RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 COL7A1Q02388 2944 aa8.93□□□□□ -0.98
SCFD1-203ENST00000458591 TENM2Q9NT68 2774 aa8.93□□□□□ -0.98
SCFD1-203ENST00000458591 KRTAP11-1Q8IUC1 163 aa8.93□□□□□ -0.98
SCFD1-203ENST00000458591 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.93□□□□□ -0.98
SCFD1-203ENST00000458591 STAB2Q8WWQ8 2551 aa8.92□□□□□ -0.98
SCFD1-203ENST00000458591 DNAH7Q8WXX0 4024 aa8.92□□□□□ -0.98
SCFD1-203ENST00000458591 MGAM2Q2M2H8 2515 aa8.92□□□□□ -0.98
SCFD1-203ENST00000458591 CHTF8P0CG12 524 aa8.91□□□□□ -0.98
SCFD1-203ENST00000458591 IGFL1Q6UW32 110 aa8.91□□□□□ -0.98
SCFD1-203ENST00000458591 BRK1Q8WUW1 75 aa8.91□□□□□ -0.98
SCFD1-203ENST00000458591 HCG22E2RYF7 251 aa8.88□□□□□ -0.99
SCFD1-203ENST00000458591 RPL37AP61513 92 aaKnown RBP8.88□□□□□ -0.99
SCFD1-203ENST00000458591 PHF5AQ7RTV0 110 aaKnown RBP8.87□□□□□ -0.99
SCFD1-203ENST00000458591 hDV103S1A0JD37 113 aa8.87□□□□□ -0.99
SCFD1-203ENST00000458591 ZCCHC13Q8WW36 166 aaKnown RBP8.87□□□□□ -0.99
SCFD1-203ENST00000458591 PSCAO43653 123 aa8.86□□□□□ -0.99
SCFD1-203ENST00000458591 A0A087WSZ3 146 aa8.86□□□□□ -0.99
SCFD1-203ENST00000458591 LRCOL1A6NCL2 159 aa8.85□□□□□ -0.99
SCFD1-203ENST00000458591 WFDC13Q8IUB5 93 aa8.85□□□□□ -0.99
SCFD1-203ENST00000458591 C16orf90A8MZG2 172 aa8.84□□□□□ -0.99
SCFD1-203ENST00000458591 PRR4Q16378 134 aa8.83□□□□□ -1
SCFD1-203ENST00000458591 C1orf64Q8NEQ6 169 aa8.82□□□□□ -1
SCFD1-203ENST00000458591 PKIGQ9Y2B9 76 aa8.82□□□□□ -1
SCFD1-203ENST00000458591 NDUFB1O75438 58 aa8.81□□□□□ -1
SCFD1-203ENST00000458591 PLECQ15149 4684 aaKnown RBP8.81□□□□□ -1
SCFD1-203ENST00000458591 UBE2AP49459 152 aa8.8□□□□□ -1
SCFD1-203ENST00000458591 MP68P56378 58 aa8.79□□□□□ -1
SCFD1-203ENST00000458591 UBE2DNLQ8IWF7 75 aa8.79□□□□□ -1
SCFD1-203ENST00000458591 CYP4F30PQ9H0H9 118 aa8.79□□□□□ -1
SCFD1-203ENST00000458591 PANO1I0J062 215 aa8.79□□□□□ -1
SCFD1-203ENST00000458591 IGLV8-61A0A075B6I0 122 aa8.78□□□□□ -1
SCFD1-203ENST00000458591 CNBPP62633 177 aaKnown RBP8.78□□□□□ -1
SCFD1-203ENST00000458591 Q1T7F1 81 aa8.78□□□□□ -1
SCFD1-203ENST00000458591 APLNQ9ULZ1 77 aa8.75□□□□□ -1.01
SCFD1-203ENST00000458591 C1orf195Q5TG92 126 aa8.73□□□□□ -1.01
SCFD1-203ENST00000458591 TRAV22A0A0B4J277 110 aa8.73□□□□□ -1.01
SCFD1-203ENST00000458591 DYNC2H1Q8NCM8 4307 aaKnown RBP8.72□□□□□ -1.01
SCFD1-203ENST00000458591 LINC00208Q96KT6 92 aa8.71□□□□□ -1.02
SCFD1-203ENST00000458591 H3BPC8 53 aa8.7□□□□□ -1.02
SCFD1-203ENST00000458591 KRTAP29-1A8MX34 341 aaPredicted RBP8.7□□□□□ -1.02
SCFD1-203ENST00000458591 CASC2Q6XLA1 102 aa8.7□□□□□ -1.02
SCFD1-203ENST00000458591 V9GYY9 64 aa8.7□□□□□ -1.02
SCFD1-203ENST00000458591 B9D2Q9BPU9 175 aa8.69□□□□□ -1.02
SCFD1-203ENST00000458591 H0Y9P7 68 aa8.68□□□□□ -1.02
SCFD1-203ENST00000458591 PRR15Q8IV56 129 aa8.68□□□□□ -1.02
SCFD1-203ENST00000458591 C9orf163Q8N9P6 203 aa8.68□□□□□ -1.02
SCFD1-203ENST00000458591 PSPHP1O15172 72 aa8.67□□□□□ -1.02
SCFD1-203ENST00000458591 SPANXA2-OT1Q8N9U9 137 aa8.67□□□□□ -1.02
SCFD1-203ENST00000458591 A8MWP4 228 aa8.66□□□□□ -1.02
SCFD1-203ENST00000458591 LINC00472Q9H8W2 130 aa8.66□□□□□ -1.02
SCFD1-203ENST00000458591 SPRR1BP22528 89 aa8.66□□□□□ -1.02
SCFD1-203ENST00000458591 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.65□□□□□ -1.02
SCFD1-203ENST00000458591 H0Y9J4 135 aa8.65□□□□□ -1.02
SCFD1-203ENST00000458591 STARD9Q9P2P6 4700 aa8.65□□□□□ -1.03
SCFD1-203ENST00000458591 IGLV9-49A0A0B4J1Y8 123 aa8.64□□□□□ -1.03
SCFD1-203ENST00000458591 C14orf177Q52M58 125 aa8.64□□□□□ -1.03
SCFD1-203ENST00000458591 FRAS1Q86XX4 4008 aa8.63□□□□□ -1.03
SCFD1-203ENST00000458591 NBDYA0A0U1RRE5 68 aa8.62□□□□□ -1.03
SCFD1-203ENST00000458591 Q6ZRN7 208 aaPredicted RBP8.62□□□□□ -1.03
SCFD1-203ENST00000458591 MDFIQ99750 246 aa8.62□□□□□ -1.03
SCFD1-203ENST00000458591 ANAPC11Q9NYG5 84 aa8.61□□□□□ -1.03
SCFD1-203ENST00000458591 KRTAP13-1Q8IUC0 172 aa8.61□□□□□ -1.03
SCFD1-203ENST00000458591 DNAH8Q96JB1 4490 aa8.59□□□□□ -1.03
SCFD1-203ENST00000458591 HECTD4Q9Y4D8 3996 aa8.59□□□□□ -1.03
SCFD1-203ENST00000458591 A8MUN3 132 aa8.58□□□□□ -1.04
SCFD1-203ENST00000458591 MMP24-AS1A0A0U1RRL7 71 aa8.58□□□□□ -1.04
SCFD1-203ENST00000458591 DNAH2Q9P225 4427 aa8.58□□□□□ -1.04
SCFD1-203ENST00000458591 KMT2AQ03164 3969 aa8.57□□□□□ -1.04
SCFD1-203ENST00000458591 VPS13DQ5THJ4 4388 aa8.57□□□□□ -1.04
SCFD1-203ENST00000458591 LIMD2Q9BT23 127 aa8.56□□□□□ -1.04
SCFD1-203ENST00000458591 Q96NJ1 140 aa8.56□□□□□ -1.04
SCFD1-203ENST00000458591 MOBPQ13875 183 aa8.55□□□□□ -1.04
SCFD1-203ENST00000458591 Q5VV11 94 aa8.54□□□□□ -1.04
SCFD1-203ENST00000458591 SPACA4Q8TDM5 124 aa8.54□□□□□ -1.04
SCFD1-203ENST00000458591 Q8N9P0 234 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-203ENST00000458591 PRKDCP78527 4128 aaKnown RBP8.52□□□□□ -1.05
SCFD1-203ENST00000458591 DNAH17Q9UFH2 4485 aa8.52□□□□□ -1.05
SCFD1-203ENST00000458591 PMAIP1Q13794 54 aa8.51□□□□□ -1.05
SCFD1-203ENST00000458591 PCOTHQ58A44 107 aa8.51□□□□□ -1.05
SCFD1-203ENST00000458591 TP53AIP1Q9HCN2 124 aa8.5□□□□□ -1.05
SCFD1-203ENST00000458591 IGLV7-46A0A075B6I9 117 aa8.5□□□□□ -1.05
SCFD1-203ENST00000458591 PRR15LQ9BU68 103 aa8.5□□□□□ -1.05
SCFD1-203ENST00000458591 PSORS1C2Q9UIG4 136 aa8.5□□□□□ -1.05
SCFD1-203ENST00000458591 A0A087WTM6 91 aa8.49□□□□□ -1.05
SCFD1-203ENST00000458591 A0A087X002 238 aa8.49□□□□□ -1.05
SCFD1-203ENST00000458591 A8MU10 97 aa8.49□□□□□ -1.05
SCFD1-203ENST00000458591 CHKB-CPT1BH3BT56 60 aa8.49□□□□□ -1.05
SCFD1-203ENST00000458591 NOTCH2NLQ7Z3S9 236 aa8.49□□□□□ -1.05
SCFD1-203ENST00000458591 IGHV6-1A0A0B4J1U7 121 aa8.49□□□□□ -1.05
SCFD1-203ENST00000458591 COA5Q86WW8 74 aa8.49□□□□□ -1.05
SCFD1-203ENST00000458591 FBN3Q75N90 2809 aa8.48□□□□□ -1.05
SCFD1-203ENST00000458591 WWC2-AS2Q96NR7 200 aa8.46□□□□□ -1.06
SCFD1-203ENST00000458591 RTL8CO15255 209 aa8.46□□□□□ -1.06
SCFD1-203ENST00000458591 C8orf17Q9NRJ1 99 aa8.46□□□□□ -1.06
SCFD1-203ENST00000458591 TGP01266 2768 aa8.45□□□□□ -1.06
SCFD1-203ENST00000458591 NUPR2A6NF83 97 aa8.45□□□□□ -1.06
SCFD1-203ENST00000458591 NDUFS5O43920 106 aa8.45□□□□□ -1.06
SCFD1-203ENST00000458591 ASB16-AS1Q495Z4 193 aa8.45□□□□□ -1.06
SCFD1-203ENST00000458591 SEC61GP60059 68 aa8.44□□□□□ -1.06
SCFD1-203ENST00000458591 LINC00483Q53H64 154 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 986.6 ms