69
USP48-206ENST00000464577 LINC01558Q9Y6Z2 57 aa4.47□□□□□ -1.69
USP48-206ENST00000464577 LCA10Q71F78 164 aa4.46□□□□□ -1.7
USP48-206ENST00000464577 KRTAP13-1Q8IUC0 172 aa4.46□□□□□ -1.7
USP48-206ENST00000464577 TENM3Q9P273 2699 aa4.46□□□□□ -1.7
USP48-206ENST00000464577 PKD1L1Q8TDX9 2849 aa4.46□□□□□ -1.7
USP48-206ENST00000464577 ATRQ13535 2644 aa4.46□□□□□ -1.7
USP48-206ENST00000464577 A6NED7 52 aa4.45□□□□□ -1.7
USP48-206ENST00000464577 Q96NJ1 140 aa4.45□□□□□ -1.7
USP48-206ENST00000464577 KRTAP1-5Q9BYS1 174 aa4.45□□□□□ -1.7
USP48-206ENST00000464577 CDC42SE1Q9NRR8 79 aa4.45□□□□□ -1.7
USP48-206ENST00000464577 C8orf17Q9NRJ1 99 aa4.45□□□□□ -1.7
USP48-206ENST00000464577 KMT2BQ9UMN6 2715 aaPredicted RBP4.44□□□□□ -1.7
USP48-206ENST00000464577 CHTF8P0CG12 524 aa4.44□□□□□ -1.7
USP48-206ENST00000464577 A6NN06 94 aa4.44□□□□□ -1.7
USP48-206ENST00000464577 NDUFS5O43920 106 aa4.44□□□□□ -1.7
USP48-206ENST00000464577 PCOTHQ58A44 107 aa4.44□□□□□ -1.7
USP48-206ENST00000464577 TRRAPQ9Y4A5 3859 aa4.43□□□□□ -1.7
USP48-206ENST00000464577 SPTSSBQ8NFR3 76 aa4.42□□□□□ -1.7
USP48-206ENST00000464577 OTOGQ6ZRI0 2925 aa4.42□□□□□ -1.7
USP48-206ENST00000464577 A0A1B0GVX0 72 aa4.42□□□□□ -1.7
USP48-206ENST00000464577 LINC00483Q53H64 154 aa4.42□□□□□ -1.7
USP48-206ENST00000464577 KRTAP24-1Q3LI83 254 aa4.41□□□□□ -1.7
USP48-206ENST00000464577 HELZ2Q9BYK8 2649 aaKnown RBP4.41□□□□□ -1.7
USP48-206ENST00000464577 DNAH3Q8TD57 4116 aa4.41□□□□□ -1.7
USP48-206ENST00000464577 H3BS24 57 aa4.4□□□□□ -1.71
USP48-206ENST00000464577 HRES1P13985 223 aa4.4□□□□□ -1.71
USP48-206ENST00000464577 SPAG11AQ6PDA7 123 aa4.4□□□□□ -1.71
USP48-206ENST00000464577 MRPL34Q9BQ48 92 aaKnown RBP4.4□□□□□ -1.71
USP48-206ENST00000464577 IGLV9-49A0A0B4J1Y8 123 aa4.39□□□□□ -1.71
USP48-206ENST00000464577 CDK2AP2O75956 126 aa4.39□□□□□ -1.71
USP48-206ENST00000464577 UBE2DNLQ8IWF7 75 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms