RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 FAM236DA0A1B0GTK5 79 aa7.29□□□□□ -1.24
SMC1A-204ENST00000463684 FAM236CP0DP71 79 aa7.29□□□□□ -1.24
SMC1A-204ENST00000463684 COPS9Q8WXC6 57 aa7.29□□□□□ -1.24
SMC1A-204ENST00000463684 CLEC2BQ92478 149 aa7.29□□□□□ -1.24
SMC1A-204ENST00000463684 IGFL1Q6UW32 110 aa7.28□□□□□ -1.24
SMC1A-204ENST00000463684 SLC7A5P1Q8MH63 180 aa7.28□□□□□ -1.24
SMC1A-204ENST00000463684 C20orf166-AS1Q96NR2 134 aa7.28□□□□□ -1.24
SMC1A-204ENST00000463684 LST1O00453 97 aa7.27□□□□□ -1.25
SMC1A-204ENST00000463684 TRAV13-2A0A0B4J235 113 aa7.26□□□□□ -1.25
SMC1A-204ENST00000463684 TTTY13Q9BZ97 58 aa7.26□□□□□ -1.25
SMC1A-204ENST00000463684 A8MUU9 505 aa7.25□□□□□ -1.25
SMC1A-204ENST00000463684 IFITM1P13164 125 aa7.25□□□□□ -1.25
SMC1A-204ENST00000463684 SCGB1D4Q6XE38 83 aa7.25□□□□□ -1.25
SMC1A-204ENST00000463684 SYS1-DBNDD2H3BUS1 97 aa7.24□□□□□ -1.25
SMC1A-204ENST00000463684 VAMP3Q15836 100 aa7.24□□□□□ -1.25
SMC1A-204ENST00000463684 OCIAD2Q56VL3 154 aa7.24□□□□□ -1.25
SMC1A-204ENST00000463684 SMIM11BQ8TCY0 68 aa7.24□□□□□ -1.25
SMC1A-204ENST00000463684 Q6ZQY7 126 aa7.21□□□□□ -1.26
SMC1A-204ENST00000463684 Q6ZVH6 145 aa7.21□□□□□ -1.26
SMC1A-204ENST00000463684 MUSTN1Q8IVN3 82 aa7.21□□□□□ -1.26
SMC1A-204ENST00000463684 RBM12B-AS1Q9P1G2 102 aa7.21□□□□□ -1.26
SMC1A-204ENST00000463684 hADV29S1A0JD25 119 aa7.2□□□□□ -1.26
SMC1A-204ENST00000463684 LINC01545Q5VT33 79 aa7.2□□□□□ -1.26
SMC1A-204ENST00000463684 LINC00575Q6W349 94 aa7.2□□□□□ -1.26
SMC1A-204ENST00000463684 KRTAP19-6Q3LI70 58 aa7.19□□□□□ -1.26
SMC1A-204ENST00000463684 PET117Q6UWS5 81 aa7.18□□□□□ -1.26
SMC1A-204ENST00000463684 SS18L2Q9UHA2 77 aa7.18□□□□□ -1.26
SMC1A-204ENST00000463684 SNHG12Q9BXW3 62 aa7.16□□□□□ -1.26
SMC1A-204ENST00000463684 SCGB1D1O95968 90 aa7.15□□□□□ -1.26
SMC1A-204ENST00000463684 KRTAP6-3Q3LI67 103 aa7.15□□□□□ -1.26
SMC1A-204ENST00000463684 H3BUT2 72 aa7.13□□□□□ -1.27
SMC1A-204ENST00000463684 DSCR10P59022 87 aa7.13□□□□□ -1.27
SMC1A-204ENST00000463684 PPDPFLQ8WWR9 84 aa7.13□□□□□ -1.27
SMC1A-204ENST00000463684 KRTAP16-1A8MUX0 517 aa7.12□□□□□ -1.27
SMC1A-204ENST00000463684 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-204ENST00000463684 MPLKIPQ8TAP9 179 aa7.12□□□□□ -1.27
SMC1A-204ENST00000463684 HRES1P13985 223 aa7.11□□□□□ -1.27
SMC1A-204ENST00000463684 ANKRD39Q53RE8 183 aa7.11□□□□□ -1.27
SMC1A-204ENST00000463684 TEN1Q86WV5 123 aa7.09□□□□□ -1.27
SMC1A-204ENST00000463684 C3orf79P0CE67 100 aa7.08□□□□□ -1.28
SMC1A-204ENST00000463684 MTURNQ8N3F0 131 aa7.08□□□□□ -1.28
SMC1A-204ENST00000463684 LINC00313P59037 77 aa7.07□□□□□ -1.28
SMC1A-204ENST00000463684 A0A087WSZ3 146 aa7.06□□□□□ -1.28
SMC1A-204ENST00000463684 COLCA2A8K830 154 aa7.06□□□□□ -1.28
SMC1A-204ENST00000463684 KRTDAPP60985 99 aa7.06□□□□□ -1.28
SMC1A-204ENST00000463684 NOTCH2NLQ7Z3S9 236 aa7.05□□□□□ -1.28
SMC1A-204ENST00000463684 SIGMAR1Q99720 223 aa7.05□□□□□ -1.28
SMC1A-204ENST00000463684 BVES-AS1Q5T3Y7 98 aa7.04□□□□□ -1.28
SMC1A-204ENST00000463684 HIST1H2BKO60814 126 aa7.03□□□□□ -1.28
SMC1A-204ENST00000463684 HIST1H2BJP06899 126 aa7.03□□□□□ -1.28
SMC1A-204ENST00000463684 HIST1H2BOP23527 126 aa7.03□□□□□ -1.28
SMC1A-204ENST00000463684 HIST1H2BBP33778 126 aa7.03□□□□□ -1.28
SMC1A-204ENST00000463684 HIST1H2BDP58876 126 aa7.03□□□□□ -1.28
SMC1A-204ENST00000463684 HIST1H2BCP62807 126 aa7.03□□□□□ -1.28
SMC1A-204ENST00000463684 HIST2H2BEQ16778 126 aa7.03□□□□□ -1.28
SMC1A-204ENST00000463684 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-204ENST00000463684 HIST1H2BHQ93079 126 aa7.03□□□□□ -1.28
SMC1A-204ENST00000463684 C12orf57Q99622 126 aa7.03□□□□□ -1.28
SMC1A-204ENST00000463684 HIST1H2BNQ99877 126 aa7.03□□□□□ -1.28
SMC1A-204ENST00000463684 HIST1H2BMQ99879 126 aa7.03□□□□□ -1.28
SMC1A-204ENST00000463684 ATOH7Q8N100 152 aa7.01□□□□□ -1.29
SMC1A-204ENST00000463684 A8MWP4 228 aa6.99□□□□□ -1.29
SMC1A-204ENST00000463684 SNCGO76070 127 aa6.99□□□□□ -1.29
SMC1A-204ENST00000463684 NDUFV3P56181 108 aaKnown RBP6.99□□□□□ -1.29
SMC1A-204ENST00000463684 IGKV4-1P06312 121 aa6.98□□□□□ -1.29
SMC1A-204ENST00000463684 H3BMG7 143 aa6.95□□□□□ -1.3
SMC1A-204ENST00000463684 Q8N9P0 234 aaPredicted RBP6.95□□□□□ -1.3
SMC1A-204ENST00000463684 SNRPEP62304 92 aaKnown RBP6.94□□□□□ -1.3
SMC1A-204ENST00000463684 IGHV6-1A0A0B4J1U7 121 aa6.91□□□□□ -1.3
SMC1A-204ENST00000463684 GHRHP01286 108 aa6.91□□□□□ -1.3
SMC1A-204ENST00000463684 NEBP20929 6669 aa6.91□□□□□ -1.3
SMC1A-204ENST00000463684 A0A1W2PNM2 257 aa6.9□□□□□ -1.3
SMC1A-204ENST00000463684 H0YGX0 51 aa6.89□□□□□ -1.31
SMC1A-204ENST00000463684 FABP2P12104 132 aa6.89□□□□□ -1.31
SMC1A-204ENST00000463684 SPINK7P58062 85 aa6.89□□□□□ -1.31
SMC1A-204ENST00000463684 DEFB116Q30KQ4 102 aa6.88□□□□□ -1.31
SMC1A-204ENST00000463684 COA6Q5JTJ3 125 aaKnown RBP6.88□□□□□ -1.31
SMC1A-204ENST00000463684 HIST1H4GQ99525 98 aa6.87□□□□□ -1.31
SMC1A-204ENST00000463684 TRBV7-4A0A0J9YYF1 115 aa6.86□□□□□ -1.31
SMC1A-204ENST00000463684 HSBP1L1C9JCN9 74 aa6.86□□□□□ -1.31
SMC1A-204ENST00000463684 ZCCHC13Q8WW36 166 aaKnown RBP6.86□□□□□ -1.31
SMC1A-204ENST00000463684 KRTAP20-1Q3LI63 56 aa6.85□□□□□ -1.31
SMC1A-204ENST00000463684 FAM218AQ96MZ4 157 aa6.85□□□□□ -1.31
SMC1A-204ENST00000463684 ANKRD29Q8N6D5 301 aa6.84□□□□□ -1.31
SMC1A-204ENST00000463684 LINC00472Q9H8W2 130 aa6.84□□□□□ -1.31
SMC1A-204ENST00000463684 C8orf87E5RJ46 101 aa6.83□□□□□ -1.32
SMC1A-204ENST00000463684 RAB37Q96AX2 223 aa6.82□□□□□ -1.32
SMC1A-204ENST00000463684 A0A1B0GX51 115 aa6.81□□□□□ -1.32
SMC1A-204ENST00000463684 WFDC13Q8IUB5 93 aa6.81□□□□□ -1.32
SMC1A-204ENST00000463684 MUC12Q9UKN1 5478 aa6.79□□□□□ -1.32
SMC1A-204ENST00000463684 A0A1B0GVX0 72 aa6.79□□□□□ -1.32
SMC1A-204ENST00000463684 TRACP01848 142 aa6.78□□□□□ -1.32
SMC1A-204ENST00000463684 A0A1B0GV72 72 aa6.77□□□□□ -1.33
SMC1A-204ENST00000463684 CCKP06307 115 aa6.76□□□□□ -1.33
SMC1A-204ENST00000463684 LYRM7Q5U5X0 104 aa6.75□□□□□ -1.33
SMC1A-204ENST00000463684 A6NN06 94 aa6.74□□□□□ -1.33
SMC1A-204ENST00000463684 A0A0B4J2C4 111 aa6.73□□□□□ -1.33
SMC1A-204ENST00000463684 H3BQ85 93 aa6.72□□□□□ -1.33
SMC1A-204ENST00000463684 DNAL4O96015 105 aa6.71□□□□□ -1.34
SMC1A-204ENST00000463684 ORMDL1Q9P0S3 153 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms