RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 SMCPP49901 116 aaPredicted RBP9.27□□□□□ -0.93
TMEM39A-203ENST00000461654 RPL37AP61513 92 aaKnown RBP9.27□□□□□ -0.93
TMEM39A-203ENST00000461654 LCE2DQ5TA82 110 aaPredicted RBP9.27□□□□□ -0.93
TMEM39A-203ENST00000461654 LINC01600Q96MT4 127 aa9.27□□□□□ -0.93
TMEM39A-203ENST00000461654 ZNF706Q9Y5V0 76 aaPredicted RBP9.27□□□□□ -0.93
TMEM39A-203ENST00000461654 OXTP01178 125 aa9.26□□□□□ -0.93
TMEM39A-203ENST00000461654 TEX49A0A1B0GTD5 131 aa9.25□□□□□ -0.93
TMEM39A-203ENST00000461654 ST20-AS1Q8NBB2 130 aa9.25□□□□□ -0.93
TMEM39A-203ENST00000461654 LAMTOR3Q9UHA4 124 aa9.25□□□□□ -0.93
TMEM39A-203ENST00000461654 IGLV5-48A0A075B6I7 105 aa9.24□□□□□ -0.93
TMEM39A-203ENST00000461654 ETDBQ3ZM63 59 aa9.23□□□□□ -0.93
TMEM39A-203ENST00000461654 TEN1Q86WV5 123 aa9.23□□□□□ -0.93
TMEM39A-203ENST00000461654 Q8N377 158 aa9.22□□□□□ -0.93
TMEM39A-203ENST00000461654 JMJD7-PLA2G4BH0Y9G9 81 aa9.21□□□□□ -0.94
TMEM39A-203ENST00000461654 NDUFV3P56181 108 aaKnown RBP9.21□□□□□ -0.94
TMEM39A-203ENST00000461654 GAGE2AQ6NT46 116 aa9.21□□□□□ -0.94
TMEM39A-203ENST00000461654 LINC01547P58512 204 aaPredicted RBP9.2□□□□□ -0.94
TMEM39A-203ENST00000461654 F8WEM9 126 aa9.19□□□□□ -0.94
TMEM39A-203ENST00000461654 SPRR4Q96PI1 79 aa9.19□□□□□ -0.94
TMEM39A-203ENST00000461654 SPRR1BP22528 89 aa9.18□□□□□ -0.94
TMEM39A-203ENST00000461654 RBM3P98179 157 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-203ENST00000461654 LRP1Q07954 4544 aaKnown RBP9.15□□□□□ -0.94
TMEM39A-203ENST00000461654 A0A1B0GV72 72 aa9.15□□□□□ -0.94
TMEM39A-203ENST00000461654 SPINK6Q6UWN8 80 aa9.15□□□□□ -0.94
TMEM39A-203ENST00000461654 DSCR8Q96T75 97 aa9.14□□□□□ -0.95
TMEM39A-203ENST00000461654 LINC00483Q53H64 154 aa9.13□□□□□ -0.95
TMEM39A-203ENST00000461654 C3orf22Q8N5N4 141 aa9.13□□□□□ -0.95
TMEM39A-203ENST00000461654 OBSCN-AS1Q96MR7 158 aa9.13□□□□□ -0.95
TMEM39A-203ENST00000461654 J3QR89 54 aa9.12□□□□□ -0.95
TMEM39A-203ENST00000461654 SMIM29Q86T20 159 aa9.12□□□□□ -0.95
TMEM39A-203ENST00000461654 PDE6GP18545 87 aa9.11□□□□□ -0.95
TMEM39A-203ENST00000461654 C14orf132Q9NPU4 83 aa9.11□□□□□ -0.95
TMEM39A-203ENST00000461654 FAT3Q8TDW7 4589 aa9.1□□□□□ -0.95
TMEM39A-203ENST00000461654 C21orf62-AS1Q17RA5 79 aa9.1□□□□□ -0.95
TMEM39A-203ENST00000461654 MT1HL1P0DM35 61 aa9.09□□□□□ -0.95
TMEM39A-203ENST00000461654 LOC110117498A0A087WWA1 95 aa9.07□□□□□ -0.96
TMEM39A-203ENST00000461654 IGLV9-49A0A0B4J1Y8 123 aa9.07□□□□□ -0.96
TMEM39A-203ENST00000461654 K7ERU9 68 aa9.07□□□□□ -0.96
TMEM39A-203ENST00000461654 FAM229BQ4G0N7 80 aa9.07□□□□□ -0.96
TMEM39A-203ENST00000461654 C9orf153Q5TBE3 101 aa9.07□□□□□ -0.96
TMEM39A-203ENST00000461654 Q6JHZ5 121 aa9.07□□□□□ -0.96
TMEM39A-203ENST00000461654 PKHD1L1Q86WI1 4243 aa9.07□□□□□ -0.96
TMEM39A-203ENST00000461654 ANAPC11Q9NYG5 84 aa9.06□□□□□ -0.96
TMEM39A-203ENST00000461654 IGLV8-61A0A075B6I0 122 aa9.05□□□□□ -0.96
TMEM39A-203ENST00000461654 TRBV7-4A0A0J9YYF1 115 aa9.05□□□□□ -0.96
TMEM39A-203ENST00000461654 Q8NBF4 154 aa9.04□□□□□ -0.96
TMEM39A-203ENST00000461654 CCKP06307 115 aa9.03□□□□□ -0.96
TMEM39A-203ENST00000461654 CRYGAP11844 174 aa9.03□□□□□ -0.96
TMEM39A-203ENST00000461654 Q6ZQT0 140 aa9.03□□□□□ -0.96
TMEM39A-203ENST00000461654 VPS25Q9BRG1 176 aa9.03□□□□□ -0.96
TMEM39A-203ENST00000461654 MOBPQ13875 183 aa9.02□□□□□ -0.97
TMEM39A-203ENST00000461654 ACYP1P07311 99 aa9□□□□□ -0.97
TMEM39A-203ENST00000461654 KRTAP1-4P0C5Y4 121 aa9□□□□□ -0.97
TMEM39A-203ENST00000461654 IGFL1Q6UW32 110 aa9□□□□□ -0.97
TMEM39A-203ENST00000461654 HMCN2Q8NDA2 5059 aa8.99□□□□□ -0.97
TMEM39A-203ENST00000461654 SSBP3-AS1Q7Z2R9 100 aa8.99□□□□□ -0.97
TMEM39A-203ENST00000461654 FAM240AA0A1B0GVK7 77 aa8.97□□□□□ -0.97
TMEM39A-203ENST00000461654 A0A087X002 238 aa8.96□□□□□ -0.98
TMEM39A-203ENST00000461654 A0A1B0GW54 56 aa8.96□□□□□ -0.98
TMEM39A-203ENST00000461654 KRTAP10-8P60410 259 aa8.96□□□□□ -0.98
TMEM39A-203ENST00000461654 TYMSOSQ8TAI1 123 aa8.95□□□□□ -0.98
TMEM39A-203ENST00000461654 A0A1W2PNM2 257 aa8.94□□□□□ -0.98
TMEM39A-203ENST00000461654 A0A0G2JQZ4 141 aa8.93□□□□□ -0.98
TMEM39A-203ENST00000461654 KRTAP13-2Q52LG2 175 aa8.93□□□□□ -0.98
TMEM39A-203ENST00000461654 Q6Q795 121 aa8.93□□□□□ -0.98
TMEM39A-203ENST00000461654 PRR26Q8N8Z3 221 aa8.92□□□□□ -0.98
TMEM39A-203ENST00000461654 CD164Q04900 197 aa8.9□□□□□ -0.98
TMEM39A-203ENST00000461654 C4orf48Q5BLP8 95 aa8.9□□□□□ -0.98
TMEM39A-203ENST00000461654 UBL5Q9BZL1 73 aa8.9□□□□□ -0.98
TMEM39A-203ENST00000461654 HRCT1Q6UXD1 115 aa8.89□□□□□ -0.99
TMEM39A-203ENST00000461654 LINC00846Q9NV44 126 aa8.88□□□□□ -0.99
TMEM39A-203ENST00000461654 TRBV7-7A0A0K0K1E9 115 aa8.87□□□□□ -0.99
TMEM39A-203ENST00000461654 TNXBP22105 4242 aa8.86□□□□□ -0.99
TMEM39A-203ENST00000461654 A0A087WSZ3 146 aa8.86□□□□□ -0.99
TMEM39A-203ENST00000461654 NREPQ16612 68 aa8.86□□□□□ -0.99
TMEM39A-203ENST00000461654 SS18L2Q9UHA2 77 aa8.86□□□□□ -0.99
TMEM39A-203ENST00000461654 KRTAP3-3Q9BYR6 98 aa8.85□□□□□ -0.99
TMEM39A-203ENST00000461654 KRTAP3-2Q9BYR7 98 aa8.85□□□□□ -0.99
TMEM39A-203ENST00000461654 SPAG11AQ6PDA7 123 aa8.84□□□□□ -0.99
TMEM39A-203ENST00000461654 LINC00304Q8N9R0 145 aa8.83□□□□□ -1
TMEM39A-203ENST00000461654 Q6ZVQ6 151 aa8.82□□□□□ -1
TMEM39A-203ENST00000461654 SPINK1P00995 79 aa8.81□□□□□ -1
TMEM39A-203ENST00000461654 LINC00643Q86TS7 51 aa8.81□□□□□ -1
TMEM39A-203ENST00000461654 LIMD2Q9BT23 127 aa8.81□□□□□ -1
TMEM39A-203ENST00000461654 CDIP1Q9H305 208 aa8.81□□□□□ -1
TMEM39A-203ENST00000461654 UBR4Q5T4S7 5183 aa8.79□□□□□ -1
TMEM39A-203ENST00000461654 ATP5EP2Q5VTU8 51 aa8.77□□□□□ -1.01
TMEM39A-203ENST00000461654 RPS29P62273 56 aaKnown RBP8.76□□□□□ -1.01
TMEM39A-203ENST00000461654 BPY2O14599 106 aa8.75□□□□□ -1.01
TMEM39A-203ENST00000461654 Q5XG85 94 aa8.74□□□□□ -1.01
TMEM39A-203ENST00000461654 J3KT08 172 aa8.73□□□□□ -1.01
TMEM39A-203ENST00000461654 ASB16-AS1Q495Z4 193 aa8.73□□□□□ -1.01
TMEM39A-203ENST00000461654 SIGMAR1Q99720 223 aa8.73□□□□□ -1.01
TMEM39A-203ENST00000461654 IGKV3D-7A0A0C4DH55 119 aa8.72□□□□□ -1.01
TMEM39A-203ENST00000461654 CXCL6P80162 114 aa8.72□□□□□ -1.01
TMEM39A-203ENST00000461654 LINC00472Q9H8W2 130 aa8.71□□□□□ -1.02
TMEM39A-203ENST00000461654 LRP2P98164 4655 aa8.7□□□□□ -1.02
TMEM39A-203ENST00000461654 DEFB116Q30KQ4 102 aa8.69□□□□□ -1.02
TMEM39A-203ENST00000461654 IGKV4-1P06312 121 aa8.68□□□□□ -1.02
TMEM39A-203ENST00000461654 MT-ATP8P03928 68 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms