RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 Q6ZQY7 126 aa12.2□□□□□ -0.46
PTPN4-207ENST00000460162 hADV29S1A0JD25 119 aa12.18□□□□□ -0.46
PTPN4-207ENST00000460162 Q6JHZ5 121 aa12.18□□□□□ -0.46
PTPN4-207ENST00000460162 CFC1BP0CG36 223 aa12.17□□□□□ -0.46
PTPN4-207ENST00000460162 CLEC2BQ92478 149 aa12.17□□□□□ -0.46
PTPN4-207ENST00000460162 TRBV7-7A0A0K0K1E9 115 aa12.12□□□□□ -0.47
PTPN4-207ENST00000460162 IGFL1Q6UW32 110 aa12.12□□□□□ -0.47
PTPN4-207ENST00000460162 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.11□□□□□ -0.47
PTPN4-207ENST00000460162 PPDPFLQ8WWR9 84 aa12.11□□□□□ -0.47
PTPN4-207ENST00000460162 FSIP2Q5CZC0 6907 aa12.11□□□□□ -0.47
PTPN4-207ENST00000460162 BVES-AS1Q5T3Y7 98 aa12.1□□□□□ -0.47
PTPN4-207ENST00000460162 OCIAD2Q56VL3 154 aa12.09□□□□□ -0.47
PTPN4-207ENST00000460162 S100A6P06703 90 aa12.07□□□□□ -0.48
PTPN4-207ENST00000460162 HIST1H4GQ99525 98 aa12.07□□□□□ -0.48
PTPN4-207ENST00000460162 C12orf57Q99622 126 aa12.07□□□□□ -0.48
PTPN4-207ENST00000460162 SCGB1D1O95968 90 aa12.03□□□□□ -0.48
PTPN4-207ENST00000460162 COX6B2Q6YFQ2 88 aa12.03□□□□□ -0.48
PTPN4-207ENST00000460162 COX8AP10176 69 aa12.02□□□□□ -0.49
PTPN4-207ENST00000460162 LORP23490 312 aaPredicted RBP12.02□□□□□ -0.49
PTPN4-207ENST00000460162 SNHG12Q9BXW3 62 aa12.02□□□□□ -0.49
PTPN4-207ENST00000460162 CRCT1Q9UGL9 99 aa12.02□□□□□ -0.49
PTPN4-207ENST00000460162 KRTAP10-6P60371 365 aaPredicted RBP12.01□□□□□ -0.49
PTPN4-207ENST00000460162 DLEU1O43261 78 aa11.98□□□□□ -0.49
PTPN4-207ENST00000460162 S100A1P23297 94 aa11.98□□□□□ -0.49
PTPN4-207ENST00000460162 H3BUT2 72 aa11.97□□□□□ -0.49
PTPN4-207ENST00000460162 M0R2T5 61 aa11.97□□□□□ -0.49
PTPN4-207ENST00000460162 Q75L30 129 aa11.97□□□□□ -0.49
PTPN4-207ENST00000460162 OBSCN-AS1Q96MR7 158 aa11.97□□□□□ -0.49
PTPN4-207ENST00000460162 FLGP20930 4061 aaPredicted RBP11.96□□□□□ -0.49
PTPN4-207ENST00000460162 LST1O00453 97 aa11.95□□□□□ -0.5
PTPN4-207ENST00000460162 SS18L2Q9UHA2 77 aa11.94□□□□□ -0.5
PTPN4-207ENST00000460162 SNCGO76070 127 aa11.93□□□□□ -0.5
PTPN4-207ENST00000460162 CFC1P0CG37 223 aa11.93□□□□□ -0.5
PTPN4-207ENST00000460162 Q6Q795 121 aa11.93□□□□□ -0.5
PTPN4-207ENST00000460162 ATP11AUNQ6ZP68 121 aa11.93□□□□□ -0.5
PTPN4-207ENST00000460162 RAB37Q96AX2 223 aa11.93□□□□□ -0.5
PTPN4-207ENST00000460162 A0A0B4J2C4 111 aa11.92□□□□□ -0.5
PTPN4-207ENST00000460162 H0YGX0 51 aa11.91□□□□□ -0.5
PTPN4-207ENST00000460162 HIGD1BQ9P298 99 aa11.9□□□□□ -0.5
PTPN4-207ENST00000460162 TEN1Q86WV5 123 aa11.87□□□□□ -0.51
PTPN4-207ENST00000460162 C14orf144Q96I85 54 aa11.87□□□□□ -0.51
PTPN4-207ENST00000460162 NDUFV3P56181 108 aaKnown RBP11.86□□□□□ -0.51
PTPN4-207ENST00000460162 FAM218AQ96MZ4 157 aa11.86□□□□□ -0.51
PTPN4-207ENST00000460162 PAM16Q9Y3D7 125 aa11.85□□□□□ -0.51
PTPN4-207ENST00000460162 SPATA45Q537H7 98 aa11.84□□□□□ -0.51
PTPN4-207ENST00000460162 Q96NJ1 140 aa11.84□□□□□ -0.51
PTPN4-207ENST00000460162 GHRHP01286 108 aa11.83□□□□□ -0.52
PTPN4-207ENST00000460162 A0A1B0GX51 115 aa11.82□□□□□ -0.52
PTPN4-207ENST00000460162 C2orf91Q6ZV80 131 aa11.82□□□□□ -0.52
PTPN4-207ENST00000460162 A0A087WSZ3 146 aa11.81□□□□□ -0.52
PTPN4-207ENST00000460162 C20orf166-AS1Q96NR2 134 aa11.81□□□□□ -0.52
PTPN4-207ENST00000460162 VAMP8Q9BV40 100 aa11.8□□□□□ -0.52
PTPN4-207ENST00000460162 TMEM238LA0A1B0GVL6 79 aa11.79□□□□□ -0.52
PTPN4-207ENST00000460162 A6NJY4 79 aa11.79□□□□□ -0.52
PTPN4-207ENST00000460162 CEND1Q8N111 149 aa11.78□□□□□ -0.52
PTPN4-207ENST00000460162 A8MUU9 505 aa11.77□□□□□ -0.53
PTPN4-207ENST00000460162 H3BMG7 143 aa11.77□□□□□ -0.53
PTPN4-207ENST00000460162 PRO1854Q9UHT4 67 aa11.77□□□□□ -0.53
PTPN4-207ENST00000460162 FABP2P12104 132 aa11.74□□□□□ -0.53
PTPN4-207ENST00000460162 FXYD2P54710 66 aa11.71□□□□□ -0.53
PTPN4-207ENST00000460162 TRIAP1O43715 76 aa11.7□□□□□ -0.54
PTPN4-207ENST00000460162 A0A1W2PNM2 257 aa11.69□□□□□ -0.54
PTPN4-207ENST00000460162 SIGMAR1Q99720 223 aa11.69□□□□□ -0.54
PTPN4-207ENST00000460162 DSCR10P59022 87 aa11.67□□□□□ -0.54
PTPN4-207ENST00000460162 DNAL4O96015 105 aa11.66□□□□□ -0.54
PTPN4-207ENST00000460162 TRBV20-1A0A075B6N2 111 aa11.65□□□□□ -0.54
PTPN4-207ENST00000460162 H3BQ85 93 aa11.64□□□□□ -0.55
PTPN4-207ENST00000460162 ORMDL1Q9P0S3 153 aa11.64□□□□□ -0.55
PTPN4-207ENST00000460162 TRBV7-4A0A0J9YYF1 115 aa11.63□□□□□ -0.55
PTPN4-207ENST00000460162 ANKRD29Q8N6D5 301 aa11.62□□□□□ -0.55
PTPN4-207ENST00000460162 HSD52Q0P140 79 aa11.6□□□□□ -0.55
PTPN4-207ENST00000460162 IGKV4-1P06312 121 aa11.59□□□□□ -0.55
PTPN4-207ENST00000460162 LINC00313P59037 77 aa11.59□□□□□ -0.55
PTPN4-207ENST00000460162 PSMB2P49721 201 aa11.58□□□□□ -0.56
PTPN4-207ENST00000460162 KRTAP16-1A8MUX0 517 aa11.57□□□□□ -0.56
PTPN4-207ENST00000460162 TMEM256-PLSCR3K7ERE1 68 aa11.57□□□□□ -0.56
PTPN4-207ENST00000460162 A0A1B0GV72 72 aa11.56□□□□□ -0.56
PTPN4-207ENST00000460162 K7ERJ3 54 aa11.55□□□□□ -0.56
PTPN4-207ENST00000460162 COX6CP09669 75 aa11.55□□□□□ -0.56
PTPN4-207ENST00000460162 TRACP01848 142 aa11.52□□□□□ -0.57
PTPN4-207ENST00000460162 CCKP06307 115 aa11.52□□□□□ -0.57
PTPN4-207ENST00000460162 LINC00472Q9H8W2 130 aa11.52□□□□□ -0.57
PTPN4-207ENST00000460162 PYY3Q5JQD4 70 aa11.51□□□□□ -0.57
PTPN4-207ENST00000460162 KRTAP9-8Q9BYQ0 159 aa11.51□□□□□ -0.57
PTPN4-207ENST00000460162 UBE2V1Q13404 147 aa11.5□□□□□ -0.57
PTPN4-207ENST00000460162 DEFB116Q30KQ4 102 aa11.47□□□□□ -0.57
PTPN4-207ENST00000460162 NOTCH2NLQ7Z3S9 236 aa11.47□□□□□ -0.57
PTPN4-207ENST00000460162 FAM236DA0A1B0GTK5 79 aa11.46□□□□□ -0.57
PTPN4-207ENST00000460162 FAM236CP0DP71 79 aa11.46□□□□□ -0.57
PTPN4-207ENST00000460162 IGHV6-1A0A0B4J1U7 121 aa11.45□□□□□ -0.58
PTPN4-207ENST00000460162 MPLKIPQ8TAP9 179 aa11.43□□□□□ -0.58
PTPN4-207ENST00000460162 RBM12B-AS1Q9P1G2 102 aa11.43□□□□□ -0.58
PTPN4-207ENST00000460162 HRES1P13985 223 aa11.42□□□□□ -0.58
PTPN4-207ENST00000460162 UQCR10Q9UDW1 63 aa11.42□□□□□ -0.58
PTPN4-207ENST00000460162 C8orf87E5RJ46 101 aa11.4□□□□□ -0.58
PTPN4-207ENST00000460162 A0A1B0GVX0 72 aa11.39□□□□□ -0.59
PTPN4-207ENST00000460162 VPS25Q9BRG1 176 aa11.39□□□□□ -0.59
PTPN4-207ENST00000460162 USH2AO75445 5202 aa11.39□□□□□ -0.59
PTPN4-207ENST00000460162 RBM3P98179 157 aaKnown RBP11.38□□□□□ -0.59
PTPN4-207ENST00000460162 DSCR8Q96T75 97 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms