RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 Q8NBF4 154 aa9.85□□□□□ -0.83
VPS52-215ENST00000464425 SCGB1C2P0DMR2 95 aa9.84□□□□□ -0.83
VPS52-215ENST00000464425 PPDPFLQ8WWR9 84 aa9.84□□□□□ -0.83
VPS52-215ENST00000464425 CLEC2BQ92478 149 aa9.84□□□□□ -0.83
VPS52-215ENST00000464425 LAMTOR3Q9UHA4 124 aa9.84□□□□□ -0.83
VPS52-215ENST00000464425 MOBPQ13875 183 aa9.83□□□□□ -0.84
VPS52-215ENST00000464425 SSBP3-AS1Q7Z2R9 100 aa9.83□□□□□ -0.84
VPS52-215ENST00000464425 SMIM29Q86T20 159 aa9.83□□□□□ -0.84
VPS52-215ENST00000464425 SNHG12Q9BXW3 62 aa9.83□□□□□ -0.84
VPS52-215ENST00000464425 C4orf48Q5BLP8 95 aa9.82□□□□□ -0.84
VPS52-215ENST00000464425 RETNLBQ9BQ08 111 aa9.82□□□□□ -0.84
VPS52-215ENST00000464425 GHRHP01286 108 aa9.81□□□□□ -0.84
VPS52-215ENST00000464425 SPAG11AQ6PDA7 123 aa9.81□□□□□ -0.84
VPS52-215ENST00000464425 PCP4L1A6NKN8 68 aa9.8□□□□□ -0.84
VPS52-215ENST00000464425 C9orf118A6NHY6 69 aa9.79□□□□□ -0.84
VPS52-215ENST00000464425 TAX1BP3O14907 124 aa9.79□□□□□ -0.84
VPS52-215ENST00000464425 TRACP01848 142 aa9.79□□□□□ -0.84
VPS52-215ENST00000464425 C9orf153Q5TBE3 101 aa9.79□□□□□ -0.84
VPS52-215ENST00000464425 LST1O00453 97 aa9.78□□□□□ -0.84
VPS52-215ENST00000464425 DNAL4O96015 105 aa9.78□□□□□ -0.84
VPS52-215ENST00000464425 NAA38Q9BRA0 125 aaKnown RBP9.78□□□□□ -0.84
VPS52-215ENST00000464425 H3BQ85 93 aa9.77□□□□□ -0.85
VPS52-215ENST00000464425 LYRM7Q5U5X0 104 aa9.77□□□□□ -0.85
VPS52-215ENST00000464425 H3BUT2 72 aa9.76□□□□□ -0.85
VPS52-215ENST00000464425 COL5A1-AS1Q5SY13 56 aa9.76□□□□□ -0.85
VPS52-215ENST00000464425 ATXN8Q156A1 80 aa9.74□□□□□ -0.85
VPS52-215ENST00000464425 ORMDL1Q9P0S3 153 aa9.74□□□□□ -0.85
VPS52-215ENST00000464425 TRBV20-1A0A075B6N2 111 aa9.73□□□□□ -0.85
VPS52-215ENST00000464425 F8WEM9 126 aa9.73□□□□□ -0.85
VPS52-215ENST00000464425 TCL1BO95988 128 aa9.73□□□□□ -0.85
VPS52-215ENST00000464425 SPINK1P00995 79 aa9.73□□□□□ -0.85
VPS52-215ENST00000464425 IGLV8-61A0A075B6I0 122 aa9.72□□□□□ -0.85
VPS52-215ENST00000464425 TMEM256-PLSCR3K7ERE1 68 aa9.72□□□□□ -0.85
VPS52-215ENST00000464425 A0A1W2PPM0 123 aa9.71□□□□□ -0.86
VPS52-215ENST00000464425 FABP2P12104 132 aa9.7□□□□□ -0.86
VPS52-215ENST00000464425 NDUFV3P56181 108 aaKnown RBP9.7□□□□□ -0.86
VPS52-215ENST00000464425 IGLV7-46A0A075B6I9 117 aa9.69□□□□□ -0.86
VPS52-215ENST00000464425 Q6JHZ5 121 aa9.68□□□□□ -0.86
VPS52-215ENST00000464425 RPS29P62273 56 aaKnown RBP9.67□□□□□ -0.86
VPS52-215ENST00000464425 CD164Q04900 197 aa9.67□□□□□ -0.86
VPS52-215ENST00000464425 UBE2V1Q13404 147 aa9.67□□□□□ -0.86
VPS52-215ENST00000464425 HRCT1Q6UXD1 115 aa9.66□□□□□ -0.86
VPS52-215ENST00000464425 BAALC-AS2P0C853 105 aa9.65□□□□□ -0.86
VPS52-215ENST00000464425 RNF213Q63HN8 5207 aa9.64□□□□□ -0.87
VPS52-215ENST00000464425 H3BMG7 143 aa9.63□□□□□ -0.87
VPS52-215ENST00000464425 IGFL1Q6UW32 110 aa9.62□□□□□ -0.87
VPS52-215ENST00000464425 FP248Q71RG6 208 aaPredicted RBP9.62□□□□□ -0.87
VPS52-215ENST00000464425 A0A0G2JQZ4 141 aa9.6□□□□□ -0.87
VPS52-215ENST00000464425 TPRXLQ17RH7 258 aa9.6□□□□□ -0.87
VPS52-215ENST00000464425 ANKRD29Q8N6D5 301 aa9.6□□□□□ -0.87
VPS52-215ENST00000464425 SPCS1Q9Y6A9 102 aa9.6□□□□□ -0.87
VPS52-215ENST00000464425 C9JAW5 83 aa9.59□□□□□ -0.87
VPS52-215ENST00000464425 CDIP1Q9H305 208 aa9.59□□□□□ -0.87
VPS52-215ENST00000464425 Q5XG85 94 aa9.57□□□□□ -0.88
VPS52-215ENST00000464425 LIMD2Q9BT23 127 aa9.57□□□□□ -0.88
VPS52-215ENST00000464425 Q6Q795 121 aa9.56□□□□□ -0.88
VPS52-215ENST00000464425 H3BT86 120 aa9.54□□□□□ -0.88
VPS52-215ENST00000464425 RBM3P98179 157 aaKnown RBP9.54□□□□□ -0.88
VPS52-215ENST00000464425 TEN1Q86WV5 123 aa9.54□□□□□ -0.88
VPS52-215ENST00000464425 TRBV7-7A0A0K0K1E9 115 aa9.53□□□□□ -0.88
VPS52-215ENST00000464425 JMJD7-PLA2G4BH0Y9G9 81 aa9.53□□□□□ -0.88
VPS52-215ENST00000464425 K7EP34 96 aa9.53□□□□□ -0.88
VPS52-215ENST00000464425 KRTAP13-3Q3SY46 172 aa9.53□□□□□ -0.88
VPS52-215ENST00000464425 TRBV7-4A0A0J9YYF1 115 aa9.51□□□□□ -0.89
VPS52-215ENST00000464425 DSCR8Q96T75 97 aa9.51□□□□□ -0.89
VPS52-215ENST00000464425 A0A1B0GV72 72 aa9.5□□□□□ -0.89
VPS52-215ENST00000464425 GTF2H5Q6ZYL4 71 aa9.5□□□□□ -0.89
VPS52-215ENST00000464425 OBSCN-AS1Q96MR7 158 aa9.49□□□□□ -0.89
VPS52-215ENST00000464425 A0A1W2PNM2 257 aa9.48□□□□□ -0.89
VPS52-215ENST00000464425 ASB16-AS1Q495Z4 193 aa9.47□□□□□ -0.89
VPS52-215ENST00000464425 MTURNQ8N3F0 131 aa9.47□□□□□ -0.89
VPS52-215ENST00000464425 CCKP06307 115 aa9.46□□□□□ -0.9
VPS52-215ENST00000464425 LOC110117498A0A087WWA1 95 aa9.45□□□□□ -0.9
VPS52-215ENST00000464425 PDE6GP18545 87 aa9.45□□□□□ -0.9
VPS52-215ENST00000464425 PRO0461Q9UI25 63 aa9.45□□□□□ -0.9
VPS52-215ENST00000464425 MUC2Q02817 5179 aa9.45□□□□□ -0.9
VPS52-215ENST00000464425 SS18L2Q9UHA2 77 aa9.44□□□□□ -0.9
VPS52-215ENST00000464425 MUC17Q685J3 4493 aa9.44□□□□□ -0.9
VPS52-215ENST00000464425 SMCPP49901 116 aaPredicted RBP9.43□□□□□ -0.9
VPS52-215ENST00000464425 C1orf195Q5TG92 126 aa9.43□□□□□ -0.9
VPS52-215ENST00000464425 Q6ZQT0 140 aa9.42□□□□□ -0.9
VPS52-215ENST00000464425 A0A087WSZ3 146 aa9.41□□□□□ -0.9
VPS52-215ENST00000464425 F8W1H4 67 aa9.41□□□□□ -0.9
VPS52-215ENST00000464425 C21orf62-AS1Q17RA5 79 aa9.41□□□□□ -0.9
VPS52-215ENST00000464425 A0A1B0GW54 56 aa9.4□□□□□ -0.9
VPS52-215ENST00000464425 C14orf132Q9NPU4 83 aa9.4□□□□□ -0.9
VPS52-215ENST00000464425 C9orf92A6NGG3 77 aa9.38□□□□□ -0.91
VPS52-215ENST00000464425 VPS25Q9BRG1 176 aa9.38□□□□□ -0.91
VPS52-215ENST00000464425 XP32Q5T750 250 aa9.36□□□□□ -0.91
VPS52-215ENST00000464425 SEC61BP60468 96 aaKnown RBP9.31□□□□□ -0.92
VPS52-215ENST00000464425 Q96NJ1 140 aa9.31□□□□□ -0.92
VPS52-215ENST00000464425 A0A1B0GV90 55 aa9.3□□□□□ -0.92
VPS52-215ENST00000464425 LINC00472Q9H8W2 130 aa9.29□□□□□ -0.92
VPS52-215ENST00000464425 ETDBQ3ZM63 59 aa9.27□□□□□ -0.93
VPS52-215ENST00000464425 A0A0U1RQV1 116 aa9.26□□□□□ -0.93
VPS52-215ENST00000464425 KRTAP4-1Q9BYQ7 146 aa9.23□□□□□ -0.93
VPS52-215ENST00000464425 IGKV4-1P06312 121 aa9.22□□□□□ -0.93
VPS52-215ENST00000464425 J3KT08 172 aa9.21□□□□□ -0.94
VPS52-215ENST00000464425 NREPQ16612 68 aa9.21□□□□□ -0.94
VPS52-215ENST00000464425 PCOTHQ58A44 107 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms