RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 HIST1H4GQ99525 98 aa10.21□□□□□ -0.77
VARS-220ENST00000461874 KRTAP19-2Q3LHN2 52 aa10.2□□□□□ -0.78
VARS-220ENST00000461874 C12orf57Q99622 126 aa10.2□□□□□ -0.78
VARS-220ENST00000461874 COX8AP10176 69 aa10.19□□□□□ -0.78
VARS-220ENST00000461874 Q6JHZ5 121 aa10.19□□□□□ -0.78
VARS-220ENST00000461874 OCIAD2Q56VL3 154 aa10.17□□□□□ -0.78
VARS-220ENST00000461874 BVES-AS1Q5T3Y7 98 aa10.17□□□□□ -0.78
VARS-220ENST00000461874 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.17□□□□□ -0.78
VARS-220ENST00000461874 DLEU1O43261 78 aa10.16□□□□□ -0.78
VARS-220ENST00000461874 CLEC2BQ92478 149 aa10.16□□□□□ -0.78
VARS-220ENST00000461874 RPL37P61927 97 aaKnown RBP10.15□□□□□ -0.78
VARS-220ENST00000461874 IGFL1Q6UW32 110 aa10.15□□□□□ -0.78
VARS-220ENST00000461874 TRBV7-7A0A0K0K1E9 115 aa10.14□□□□□ -0.79
VARS-220ENST00000461874 PPDPFLQ8WWR9 84 aa10.14□□□□□ -0.79
VARS-220ENST00000461874 CFC1BP0CG36 223 aa10.11□□□□□ -0.79
VARS-220ENST00000461874 CFC1P0CG37 223 aa10.11□□□□□ -0.79
VARS-220ENST00000461874 SNHG12Q9BXW3 62 aa10.11□□□□□ -0.79
VARS-220ENST00000461874 KRTAP9-6A0A140TA67 174 aa10.1□□□□□ -0.79
VARS-220ENST00000461874 C14orf144Q96I85 54 aa10.1□□□□□ -0.79
VARS-220ENST00000461874 MT1HP80294 61 aa10.09□□□□□ -0.79
VARS-220ENST00000461874 LCE2DQ5TA82 110 aaPredicted RBP10.08□□□□□ -0.8
VARS-220ENST00000461874 HIGD1BQ9P298 99 aa10.08□□□□□ -0.8
VARS-220ENST00000461874 RAB37Q96AX2 223 aa10.07□□□□□ -0.8
VARS-220ENST00000461874 H3BUT2 72 aa10.06□□□□□ -0.8
VARS-220ENST00000461874 PAM16Q9Y3D7 125 aa10.06□□□□□ -0.8
VARS-220ENST00000461874 A0A0B4J2C4 111 aa10.05□□□□□ -0.8
VARS-220ENST00000461874 SPATA45Q537H7 98 aa10.05□□□□□ -0.8
VARS-220ENST00000461874 H0YGX0 51 aa10.04□□□□□ -0.8
VARS-220ENST00000461874 SNCGO76070 127 aa10.03□□□□□ -0.8
VARS-220ENST00000461874 C2orf91Q6ZV80 131 aa10.03□□□□□ -0.8
VARS-220ENST00000461874 FAM218AQ96MZ4 157 aa10.02□□□□□ -0.81
VARS-220ENST00000461874 VAMP8Q9BV40 100 aa10.01□□□□□ -0.81
VARS-220ENST00000461874 LST1O00453 97 aa10□□□□□ -0.81
VARS-220ENST00000461874 Q6Q795 121 aa9.99□□□□□ -0.81
VARS-220ENST00000461874 OBSCN-AS1Q96MR7 158 aa9.99□□□□□ -0.81
VARS-220ENST00000461874 NDUFV3P56181 108 aaKnown RBP9.98□□□□□ -0.81
VARS-220ENST00000461874 CEND1Q8N111 149 aa9.98□□□□□ -0.81
VARS-220ENST00000461874 Q75L30 129 aa9.96□□□□□ -0.82
VARS-220ENST00000461874 PRO1854Q9UHT4 67 aa9.96□□□□□ -0.82
VARS-220ENST00000461874 TEN1Q86WV5 123 aa9.95□□□□□ -0.82
VARS-220ENST00000461874 SS18L2Q9UHA2 77 aa9.95□□□□□ -0.82
VARS-220ENST00000461874 TMEM238LA0A1B0GVL6 79 aa9.94□□□□□ -0.82
VARS-220ENST00000461874 A0A1B0GX51 115 aa9.94□□□□□ -0.82
VARS-220ENST00000461874 A6NJY4 79 aa9.94□□□□□ -0.82
VARS-220ENST00000461874 COX6B2Q6YFQ2 88 aa9.94□□□□□ -0.82
VARS-220ENST00000461874 ATP11AUNQ6ZP68 121 aa9.93□□□□□ -0.82
VARS-220ENST00000461874 GHRHP01286 108 aa9.92□□□□□ -0.82
VARS-220ENST00000461874 LORP23490 312 aaPredicted RBP9.92□□□□□ -0.82
VARS-220ENST00000461874 FXYD2P54710 66 aa9.92□□□□□ -0.82
VARS-220ENST00000461874 FLGP20930 4061 aaPredicted RBP9.92□□□□□ -0.82
VARS-220ENST00000461874 H3BMG7 143 aa9.91□□□□□ -0.82
VARS-220ENST00000461874 KRTAP10-6P60371 365 aaPredicted RBP9.91□□□□□ -0.82
VARS-220ENST00000461874 A0A087WSZ3 146 aa9.9□□□□□ -0.82
VARS-220ENST00000461874 FABP2P12104 132 aa9.9□□□□□ -0.82
VARS-220ENST00000461874 Q96NJ1 140 aa9.9□□□□□ -0.82
VARS-220ENST00000461874 FSIP2Q5CZC0 6907 aa9.89□□□□□ -0.83
VARS-220ENST00000461874 TRIAP1O43715 76 aa9.89□□□□□ -0.83
VARS-220ENST00000461874 M0R2T5 61 aa9.88□□□□□ -0.83
VARS-220ENST00000461874 C20orf166-AS1Q96NR2 134 aa9.85□□□□□ -0.83
VARS-220ENST00000461874 A0A1W2PNM2 257 aa9.84□□□□□ -0.83
VARS-220ENST00000461874 CRCT1Q9UGL9 99 aa9.84□□□□□ -0.83
VARS-220ENST00000461874 HSD52Q0P140 79 aa9.83□□□□□ -0.84
VARS-220ENST00000461874 PYY3Q5JQD4 70 aa9.83□□□□□ -0.84
VARS-220ENST00000461874 A8MUU9 505 aa9.82□□□□□ -0.84
VARS-220ENST00000461874 K7ERJ3 54 aa9.8□□□□□ -0.84
VARS-220ENST00000461874 DNAL4O96015 105 aa9.8□□□□□ -0.84
VARS-220ENST00000461874 ORMDL1Q9P0S3 153 aa9.8□□□□□ -0.84
VARS-220ENST00000461874 H3BQ85 93 aa9.79□□□□□ -0.84
VARS-220ENST00000461874 PSMB2P49721 201 aa9.79□□□□□ -0.84
VARS-220ENST00000461874 ANKRD29Q8N6D5 301 aa9.79□□□□□ -0.84
VARS-220ENST00000461874 TRBV7-4A0A0J9YYF1 115 aa9.77□□□□□ -0.85
VARS-220ENST00000461874 DSCR10P59022 87 aa9.77□□□□□ -0.85
VARS-220ENST00000461874 COX6CP09669 75 aa9.76□□□□□ -0.85
VARS-220ENST00000461874 SIGMAR1Q99720 223 aa9.76□□□□□ -0.85
VARS-220ENST00000461874 A0A1B0GV72 72 aa9.75□□□□□ -0.85
VARS-220ENST00000461874 TMEM256-PLSCR3K7ERE1 68 aa9.75□□□□□ -0.85
VARS-220ENST00000461874 IGKV4-1P06312 121 aa9.72□□□□□ -0.85
VARS-220ENST00000461874 UQCR10Q9UDW1 63 aa9.72□□□□□ -0.85
VARS-220ENST00000461874 LINC00313P59037 77 aa9.71□□□□□ -0.86
VARS-220ENST00000461874 CCKP06307 115 aa9.69□□□□□ -0.86
VARS-220ENST00000461874 UBE2V1Q13404 147 aa9.69□□□□□ -0.86
VARS-220ENST00000461874 LINC00472Q9H8W2 130 aa9.69□□□□□ -0.86
VARS-220ENST00000461874 KRTAP16-1A8MUX0 517 aa9.68□□□□□ -0.86
VARS-220ENST00000461874 TRBV20-1A0A075B6N2 111 aa9.67□□□□□ -0.86
VARS-220ENST00000461874 TRACP01848 142 aa9.67□□□□□ -0.86
VARS-220ENST00000461874 DEFB116Q30KQ4 102 aa9.66□□□□□ -0.86
VARS-220ENST00000461874 NOTCH2NLQ7Z3S9 236 aa9.66□□□□□ -0.86
VARS-220ENST00000461874 TMA7Q9Y2S6 64 aaKnown RBP9.64□□□□□ -0.87
VARS-220ENST00000461874 SCGB1C2P0DMR2 95 aa9.63□□□□□ -0.87
VARS-220ENST00000461874 RBM3P98179 157 aaKnown RBP9.61□□□□□ -0.87
VARS-220ENST00000461874 IGHV6-1A0A0B4J1U7 121 aa9.6□□□□□ -0.87
VARS-220ENST00000461874 VPS25Q9BRG1 176 aa9.59□□□□□ -0.87
VARS-220ENST00000461874 DSCR8Q96T75 97 aa9.58□□□□□ -0.88
VARS-220ENST00000461874 BAALC-AS2P0C853 105 aa9.56□□□□□ -0.88
VARS-220ENST00000461874 A0A1B0GVX0 72 aa9.54□□□□□ -0.88
VARS-220ENST00000461874 KRTAP9-8Q9BYQ0 159 aa9.54□□□□□ -0.88
VARS-220ENST00000461874 C8orf87E5RJ46 101 aa9.53□□□□□ -0.88
VARS-220ENST00000461874 C9JAW5 83 aa9.52□□□□□ -0.89
VARS-220ENST00000461874 MPLKIPQ8TAP9 179 aa9.52□□□□□ -0.89
VARS-220ENST00000461874 HRES1P13985 223 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms