RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 H7C2G1 150 aa3.23□□□□□ -1.89
SPTA1-202ENST00000461624 I3L3M4 83 aa3.23□□□□□ -1.89
SPTA1-202ENST00000461624 GATA1P15976 413 aaPredicted RBP3.23□□□□□ -1.89
SPTA1-202ENST00000461624 RNASE4P34096 147 aaKnown RBP3.23□□□□□ -1.89
SPTA1-202ENST00000461624 POLR2KP53803 58 aaKnown RBP3.23□□□□□ -1.89
SPTA1-202ENST00000461624 KLKP1Q107X0 134 aa3.23□□□□□ -1.89
SPTA1-202ENST00000461624 REG3GQ6UW15 175 aa3.23□□□□□ -1.89
SPTA1-202ENST00000461624 C9orf163Q8N9P6 203 aa3.23□□□□□ -1.89
SPTA1-202ENST00000461624 NDUFA12Q9UI09 145 aa3.23□□□□□ -1.89
SPTA1-202ENST00000461624 TRAV7A0A075B6U4 112 aa3.22□□□□□ -1.89
SPTA1-202ENST00000461624 NDUFA1O15239 70 aa3.22□□□□□ -1.89
SPTA1-202ENST00000461624 ERC2-IT1O76042 136 aa3.22□□□□□ -1.89
SPTA1-202ENST00000461624 MGPP08493 103 aa3.22□□□□□ -1.89
SPTA1-202ENST00000461624 TSPEAR-AS2P59090 65 aa3.22□□□□□ -1.89
SPTA1-202ENST00000461624 SPINK6Q6UWN8 80 aa3.22□□□□□ -1.89
SPTA1-202ENST00000461624 DAZ4Q86SG3 579 aaKnown RBP3.22□□□□□ -1.89
SPTA1-202ENST00000461624 Q8TAT8 98 aa3.22□□□□□ -1.89
SPTA1-202ENST00000461624 OBSCN-AS1Q96MR7 158 aa3.22□□□□□ -1.89
SPTA1-202ENST00000461624 DSCR8Q96T75 97 aa3.22□□□□□ -1.89
SPTA1-202ENST00000461624 DAZ3Q9NR90 486 aaKnown RBP3.22□□□□□ -1.89
SPTA1-202ENST00000461624 UBE2D4Q9Y2X8 147 aa3.22□□□□□ -1.89
SPTA1-202ENST00000461624 TRGV4A0A0C4DH28 118 aa3.21□□□□□ -1.9
SPTA1-202ENST00000461624 KLLNB2CW77 178 aa3.21□□□□□ -1.9
SPTA1-202ENST00000461624 BAALC-AS2P0C853 105 aa3.21□□□□□ -1.9
SPTA1-202ENST00000461624 PDE6GP18545 87 aa3.21□□□□□ -1.9
SPTA1-202ENST00000461624 RPL28P46779 137 aaKnown RBP3.21□□□□□ -1.9
SPTA1-202ENST00000461624 C4orf26Q17RF5 130 aa3.21□□□□□ -1.9
SPTA1-202ENST00000461624 C20orf203Q8NBC4 194 aa3.21□□□□□ -1.9
SPTA1-202ENST00000461624 SPACA4Q8TDM5 124 aa3.21□□□□□ -1.9
SPTA1-202ENST00000461624 SMCR5Q8TEV8 140 aa3.21□□□□□ -1.9
SPTA1-202ENST00000461624 FAM19A4Q96LR4 140 aa3.21□□□□□ -1.9
SPTA1-202ENST00000461624 PLAC8Q9NZF1 115 aa3.21□□□□□ -1.9
SPTA1-202ENST00000461624 TRBV7-6A0A0J9YX20 115 aa3.2□□□□□ -1.9
SPTA1-202ENST00000461624 CRPP02741 224 aa3.2□□□□□ -1.9
SPTA1-202ENST00000461624 UBL5Q9BZL1 73 aa3.2□□□□□ -1.9
SPTA1-202ENST00000461624 IGKV2D-24A0A075B6R9 120 aa3.19□□□□□ -1.9
SPTA1-202ENST00000461624 IGHV1OR15-1A0A075B7D0 117 aa3.19□□□□□ -1.9
SPTA1-202ENST00000461624 CHTF8P0CG12 524 aa3.19□□□□□ -1.9
SPTA1-202ENST00000461624 PRR15Q8IV56 129 aa3.19□□□□□ -1.9
SPTA1-202ENST00000461624 C14orf178Q8N769 122 aaPredicted RBP3.19□□□□□ -1.9
SPTA1-202ENST00000461624 CLEC2BQ92478 149 aa3.19□□□□□ -1.9
SPTA1-202ENST00000461624 RMI2Q96E14 147 aa3.19□□□□□ -1.9
SPTA1-202ENST00000461624 RPL39LQ96EH5 51 aaKnown RBP3.19□□□□□ -1.9
SPTA1-202ENST00000461624 FCGBPQ9Y6R7 5405 aaPredicted RBP3.18□□□□□ -1.9
SPTA1-202ENST00000461624 USH2AO75445 5202 aa3.18□□□□□ -1.9
SPTA1-202ENST00000461624 IGLV4-3A0A075B6K6 122 aa3.18□□□□□ -1.9
SPTA1-202ENST00000461624 XCL1P47992 114 aa3.18□□□□□ -1.9
SPTA1-202ENST00000461624 CD164Q04900 197 aa3.18□□□□□ -1.9
SPTA1-202ENST00000461624 PRR4Q16378 134 aa3.18□□□□□ -1.9
SPTA1-202ENST00000461624 HIGD2BQ4VC39 106 aa3.18□□□□□ -1.9
SPTA1-202ENST00000461624 PRR9Q5T870 116 aa3.18□□□□□ -1.9
SPTA1-202ENST00000461624 FAM19A3Q7Z5A8 133 aa3.18□□□□□ -1.9
SPTA1-202ENST00000461624 Q8N377 158 aa3.18□□□□□ -1.9
SPTA1-202ENST00000461624 ZFAND2AQ8N6M9 145 aa3.18□□□□□ -1.9
SPTA1-202ENST00000461624 LINC00308Q8TCZ7 52 aa3.18□□□□□ -1.9
SPTA1-202ENST00000461624 C7orf33Q8WU49 177 aa3.18□□□□□ -1.9
SPTA1-202ENST00000461624 H7BZZ5 65 aa3.17□□□□□ -1.9
SPTA1-202ENST00000461624 CCKP06307 115 aa3.17□□□□□ -1.9
SPTA1-202ENST00000461624 DSCR10P59022 87 aa3.17□□□□□ -1.9
SPTA1-202ENST00000461624 CNBPP62633 177 aaKnown RBP3.17□□□□□ -1.9
SPTA1-202ENST00000461624 CXCL6P80162 114 aa3.17□□□□□ -1.9
SPTA1-202ENST00000461624 ORMDL1Q9P0S3 153 aa3.17□□□□□ -1.9
SPTA1-202ENST00000461624 PSORS1C2Q9UIG4 136 aa3.17□□□□□ -1.9
SPTA1-202ENST00000461624 MACF1Q9UPN3 7388 aaKnown RBP3.17□□□□□ -1.9
SPTA1-202ENST00000461624 TMEM256-PLSCR3K7ERE1 68 aa3.16□□□□□ -1.9
SPTA1-202ENST00000461624 M0QY20 66 aa3.16□□□□□ -1.9
SPTA1-202ENST00000461624 RBM3P98179 157 aaKnown RBP3.16□□□□□ -1.9
SPTA1-202ENST00000461624 PMAIP1Q13794 54 aa3.16□□□□□ -1.9
SPTA1-202ENST00000461624 LINC00242Q5T6M2 205 aa3.16□□□□□ -1.9
SPTA1-202ENST00000461624 KRTAP26-1Q6PEX3 210 aa3.16□□□□□ -1.9
SPTA1-202ENST00000461624 C20orf197Q8N268 126 aa3.16□□□□□ -1.9
SPTA1-202ENST00000461624 BRK1Q8WUW1 75 aa3.16□□□□□ -1.9
SPTA1-202ENST00000461624 IGHV3-16A0A0C4DH30 117 aa3.15□□□□□ -1.91
SPTA1-202ENST00000461624 RNASE3P12724 160 aaKnown RBP3.15□□□□□ -1.91
SPTA1-202ENST00000461624 RPL39P62891 51 aaKnown RBP3.15□□□□□ -1.91
SPTA1-202ENST00000461624 LINC00167Q96N53 147 aa3.15□□□□□ -1.91
SPTA1-202ENST00000461624 LINC00846Q9NV44 126 aa3.15□□□□□ -1.91
SPTA1-202ENST00000461624 KLK12Q9UKR0 248 aa3.15□□□□□ -1.91
SPTA1-202ENST00000461624 PKIGQ9Y2B9 76 aa3.15□□□□□ -1.91
SPTA1-202ENST00000461624 LOC110117498A0A087WWA1 95 aa3.14□□□□□ -1.91
SPTA1-202ENST00000461624 TRBV6-4A0A1B0GX49 114 aa3.14□□□□□ -1.91
SPTA1-202ENST00000461624 ENHOQ6UWT2 76 aa3.14□□□□□ -1.91
SPTA1-202ENST00000461624 FAM19A1Q7Z5A9 133 aa3.14□□□□□ -1.91
SPTA1-202ENST00000461624 OCR1Q9BZK8 76 aa3.14□□□□□ -1.91
SPTA1-202ENST00000461624 SYNE2Q8WXH0 6885 aaKnown RBP3.13□□□□□ -1.91
SPTA1-202ENST00000461624 IGKV3D-7A0A0C4DH55 119 aa3.13□□□□□ -1.91
SPTA1-202ENST00000461624 MRPL55Q7Z7F7 128 aaKnown RBP3.13□□□□□ -1.91
SPTA1-202ENST00000461624 CHCHD7Q9BUK0 85 aa3.13□□□□□ -1.91
SPTA1-202ENST00000461624 KRTAP4-1Q9BYQ7 146 aa3.13□□□□□ -1.91
SPTA1-202ENST00000461624 C14orf132Q9NPU4 83 aa3.13□□□□□ -1.91
SPTA1-202ENST00000461624 Q9UF83 564 aa3.13□□□□□ -1.91
SPTA1-202ENST00000461624 FLGP20930 4061 aaPredicted RBP3.13□□□□□ -1.91
SPTA1-202ENST00000461624 IGHV3-64A0A075B6Q5 118 aa3.12□□□□□ -1.91
SPTA1-202ENST00000461624 FP248Q71RG6 208 aaPredicted RBP3.12□□□□□ -1.91
SPTA1-202ENST00000461624 ZNF625Q96I27 306 aaPredicted RBP3.12□□□□□ -1.91
SPTA1-202ENST00000461624 CYSTM1Q9H1C7 97 aa3.12□□□□□ -1.91
SPTA1-202ENST00000461624 TRAV23DV6A0A075B6W5 121 aa3.11□□□□□ -1.91
SPTA1-202ENST00000461624 TRBV7-4A0A0J9YYF1 115 aa3.11□□□□□ -1.91
SPTA1-202ENST00000461624 A0A1B0GW54 56 aa3.11□□□□□ -1.91
SPTA1-202ENST00000461624 F8WEM9 126 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms