RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 SMR3BP02814 79 aaPredicted RBP3.59□□□□□ -1.83
RNU1-88P-201ENST00000459274 CRYGAP11844 174 aa3.59□□□□□ -1.83
RNU1-88P-201ENST00000459274 Q8N377 158 aa3.59□□□□□ -1.83
RNU1-88P-201ENST00000459274 ST20-AS1Q8NBB2 130 aa3.59□□□□□ -1.83
RNU1-88P-201ENST00000459274 FAM240AA0A1B0GVK7 77 aa3.58□□□□□ -1.84
RNU1-88P-201ENST00000459274 ERC2-IT1O76042 136 aa3.58□□□□□ -1.84
RNU1-88P-201ENST00000459274 SPRR1BP22528 89 aa3.58□□□□□ -1.84
RNU1-88P-201ENST00000459274 HAMPP81172 84 aa3.58□□□□□ -1.84
RNU1-88P-201ENST00000459274 SPRR4Q96PI1 79 aa3.58□□□□□ -1.84
RNU1-88P-201ENST00000459274 NREPQ16612 68 aa3.57□□□□□ -1.84
RNU1-88P-201ENST00000459274 FAM229BQ4G0N7 80 aa3.57□□□□□ -1.84
RNU1-88P-201ENST00000459274 SSBP3-AS1Q7Z2R9 100 aa3.57□□□□□ -1.84
RNU1-88P-201ENST00000459274 HUWE1Q7Z6Z7 4374 aaKnown RBP3.57□□□□□ -1.84
RNU1-88P-201ENST00000459274 KRTAP11-1Q8IUC1 163 aa3.57□□□□□ -1.84
RNU1-88P-201ENST00000459274 Q8NBF4 154 aa3.57□□□□□ -1.84
RNU1-88P-201ENST00000459274 OBSCN-AS1Q96MR7 158 aa3.57□□□□□ -1.84
RNU1-88P-201ENST00000459274 SS18L2Q9UHA2 77 aa3.57□□□□□ -1.84
RNU1-88P-201ENST00000459274 Q6ZQT0 140 aa3.56□□□□□ -1.84
RNU1-88P-201ENST00000459274 KRTAP13-1Q8IUC0 172 aa3.56□□□□□ -1.84
RNU1-88P-201ENST00000459274 C3orf22Q8N5N4 141 aa3.56□□□□□ -1.84
RNU1-88P-201ENST00000459274 TRBV7-4A0A0J9YYF1 115 aa3.55□□□□□ -1.84
RNU1-88P-201ENST00000459274 XGP55808 180 aa3.55□□□□□ -1.84
RNU1-88P-201ENST00000459274 MOBPQ13875 183 aa3.55□□□□□ -1.84
RNU1-88P-201ENST00000459274 LINC00483Q53H64 154 aa3.55□□□□□ -1.84
RNU1-88P-201ENST00000459274 TYMSOSQ8TAI1 123 aa3.55□□□□□ -1.84
RNU1-88P-201ENST00000459274 IGLV8-61A0A075B6I0 122 aa3.54□□□□□ -1.84
RNU1-88P-201ENST00000459274 LINC01547P58512 204 aaPredicted RBP3.54□□□□□ -1.84
RNU1-88P-201ENST00000459274 ATP5EP2Q5VTU8 51 aa3.54□□□□□ -1.84
RNU1-88P-201ENST00000459274 SIGMAR1Q99720 223 aa3.54□□□□□ -1.84
RNU1-88P-201ENST00000459274 NDUFB1O75438 58 aa3.53□□□□□ -1.84
RNU1-88P-201ENST00000459274 SPAG11AQ6PDA7 123 aa3.53□□□□□ -1.84
RNU1-88P-201ENST00000459274 IGFL1Q6UW32 110 aa3.53□□□□□ -1.84
RNU1-88P-201ENST00000459274 LINC00643Q86TS7 51 aa3.53□□□□□ -1.84
RNU1-88P-201ENST00000459274 LIMD2Q9BT23 127 aa3.53□□□□□ -1.84
RNU1-88P-201ENST00000459274 BPY2O14599 106 aa3.52□□□□□ -1.85
RNU1-88P-201ENST00000459274 CD164Q04900 197 aa3.52□□□□□ -1.85
RNU1-88P-201ENST00000459274 Q5VSD8 79 aa3.52□□□□□ -1.85
RNU1-88P-201ENST00000459274 HRCT1Q6UXD1 115 aa3.52□□□□□ -1.85
RNU1-88P-201ENST00000459274 SMIM29Q86T20 159 aa3.52□□□□□ -1.85
RNU1-88P-201ENST00000459274 DNAH9Q9NYC9 4486 aa3.51□□□□□ -1.85
RNU1-88P-201ENST00000459274 J3KT08 172 aa3.51□□□□□ -1.85
RNU1-88P-201ENST00000459274 HIST1H4AP62805 103 aaKnown RBP3.51□□□□□ -1.85
RNU1-88P-201ENST00000459274 Q6Q795 121 aa3.51□□□□□ -1.85
RNU1-88P-201ENST00000459274 PRKDCP78527 4128 aaKnown RBP3.5□□□□□ -1.85
RNU1-88P-201ENST00000459274 CSMD3Q7Z407 3707 aa3.5□□□□□ -1.85
RNU1-88P-201ENST00000459274 A0A087WSZ3 146 aa3.5□□□□□ -1.85
RNU1-88P-201ENST00000459274 SPINK1P00995 79 aa3.5□□□□□ -1.85
RNU1-88P-201ENST00000459274 Q8N1X5 172 aa3.5□□□□□ -1.85
RNU1-88P-201ENST00000459274 LINC00846Q9NV44 126 aa3.5□□□□□ -1.85
RNU1-88P-201ENST00000459274 ANAPC11Q9NYG5 84 aa3.5□□□□□ -1.85
RNU1-88P-201ENST00000459274 TRBV7-7A0A0K0K1E9 115 aa3.49□□□□□ -1.85
RNU1-88P-201ENST00000459274 SCGB1A1P11684 91 aa3.49□□□□□ -1.85
RNU1-88P-201ENST00000459274 CXCL6P80162 114 aa3.49□□□□□ -1.85
RNU1-88P-201ENST00000459274 Q6ZVQ6 151 aa3.49□□□□□ -1.85
RNU1-88P-201ENST00000459274 IMUPQ9GZP8 106 aa3.49□□□□□ -1.85
RNU1-88P-201ENST00000459274 A0A1W2PNM2 257 aa3.48□□□□□ -1.85
RNU1-88P-201ENST00000459274 LINC00304Q8N9R0 145 aa3.48□□□□□ -1.85
RNU1-88P-201ENST00000459274 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
RNU1-88P-201ENST00000459274 IGKV3D-7A0A0C4DH55 119 aa3.46□□□□□ -1.86
RNU1-88P-201ENST00000459274 IGKV4-1P06312 121 aa3.46□□□□□ -1.86
RNU1-88P-201ENST00000459274 PRR26Q8N8Z3 221 aa3.46□□□□□ -1.86
RNU1-88P-201ENST00000459274 A0A087X002 238 aa3.45□□□□□ -1.86
RNU1-88P-201ENST00000459274 A0A0G2JQZ4 141 aa3.45□□□□□ -1.86
RNU1-88P-201ENST00000459274 RPS29P62273 56 aaKnown RBP3.45□□□□□ -1.86
RNU1-88P-201ENST00000459274 CDIP1Q9H305 208 aa3.45□□□□□ -1.86
RNU1-88P-201ENST00000459274 OXTP01178 125 aa3.44□□□□□ -1.86
RNU1-88P-201ENST00000459274 KRTAP1-4P0C5Y4 121 aa3.44□□□□□ -1.86
RNU1-88P-201ENST00000459274 MT-ATP8P03928 68 aa3.43□□□□□ -1.86
RNU1-88P-201ENST00000459274 SMIM20Q8N5G0 67 aa3.43□□□□□ -1.86
RNU1-88P-201ENST00000459274 DNHD1Q96M86 4753 aa3.43□□□□□ -1.86
RNU1-88P-201ENST00000459274 A8MWP4 228 aa3.42□□□□□ -1.86
RNU1-88P-201ENST00000459274 J3QL48 77 aa3.42□□□□□ -1.86
RNU1-88P-201ENST00000459274 DEFB116Q30KQ4 102 aa3.42□□□□□ -1.86
RNU1-88P-201ENST00000459274 ASB16-AS1Q495Z4 193 aa3.42□□□□□ -1.86
RNU1-88P-201ENST00000459274 KRTAP13-2Q52LG2 175 aa3.42□□□□□ -1.86
RNU1-88P-201ENST00000459274 Q5XG85 94 aa3.42□□□□□ -1.86
RNU1-88P-201ENST00000459274 ATOX1O00244 68 aa3.41□□□□□ -1.86
RNU1-88P-201ENST00000459274 STARD9Q9P2P6 4700 aa3.41□□□□□ -1.86
RNU1-88P-201ENST00000459274 IGHV6-1A0A0B4J1U7 121 aa3.4□□□□□ -1.87
RNU1-88P-201ENST00000459274 C8orf87E5RJ46 101 aa3.4□□□□□ -1.87
RNU1-88P-201ENST00000459274 DNAH7Q8WXX0 4024 aa3.4□□□□□ -1.87
RNU1-88P-201ENST00000459274 FAM236AA0A1B0GUQ0 79 aa3.39□□□□□ -1.87
RNU1-88P-201ENST00000459274 FAM236BA0A1B0GV22 79 aa3.39□□□□□ -1.87
RNU1-88P-201ENST00000459274 KRTAP9-7A8MTY7 169 aa3.39□□□□□ -1.87
RNU1-88P-201ENST00000459274 HCG22E2RYF7 251 aa3.39□□□□□ -1.87
RNU1-88P-201ENST00000459274 NDUFS5O43920 106 aa3.39□□□□□ -1.87
RNU1-88P-201ENST00000459274 LINC00313P59037 77 aa3.39□□□□□ -1.87
RNU1-88P-201ENST00000459274 KRTAP10-4P60372 401 aaPredicted RBP3.39□□□□□ -1.87
RNU1-88P-201ENST00000459274 CASC2Q6XLA1 102 aa3.39□□□□□ -1.87
RNU1-88P-201ENST00000459274 PRR15Q8IV56 129 aa3.39□□□□□ -1.87
RNU1-88P-201ENST00000459274 ANAPC13Q9BS18 74 aa3.39□□□□□ -1.87
RNU1-88P-201ENST00000459274 LINC00472Q9H8W2 130 aa3.39□□□□□ -1.87
RNU1-88P-201ENST00000459274 ALMS1Q8TCU4 4167 aa3.39□□□□□ -1.87
RNU1-88P-201ENST00000459274 A0A1B0GVX0 72 aa3.38□□□□□ -1.87
RNU1-88P-201ENST00000459274 KRTAP9-3Q9BYQ3 159 aa3.38□□□□□ -1.87
RNU1-88P-201ENST00000459274 LYSTQ99698 3801 aa3.37□□□□□ -1.87
RNU1-88P-201ENST00000459274 hDV103S1A0JD37 113 aa3.37□□□□□ -1.87
RNU1-88P-201ENST00000459274 K7EQZ3 153 aa3.37□□□□□ -1.87
RNU1-88P-201ENST00000459274 C1orf195Q5TG92 126 aa3.37□□□□□ -1.87
RNU1-88P-201ENST00000459274 WFDC13Q8IUB5 93 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms