RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 C3orf84H3BNL1 204 aa7.89□□□□□ -1.15
COL4A6-204ENST00000461897 Q8NBF4 154 aa7.89□□□□□ -1.15
COL4A6-204ENST00000461897 A0A0U1RQV1 116 aa7.89□□□□□ -1.15
COL4A6-204ENST00000461897 Q6ZR54 194 aa7.89□□□□□ -1.15
COL4A6-204ENST00000461897 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.88□□□□□ -1.15
COL4A6-204ENST00000461897 FAM168BA1KXE4 195 aa7.88□□□□□ -1.15
COL4A6-204ENST00000461897 RPL37AP8A6NKH3 93 aa7.88□□□□□ -1.15
COL4A6-204ENST00000461897 C14orf177Q52M58 125 aa7.88□□□□□ -1.15
COL4A6-204ENST00000461897 C1orf137Q5JT78 98 aa7.88□□□□□ -1.15
COL4A6-204ENST00000461897 C4orf26Q17RF5 130 aa7.87□□□□□ -1.15
COL4A6-204ENST00000461897 MRPL55Q7Z7F7 128 aaKnown RBP7.87□□□□□ -1.15
COL4A6-204ENST00000461897 HECTD4Q9Y4D8 3996 aa7.87□□□□□ -1.15
COL4A6-204ENST00000461897 LCE6AA0A183 80 aa7.86□□□□□ -1.15
COL4A6-204ENST00000461897 FRAS1Q86XX4 4008 aa7.86□□□□□ -1.15
COL4A6-204ENST00000461897 ST20-AS1Q8NBB2 130 aa7.85□□□□□ -1.15
COL4A6-204ENST00000461897 SMIM26A0A096LP01 95 aa7.85□□□□□ -1.15
COL4A6-204ENST00000461897 A0A096LNI7 61 aa7.84□□□□□ -1.15
COL4A6-204ENST00000461897 LY6G6CO95867 125 aa7.84□□□□□ -1.15
COL4A6-204ENST00000461897 LINC00476Q8WZB0 136 aa7.84□□□□□ -1.15
COL4A6-204ENST00000461897 SMIM29Q86T20 159 aa7.83□□□□□ -1.16
COL4A6-204ENST00000461897 C16orf90A8MZG2 172 aa7.83□□□□□ -1.16
COL4A6-204ENST00000461897 REG3GQ6UW15 175 aa7.83□□□□□ -1.16
COL4A6-204ENST00000461897 HRCT1Q6UXD1 115 aa7.82□□□□□ -1.16
COL4A6-204ENST00000461897 SACSQ9NZJ4 4579 aa7.82□□□□□ -1.16
COL4A6-204ENST00000461897 A0A087WTM6 91 aa7.81□□□□□ -1.16
COL4A6-204ENST00000461897 DSCR10P59022 87 aa7.81□□□□□ -1.16
COL4A6-204ENST00000461897 C9orf163Q8N9P6 203 aa7.81□□□□□ -1.16
COL4A6-204ENST00000461897 IGLV8-61A0A075B6I0 122 aa7.81□□□□□ -1.16
COL4A6-204ENST00000461897 IGKV2-24A0A0C4DH68 120 aa7.81□□□□□ -1.16
COL4A6-204ENST00000461897 DNAH11Q96DT5 4516 aa7.81□□□□□ -1.16
COL4A6-204ENST00000461897 UBE2BP63146 152 aa7.8□□□□□ -1.16
COL4A6-204ENST00000461897 FP248Q71RG6 208 aaPredicted RBP7.8□□□□□ -1.16
COL4A6-204ENST00000461897 CHTF8P0CG12 524 aa7.79□□□□□ -1.16
COL4A6-204ENST00000461897 C1orf134Q5TEV5 83 aa7.79□□□□□ -1.16
COL4A6-204ENST00000461897 FAT2Q9NYQ8 4349 aa7.78□□□□□ -1.16
COL4A6-204ENST00000461897 A0A1W2PNN7 141 aa7.77□□□□□ -1.17
COL4A6-204ENST00000461897 DNAH5Q8TE73 4624 aa7.77□□□□□ -1.17
COL4A6-204ENST00000461897 ZCCHC13Q8WW36 166 aaKnown RBP7.77□□□□□ -1.17
COL4A6-204ENST00000461897 HIGD2AQ9BW72 106 aa7.76□□□□□ -1.17
COL4A6-204ENST00000461897 K7EQZ3 153 aa7.75□□□□□ -1.17
COL4A6-204ENST00000461897 IGFL1Q6UW32 110 aa7.75□□□□□ -1.17
COL4A6-204ENST00000461897 DNAH8Q96JB1 4490 aa7.75□□□□□ -1.17
COL4A6-204ENST00000461897 PANO1I0J062 215 aa7.75□□□□□ -1.17
COL4A6-204ENST00000461897 FAM30AQ9NZY2 134 aa7.75□□□□□ -1.17
COL4A6-204ENST00000461897 PKIGQ9Y2B9 76 aa7.74□□□□□ -1.17
COL4A6-204ENST00000461897 HCG22E2RYF7 251 aa7.72□□□□□ -1.17
COL4A6-204ENST00000461897 RTL8CO15255 209 aa7.72□□□□□ -1.17
COL4A6-204ENST00000461897 H0Y9J4 135 aa7.72□□□□□ -1.17
COL4A6-204ENST00000461897 SPRR1BP22528 89 aa7.72□□□□□ -1.17
COL4A6-204ENST00000461897 LINC00474Q9P2X8 69 aa7.71□□□□□ -1.18
COL4A6-204ENST00000461897 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.71□□□□□ -1.18
COL4A6-204ENST00000461897 PKD1P98161 4303 aa7.71□□□□□ -1.18
COL4A6-204ENST00000461897 PHF5AQ7RTV0 110 aaKnown RBP7.7□□□□□ -1.18
COL4A6-204ENST00000461897 SPACA4Q8TDM5 124 aa7.7□□□□□ -1.18
COL4A6-204ENST00000461897 PRLHP81277 87 aa7.69□□□□□ -1.18
COL4A6-204ENST00000461897 KRTAP11-1Q8IUC1 163 aa7.68□□□□□ -1.18
COL4A6-204ENST00000461897 FAM229BQ4G0N7 80 aa7.68□□□□□ -1.18
COL4A6-204ENST00000461897 LINC00336Q6ZUF6 198 aa7.68□□□□□ -1.18
COL4A6-204ENST00000461897 IGLV5-52A0A0A0MRZ9 124 aa7.67□□□□□ -1.18
COL4A6-204ENST00000461897 PRO0628Q9UI54 55 aa7.67□□□□□ -1.18
COL4A6-204ENST00000461897 hDV103S1A0JD37 113 aa7.66□□□□□ -1.18
COL4A6-204ENST00000461897 RYR2Q92736 4967 aa7.66□□□□□ -1.18
COL4A6-204ENST00000461897 A0A087WSZ3 146 aa7.66□□□□□ -1.18
COL4A6-204ENST00000461897 KRTAP29-1A8MX34 341 aaPredicted RBP7.66□□□□□ -1.18
COL4A6-204ENST00000461897 CYP4F30PQ9H0H9 118 aa7.66□□□□□ -1.18
COL4A6-204ENST00000461897 A0A0G2JQZ4 141 aa7.65□□□□□ -1.18
COL4A6-204ENST00000461897 UBE2AP49459 152 aa7.65□□□□□ -1.18
COL4A6-204ENST00000461897 KRTAP10-2P60368 255 aa7.64□□□□□ -1.19
COL4A6-204ENST00000461897 NDUFB1O75438 58 aa7.62□□□□□ -1.19
COL4A6-204ENST00000461897 KMT2CQ8NEZ4 4911 aaKnown RBP7.62□□□□□ -1.19
COL4A6-204ENST00000461897 LINC00472Q9H8W2 130 aa7.62□□□□□ -1.19
COL4A6-204ENST00000461897 PRR15Q8IV56 129 aa7.61□□□□□ -1.19
COL4A6-204ENST00000461897 H3BPC8 53 aa7.6□□□□□ -1.19
COL4A6-204ENST00000461897 C1orf64Q8NEQ6 169 aa7.6□□□□□ -1.19
COL4A6-204ENST00000461897 PKHD1P08F94 4074 aa7.6□□□□□ -1.19
COL4A6-204ENST00000461897 A8MWP4 228 aa7.6□□□□□ -1.19
COL4A6-204ENST00000461897 KRTAP13-1Q8IUC0 172 aa7.6□□□□□ -1.19
COL4A6-204ENST00000461897 PLAC8Q9NZF1 115 aa7.6□□□□□ -1.19
COL4A6-204ENST00000461897 MP68P56378 58 aa7.59□□□□□ -1.19
COL4A6-204ENST00000461897 DEFB116Q30KQ4 102 aa7.59□□□□□ -1.19
COL4A6-204ENST00000461897 WFDC13Q8IUB5 93 aa7.59□□□□□ -1.19
COL4A6-204ENST00000461897 TRAV22A0A0B4J277 110 aa7.58□□□□□ -1.2
COL4A6-204ENST00000461897 Q1T7F1 81 aa7.58□□□□□ -1.2
COL4A6-204ENST00000461897 SRRM2Q9UQ35 2752 aaKnown RBP7.56□□□□□ -1.2
COL4A6-204ENST00000461897 RPL37AP61513 92 aaKnown RBP7.56□□□□□ -1.2
COL4A6-204ENST00000461897 CASC2Q6XLA1 102 aa7.56□□□□□ -1.2
COL4A6-204ENST00000461897 MPLKIPQ8TAP9 179 aa7.56□□□□□ -1.2
COL4A6-204ENST00000461897 SPANXA2-OT1Q8N9U9 137 aa7.55□□□□□ -1.2
COL4A6-204ENST00000461897 LRP1BQ9NZR2 4599 aa7.55□□□□□ -1.2
COL4A6-204ENST00000461897 KRTAP10-1P60331 282 aa7.53□□□□□ -1.2
COL4A6-204ENST00000461897 Q6ZSA8 131 aa7.53□□□□□ -1.2
COL4A6-204ENST00000461897 PSORS1C2Q9UIG4 136 aa7.53□□□□□ -1.2
COL4A6-204ENST00000461897 DYNC1H1Q14204 4646 aaKnown RBP7.52□□□□□ -1.21
COL4A6-204ENST00000461897 H0Y9P7 68 aa7.51□□□□□ -1.21
COL4A6-204ENST00000461897 LINC00208Q96KT6 92 aa7.51□□□□□ -1.21
COL4A6-204ENST00000461897 MMP24-AS1A0A0U1RRL7 71 aa7.51□□□□□ -1.21
COL4A6-204ENST00000461897 ASB16-AS1Q495Z4 193 aa7.51□□□□□ -1.21
COL4A6-204ENST00000461897 CIRBP-AS1Q8TBR5 109 aa7.51□□□□□ -1.21
COL4A6-204ENST00000461897 LINC00483Q53H64 154 aa7.5□□□□□ -1.21
COL4A6-204ENST00000461897 BRK1Q8WUW1 75 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms