RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 MT1HL1P0DM35 61 aa8.2□□□□□ -1.1
PHACTR4-203ENST00000463428 CRYGAP11844 174 aa8.2□□□□□ -1.1
PHACTR4-203ENST00000463428 LYRM7Q5U5X0 104 aa8.2□□□□□ -1.1
PHACTR4-203ENST00000463428 PCLOQ9Y6V0 5065 aa8.19□□□□□ -1.1
PHACTR4-203ENST00000463428 TRBV20-1A0A075B6N2 111 aa8.19□□□□□ -1.1
PHACTR4-203ENST00000463428 ATXN8Q156A1 80 aa8.19□□□□□ -1.1
PHACTR4-203ENST00000463428 OCIAD2Q56VL3 154 aa8.19□□□□□ -1.1
PHACTR4-203ENST00000463428 FABP2P12104 132 aa8.18□□□□□ -1.1
PHACTR4-203ENST00000463428 C3orf22Q8N5N4 141 aa8.18□□□□□ -1.1
PHACTR4-203ENST00000463428 PPDPFLQ8WWR9 84 aa8.18□□□□□ -1.1
PHACTR4-203ENST00000463428 DNAL4O96015 105 aa8.17□□□□□ -1.1
PHACTR4-203ENST00000463428 TNXBP22105 4242 aa8.17□□□□□ -1.1
PHACTR4-203ENST00000463428 ORMDL1Q9P0S3 153 aa8.15□□□□□ -1.1
PHACTR4-203ENST00000463428 LAMTOR3Q9UHA4 124 aa8.15□□□□□ -1.1
PHACTR4-203ENST00000463428 IGLV9-49A0A0B4J1Y8 123 aa8.13□□□□□ -1.11
PHACTR4-203ENST00000463428 TYMSOSQ8TAI1 123 aa8.13□□□□□ -1.11
PHACTR4-203ENST00000463428 SPCS1Q9Y6A9 102 aa8.13□□□□□ -1.11
PHACTR4-203ENST00000463428 H3BQ85 93 aa8.12□□□□□ -1.11
PHACTR4-203ENST00000463428 GHRHP01286 108 aa8.12□□□□□ -1.11
PHACTR4-203ENST00000463428 H3BMG7 143 aa8.12□□□□□ -1.11
PHACTR4-203ENST00000463428 TMEM256-PLSCR3K7ERE1 68 aa8.12□□□□□ -1.11
PHACTR4-203ENST00000463428 BAALC-AS2P0C853 105 aa8.12□□□□□ -1.11
PHACTR4-203ENST00000463428 MOBPQ13875 183 aa8.12□□□□□ -1.11
PHACTR4-203ENST00000463428 SSBP3-AS1Q7Z2R9 100 aa8.12□□□□□ -1.11
PHACTR4-203ENST00000463428 NDUFV3P56181 108 aaKnown RBP8.11□□□□□ -1.11
PHACTR4-203ENST00000463428 IGLV8-61A0A075B6I0 122 aa8.1□□□□□ -1.11
PHACTR4-203ENST00000463428 K7EP34 96 aa8.1□□□□□ -1.11
PHACTR4-203ENST00000463428 Q8NBF4 154 aa8.1□□□□□ -1.11
PHACTR4-203ENST00000463428 DMBT1Q9UGM3 2413 aaPredicted RBP8.09□□□□□ -1.11
PHACTR4-203ENST00000463428 C9JAW5 83 aa8.09□□□□□ -1.11
PHACTR4-203ENST00000463428 UBE2V1Q13404 147 aa8.09□□□□□ -1.11
PHACTR4-203ENST00000463428 C9orf153Q5TBE3 101 aa8.09□□□□□ -1.11
PHACTR4-203ENST00000463428 F8WEM9 126 aa8.06□□□□□ -1.12
PHACTR4-203ENST00000463428 J3QL48 77 aa8.06□□□□□ -1.12
PHACTR4-203ENST00000463428 MTURNQ8N3F0 131 aa8.05□□□□□ -1.12
PHACTR4-203ENST00000463428 A0A0G2JQZ4 141 aa8.04□□□□□ -1.12
PHACTR4-203ENST00000463428 H3BT86 120 aa8.04□□□□□ -1.12
PHACTR4-203ENST00000463428 ANKRD29Q8N6D5 301 aa8.04□□□□□ -1.12
PHACTR4-203ENST00000463428 LINC00304Q8N9R0 145 aa8.04□□□□□ -1.12
PHACTR4-203ENST00000463428 PRO0461Q9UI25 63 aa8.04□□□□□ -1.12
PHACTR4-203ENST00000463428 SMCPP49901 116 aaPredicted RBP8.03□□□□□ -1.12
PHACTR4-203ENST00000463428 IGFL1Q6UW32 110 aa8.03□□□□□ -1.12
PHACTR4-203ENST00000463428 GTF2H5Q6ZYL4 71 aa8.03□□□□□ -1.12
PHACTR4-203ENST00000463428 Q6JHZ5 121 aa8.03□□□□□ -1.12
PHACTR4-203ENST00000463428 A0A1B0GV90 55 aa8.01□□□□□ -1.13
PHACTR4-203ENST00000463428 SPAG11AQ6PDA7 123 aa8.01□□□□□ -1.13
PHACTR4-203ENST00000463428 A0A1B0GV72 72 aa7.99□□□□□ -1.13
PHACTR4-203ENST00000463428 CD164Q04900 197 aa7.99□□□□□ -1.13
PHACTR4-203ENST00000463428 OBSCN-AS1Q96MR7 158 aa7.99□□□□□ -1.13
PHACTR4-203ENST00000463428 TRBV7-4A0A0J9YYF1 115 aa7.98□□□□□ -1.13
PHACTR4-203ENST00000463428 SPINK1P00995 79 aa7.98□□□□□ -1.13
PHACTR4-203ENST00000463428 RBM3P98179 157 aaKnown RBP7.98□□□□□ -1.13
PHACTR4-203ENST00000463428 JMJD7-PLA2G4BH0Y9G9 81 aa7.97□□□□□ -1.13
PHACTR4-203ENST00000463428 C4orf48Q5BLP8 95 aa7.97□□□□□ -1.13
PHACTR4-203ENST00000463428 HRCT1Q6UXD1 115 aa7.96□□□□□ -1.13
PHACTR4-203ENST00000463428 A0A1W2PNM2 257 aa7.95□□□□□ -1.14
PHACTR4-203ENST00000463428 F8W1H4 67 aa7.95□□□□□ -1.14
PHACTR4-203ENST00000463428 RPS29P62273 56 aaKnown RBP7.95□□□□□ -1.14
PHACTR4-203ENST00000463428 Q6Q795 121 aa7.95□□□□□ -1.14
PHACTR4-203ENST00000463428 TEN1Q86WV5 123 aa7.94□□□□□ -1.14
PHACTR4-203ENST00000463428 DSCR8Q96T75 97 aa7.93□□□□□ -1.14
PHACTR4-203ENST00000463428 LOC110117498A0A087WWA1 95 aa7.92□□□□□ -1.14
PHACTR4-203ENST00000463428 TRBV7-7A0A0K0K1E9 115 aa7.92□□□□□ -1.14
PHACTR4-203ENST00000463428 Q5XG85 94 aa7.92□□□□□ -1.14
PHACTR4-203ENST00000463428 Q6ZQT0 140 aa7.91□□□□□ -1.14
PHACTR4-203ENST00000463428 C14orf132Q9NPU4 83 aa7.91□□□□□ -1.14
PHACTR4-203ENST00000463428 CCKP06307 115 aa7.89□□□□□ -1.15
PHACTR4-203ENST00000463428 PDE6GP18545 87 aa7.88□□□□□ -1.15
PHACTR4-203ENST00000463428 ETDBQ3ZM63 59 aa7.87□□□□□ -1.15
PHACTR4-203ENST00000463428 LIMD2Q9BT23 127 aa7.87□□□□□ -1.15
PHACTR4-203ENST00000463428 HERC1Q15751 4861 aa7.87□□□□□ -1.15
PHACTR4-203ENST00000463428 A0A087WSZ3 146 aa7.86□□□□□ -1.15
PHACTR4-203ENST00000463428 ASB16-AS1Q495Z4 193 aa7.85□□□□□ -1.15
PHACTR4-203ENST00000463428 RETNLBQ9BQ08 111 aa7.85□□□□□ -1.15
PHACTR4-203ENST00000463428 VPS25Q9BRG1 176 aa7.85□□□□□ -1.15
PHACTR4-203ENST00000463428 A0A1B0GW54 56 aa7.82□□□□□ -1.16
PHACTR4-203ENST00000463428 C21orf62-AS1Q17RA5 79 aa7.82□□□□□ -1.16
PHACTR4-203ENST00000463428 C1orf195Q5TG92 126 aa7.82□□□□□ -1.16
PHACTR4-203ENST00000463428 SS18L2Q9UHA2 77 aa7.81□□□□□ -1.16
PHACTR4-203ENST00000463428 Q96NJ1 140 aa7.79□□□□□ -1.16
PHACTR4-203ENST00000463428 FP248Q71RG6 208 aaPredicted RBP7.78□□□□□ -1.16
PHACTR4-203ENST00000463428 PRR4Q16378 134 aa7.77□□□□□ -1.17
PHACTR4-203ENST00000463428 LINC00472Q9H8W2 130 aa7.76□□□□□ -1.17
PHACTR4-203ENST00000463428 IGLV7-46A0A075B6I9 117 aa7.74□□□□□ -1.17
PHACTR4-203ENST00000463428 HMCN2Q8NDA2 5059 aa7.73□□□□□ -1.17
PHACTR4-203ENST00000463428 DEFB116Q30KQ4 102 aa7.7□□□□□ -1.18
PHACTR4-203ENST00000463428 LINC00846Q9NV44 126 aa7.7□□□□□ -1.18
PHACTR4-203ENST00000463428 NREPQ16612 68 aa7.69□□□□□ -1.18
PHACTR4-203ENST00000463428 KRTAP13-3Q3SY46 172 aa7.69□□□□□ -1.18
PHACTR4-203ENST00000463428 IGKV4-1P06312 121 aa7.68□□□□□ -1.18
PHACTR4-203ENST00000463428 TPRXLQ17RH7 258 aa7.68□□□□□ -1.18
PHACTR4-203ENST00000463428 Q6ZVQ6 151 aa7.68□□□□□ -1.18
PHACTR4-203ENST00000463428 LPAP08519 4548 aa7.65□□□□□ -1.18
PHACTR4-203ENST00000463428 FAM240AA0A1B0GVK7 77 aa7.65□□□□□ -1.18
PHACTR4-203ENST00000463428 J3KT08 172 aa7.65□□□□□ -1.18
PHACTR4-203ENST00000463428 ACYP1P07311 99 aa7.64□□□□□ -1.19
PHACTR4-203ENST00000463428 SIGMAR1Q99720 223 aa7.63□□□□□ -1.19
PHACTR4-203ENST00000463428 UBL5Q9BZL1 73 aa7.63□□□□□ -1.19
PHACTR4-203ENST00000463428 DSCR10P59022 87 aa7.61□□□□□ -1.19
PHACTR4-203ENST00000463428 C9orf92A6NGG3 77 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms