RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 NEBP20929 6669 aa0.12□□□□□ -2.39
VBP1-202ENST00000460509 HIVEP3Q5T1R4 2406 aa0.12□□□□□ -2.39
VBP1-202ENST00000460509 KIF1AQ12756 1690 aa0.11□□□□□ -2.39
VBP1-202ENST00000460509 IGF2RP11717 2491 aa0.11□□□□□ -2.39
VBP1-202ENST00000460509 LRP1Q07954 4544 aaKnown RBP0.11□□□□□ -2.39
VBP1-202ENST00000460509 CACNA1AO00555 2505 aa0.11□□□□□ -2.39
VBP1-202ENST00000460509 NCOR2Q9Y618 2525 aa0.11□□□□□ -2.39
VBP1-202ENST00000460509 MAST1Q9Y2H9 1570 aa0.11□□□□□ -2.39
VBP1-202ENST00000460509 CNOT1A5YKK6 2376 aaKnown RBP0.1□□□□□ -2.39
VBP1-202ENST00000460509 SFTA3P0C7M3 94 aa0.09□□□□□ -2.4
VBP1-202ENST00000460509 S100ZQ8WXG8 99 aa0.08□□□□□ -2.4
VBP1-202ENST00000460509 SPRR2GQ9BYE4 73 aa0.08□□□□□ -2.4
VBP1-202ENST00000460509 NCOR1O75376 2440 aa0.08□□□□□ -2.4
VBP1-202ENST00000460509 CLASP1Q7Z460 1538 aa0.08□□□□□ -2.4
VBP1-202ENST00000460509 CELSR1Q9NYQ6 3014 aa0.07□□□□□ -2.4
VBP1-202ENST00000460509 CROCC2H7BZ55 1655 aa0.07□□□□□ -2.4
VBP1-202ENST00000460509 EP300Q09472 2414 aaPredicted RBP0.07□□□□□ -2.4
VBP1-202ENST00000460509 ABCA2Q9BZC7 2435 aa0.07□□□□□ -2.4
VBP1-202ENST00000460509 IGSF10Q6WRI0 2623 aa0.07□□□□□ -2.4
VBP1-202ENST00000460509 KMT2CQ8NEZ4 4911 aaKnown RBP0.06□□□□□ -2.4
VBP1-202ENST00000460509 MUC2Q02817 5179 aa0.06□□□□□ -2.4
VBP1-202ENST00000460509 REV3LO60673 3130 aa0.06□□□□□ -2.4
VBP1-202ENST00000460509 PRXQ9BXM0 1461 aa0.06□□□□□ -2.4
VBP1-202ENST00000460509 H0YGG7 62 aa0.06□□□□□ -2.4
VBP1-202ENST00000460509 PREX2Q70Z35 1606 aa0.05□□□□□ -2.4
VBP1-202ENST00000460509 CSPG4Q6UVK1 2322 aa0.05□□□□□ -2.4
VBP1-202ENST00000460509 UGGT1Q9NYU2 1555 aa0.05□□□□□ -2.4
VBP1-202ENST00000460509 SSPOA2VEC9 5147 aa0.05□□□□□ -2.4
VBP1-202ENST00000460509 UBR4Q5T4S7 5183 aa0.05□□□□□ -2.4
VBP1-202ENST00000460509 TOGARAM1Q9Y4F4 1720 aa0.04□□□□□ -2.4
VBP1-202ENST00000460509 PKD1L1Q8TDX9 2849 aa0.04□□□□□ -2.4
VBP1-202ENST00000460509 PCLOQ9Y6V0 5065 aa0.04□□□□□ -2.4
VBP1-202ENST00000460509 K7EMI3 77 aa0.04□□□□□ -2.4
VBP1-202ENST00000460509 RPS27P42677 84 aaKnown RBP0.04□□□□□ -2.4
VBP1-202ENST00000460509 MINOS1Q5TGZ0 78 aa0.04□□□□□ -2.4
VBP1-202ENST00000460509 RPS27LQ71UM5 84 aaKnown RBP0.04□□□□□ -2.4
VBP1-202ENST00000460509 ATRQ13535 2644 aa0.04□□□□□ -2.4
VBP1-202ENST00000460509 CDC42BPAQ5VT25 1732 aa0.04□□□□□ -2.4
VBP1-202ENST00000460509 PTPN13Q12923 2485 aa0.04□□□□□ -2.4
VBP1-202ENST00000460509 RYR1P21817 5038 aa0.03□□□□□ -2.4
VBP1-202ENST00000460509 PRLHP81277 87 aa0.03□□□□□ -2.4
VBP1-202ENST00000460509 ANKRD36CQ5JPF3 1778 aa0.03□□□□□ -2.4
VBP1-202ENST00000460509 MUC12Q9UKN1 5478 aa0.03□□□□□ -2.41
VBP1-202ENST00000460509 CPS1P31327 1500 aa0.03□□□□□ -2.41
VBP1-202ENST00000460509 COL7A1Q02388 2944 aa0.02□□□□□ -2.41
VBP1-202ENST00000460509 M0R1W7 72 aa0.02□□□□□ -2.41
VBP1-202ENST00000460509 NCBP2-AS2Q69YL0 99 aa0.02□□□□□ -2.41
VBP1-202ENST00000460509 SMIM5Q71RC9 77 aa0.02□□□□□ -2.41
VBP1-202ENST00000460509 S4R3F8 94 aa0.02□□□□□ -2.41
VBP1-202ENST00000460509 UBR5O95071 2799 aaPredicted RBP0.02□□□□□ -2.41
VBP1-202ENST00000460509 SYCP2Q9BX26 1530 aa0.02□□□□□ -2.41
VBP1-202ENST00000460509 DMBT1Q9UGM3 2413 aaPredicted RBP0.01□□□□□ -2.41
VBP1-202ENST00000460509 SPRR2AP35326 72 aa0.01□□□□□ -2.41
VBP1-202ENST00000460509 KRTAP6-2Q3LI66 62 aa0.01□□□□□ -2.41
VBP1-202ENST00000460509 C6orf48Q9UBA6 75 aa0.01□□□□□ -2.41
VBP1-202ENST00000460509 EEA1Q15075 1411 aa0.01□□□□□ -2.41
VBP1-202ENST00000460509 MROH2AA6NES4 1674 aa0.01□□□□□ -2.41
VBP1-202ENST00000460509 RNF213Q63HN8 5207 aa0□□□□□ -2.41
VBP1-202ENST00000460509 IGIPA6NJ69 53 aa0□□□□□ -2.41
VBP1-202ENST00000460509 WT1-ASQ06250 92 aa0□□□□□ -2.41
VBP1-202ENST00000460509 DEFB106AQ8N104 65 aa0□□□□□ -2.41
VBP1-202ENST00000460509 KNL1Q8NG31 2342 aa0□□□□□ -2.41
VBP1-202ENST00000460509 KIAA1109Q2LD37 5005 aa-0.01□□□□□ -2.41
VBP1-202ENST00000460509 BSNQ9UPA5 3926 aa-0.02□□□□□ -2.41
VBP1-202ENST00000460509 SPTA1P02549 2419 aa-0.02□□□□□ -2.41
VBP1-202ENST00000460509 RYR2Q92736 4967 aa-0.03□□□□□ -2.41
VBP1-202ENST00000460509 FAT2Q9NYQ8 4349 aa-0.03□□□□□ -2.41
VBP1-202ENST00000460509 FCER1GP30273 86 aa-0.03□□□□□ -2.41
VBP1-202ENST00000460509 SERF2P84101 59 aa-0.03□□□□□ -2.41
VBP1-202ENST00000460509 NMES1Q9C002 83 aa-0.03□□□□□ -2.41
VBP1-202ENST00000460509 EPPK1P58107 5090 aaKnown RBP-0.03□□□□□ -2.41
VBP1-202ENST00000460509 PCNX1Q96RV3 2341 aa-0.03□□□□□ -2.41
VBP1-202ENST00000460509 RYR3Q15413 4870 aa-0.03□□□□□ -2.41
VBP1-202ENST00000460509 AKAP13Q12802 2813 aa-0.04□□□□□ -2.42
VBP1-202ENST00000460509 USH2AO75445 5202 aa-0.04□□□□□ -2.42
VBP1-202ENST00000460509 ADCY10Q96PN6 1610 aa-0.04□□□□□ -2.42
VBP1-202ENST00000460509 NRXN3Q9Y4C0 1643 aa-0.04□□□□□ -2.42
VBP1-202ENST00000460509 AGLP35573 1532 aa-0.04□□□□□ -2.42
VBP1-202ENST00000460509 ACANP16112 2415 aa-0.04□□□□□ -2.42
VBP1-202ENST00000460509 HMCN2Q8NDA2 5059 aa-0.04□□□□□ -2.42
VBP1-202ENST00000460509 TRANK1O15050 2925 aa-0.04□□□□□ -2.42
VBP1-202ENST00000460509 HSPG2P98160 4391 aa-0.04□□□□□ -2.42
VBP1-202ENST00000460509 HYDINQ4G0P3 5121 aa-0.04□□□□□ -2.42
VBP1-202ENST00000460509 KMT2AQ03164 3969 aa-0.04□□□□□ -2.42
VBP1-202ENST00000460509 HERC1Q15751 4861 aa-0.05□□□□□ -2.42
VBP1-202ENST00000460509 ABCA13Q86UQ4 5058 aa-0.05□□□□□ -2.42
VBP1-202ENST00000460509 LPAP08519 4548 aa-0.05□□□□□ -2.42
VBP1-202ENST00000460509 MYCBP2O75592 4640 aa-0.05□□□□□ -2.42
VBP1-202ENST00000460509 C9orf92A6NGG3 77 aa-0.05□□□□□ -2.42
VBP1-202ENST00000460509 BPTFQ12830 3046 aa-0.05□□□□□ -2.42
VBP1-202ENST00000460509 CHD8Q9HCK8 2581 aa-0.05□□□□□ -2.42
VBP1-202ENST00000460509 SPRR2EP22531 72 aa-0.06□□□□□ -2.42
VBP1-202ENST00000460509 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.06□□□□□ -2.42
VBP1-202ENST00000460509 NSD1Q96L73 2696 aaPredicted RBP-0.06□□□□□ -2.42
VBP1-202ENST00000460509 COL6A3P12111 3177 aa-0.06□□□□□ -2.42
VBP1-202ENST00000460509 STAB1Q9NY15 2570 aa-0.07□□□□□ -2.42
VBP1-202ENST00000460509 FLNCQ14315 2725 aa-0.07□□□□□ -2.42
VBP1-202ENST00000460509 FANCD2Q9BXW9 1451 aa-0.08□□□□□ -2.42
VBP1-202ENST00000460509 ABCA5Q8WWZ7 1642 aa-0.08□□□□□ -2.42
VBP1-202ENST00000460509 H3BNG1 76 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms