RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 HIST1H2BDP58876 126 aa5.35□□□□□ -1.55
HDLBP-227ENST00000458564 HIST1H2BCP62807 126 aa5.35□□□□□ -1.55
HDLBP-227ENST00000458564 HIST2H2BEQ16778 126 aa5.35□□□□□ -1.55
HDLBP-227ENST00000458564 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.35□□□□□ -1.55
HDLBP-227ENST00000458564 IGFL1Q6UW32 110 aa5.35□□□□□ -1.55
HDLBP-227ENST00000458564 HIST1H2BHQ93079 126 aa5.35□□□□□ -1.55
HDLBP-227ENST00000458564 HIST1H2BNQ99877 126 aa5.35□□□□□ -1.55
HDLBP-227ENST00000458564 HIST1H2BMQ99879 126 aa5.35□□□□□ -1.55
HDLBP-227ENST00000458564 FCGBPQ9Y6R7 5405 aaPredicted RBP5.34□□□□□ -1.55
HDLBP-227ENST00000458564 MUSTN1Q8IVN3 82 aa5.34□□□□□ -1.55
HDLBP-227ENST00000458564 C20orf202A1L168 122 aa5.33□□□□□ -1.56
HDLBP-227ENST00000458564 ANKRD39Q53RE8 183 aa5.33□□□□□ -1.56
HDLBP-227ENST00000458564 LINC00575Q6W349 94 aa5.33□□□□□ -1.56
HDLBP-227ENST00000458564 Q6ZQY7 126 aa5.33□□□□□ -1.56
HDLBP-227ENST00000458564 VAMP3Q15836 100 aa5.32□□□□□ -1.56
HDLBP-227ENST00000458564 C20orf166-AS1Q96NR2 134 aa5.32□□□□□ -1.56
HDLBP-227ENST00000458564 OCIAD2Q56VL3 154 aa5.31□□□□□ -1.56
HDLBP-227ENST00000458564 hADV29S1A0JD25 119 aa5.3□□□□□ -1.56
HDLBP-227ENST00000458564 KRTDAPP60985 99 aa5.3□□□□□ -1.56
HDLBP-227ENST00000458564 SLC7A5P1Q8MH63 180 aa5.3□□□□□ -1.56
HDLBP-227ENST00000458564 PPDPFLQ8WWR9 84 aa5.3□□□□□ -1.56
HDLBP-227ENST00000458564 Q96NJ1 140 aa5.3□□□□□ -1.56
HDLBP-227ENST00000458564 TRBV20-1A0A075B6N2 111 aa5.29□□□□□ -1.56
HDLBP-227ENST00000458564 A8MUU9 505 aa5.29□□□□□ -1.56
HDLBP-227ENST00000458564 LST1O00453 97 aa5.29□□□□□ -1.56
HDLBP-227ENST00000458564 COA6Q5JTJ3 125 aaKnown RBP5.29□□□□□ -1.56
HDLBP-227ENST00000458564 MT2AP02795 61 aa5.28□□□□□ -1.56
HDLBP-227ENST00000458564 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.28□□□□□ -1.56
HDLBP-227ENST00000458564 SCGB1D1O95968 90 aa5.27□□□□□ -1.57
HDLBP-227ENST00000458564 SS18L2Q9UHA2 77 aa5.27□□□□□ -1.57
HDLBP-227ENST00000458564 ATOH7Q8N100 152 aa5.26□□□□□ -1.57
HDLBP-227ENST00000458564 LCE2BO14633 110 aa5.25□□□□□ -1.57
HDLBP-227ENST00000458564 KRTAP19-1Q8IUB9 90 aa5.25□□□□□ -1.57
HDLBP-227ENST00000458564 H3BUT2 72 aa5.24□□□□□ -1.57
HDLBP-227ENST00000458564 MT1FP04733 61 aa5.24□□□□□ -1.57
HDLBP-227ENST00000458564 SNRPEP62304 92 aaKnown RBP5.24□□□□□ -1.57
HDLBP-227ENST00000458564 SNHG12Q9BXW3 62 aa5.24□□□□□ -1.57
HDLBP-227ENST00000458564 MACF1Q9UPN3 7388 aaKnown RBP5.24□□□□□ -1.57
HDLBP-227ENST00000458564 BVES-AS1Q5T3Y7 98 aa5.23□□□□□ -1.57
HDLBP-227ENST00000458564 KRTAP9-3Q9BYQ3 159 aa5.23□□□□□ -1.57
HDLBP-227ENST00000458564 TEN1Q86WV5 123 aa5.22□□□□□ -1.57
HDLBP-227ENST00000458564 MPLKIPQ8TAP9 179 aa5.21□□□□□ -1.58
HDLBP-227ENST00000458564 A0A087WSZ3 146 aa5.19□□□□□ -1.58
HDLBP-227ENST00000458564 FAM236DA0A1B0GTK5 79 aa5.19□□□□□ -1.58
HDLBP-227ENST00000458564 KRTAP16-1A8MUX0 517 aa5.19□□□□□ -1.58
HDLBP-227ENST00000458564 FAM236CP0DP71 79 aa5.19□□□□□ -1.58
HDLBP-227ENST00000458564 KRTAP10-10P60014 251 aa5.18□□□□□ -1.58
HDLBP-227ENST00000458564 SYNE2Q8WXH0 6885 aaKnown RBP5.18□□□□□ -1.58
HDLBP-227ENST00000458564 HRES1P13985 223 aa5.17□□□□□ -1.58
HDLBP-227ENST00000458564 DSCR10P59022 87 aa5.17□□□□□ -1.58
HDLBP-227ENST00000458564 C12orf57Q99622 126 aa5.17□□□□□ -1.58
HDLBP-227ENST00000458564 RBM12B-AS1Q9P1G2 102 aa5.17□□□□□ -1.58
HDLBP-227ENST00000458564 NDUFV3P56181 108 aaKnown RBP5.16□□□□□ -1.58
HDLBP-227ENST00000458564 SIGMAR1Q99720 223 aa5.15□□□□□ -1.59
HDLBP-227ENST00000458564 HSBP1L1C9JCN9 74 aa5.14□□□□□ -1.59
HDLBP-227ENST00000458564 SNCGO76070 127 aa5.14□□□□□ -1.59
HDLBP-227ENST00000458564 LINC00313P59037 77 aa5.14□□□□□ -1.59
HDLBP-227ENST00000458564 H3BMG7 143 aa5.13□□□□□ -1.59
HDLBP-227ENST00000458564 KRTAP19-6Q3LI70 58 aa5.13□□□□□ -1.59
HDLBP-227ENST00000458564 HIST1H4GQ99525 98 aa5.13□□□□□ -1.59
HDLBP-227ENST00000458564 A0A1W2PNM2 257 aa5.12□□□□□ -1.59
HDLBP-227ENST00000458564 H0YGX0 51 aa5.12□□□□□ -1.59
HDLBP-227ENST00000458564 NOTCH2NLQ7Z3S9 236 aa5.12□□□□□ -1.59
HDLBP-227ENST00000458564 FAM218AQ96MZ4 157 aa5.12□□□□□ -1.59
HDLBP-227ENST00000458564 LINC00846Q9NV44 126 aa5.12□□□□□ -1.59
HDLBP-227ENST00000458564 GHRHP01286 108 aa5.11□□□□□ -1.59
HDLBP-227ENST00000458564 HIST1H2BLQ99880 126 aa5.11□□□□□ -1.59
HDLBP-227ENST00000458564 A0A1B0GX51 115 aa5.1□□□□□ -1.59
HDLBP-227ENST00000458564 A0A0B4J2C4 111 aa5.09□□□□□ -1.59
HDLBP-227ENST00000458564 TRBV7-4A0A0J9YYF1 115 aa5.09□□□□□ -1.59
HDLBP-227ENST00000458564 IGKV4-1P06312 121 aa5.09□□□□□ -1.59
HDLBP-227ENST00000458564 HIST3H2BBQ8N257 126 aa5.09□□□□□ -1.59
HDLBP-227ENST00000458564 COX8AP10176 69 aa5.08□□□□□ -1.6
HDLBP-227ENST00000458564 DLEU1O43261 78 aa5.07□□□□□ -1.6
HDLBP-227ENST00000458564 FABP2P12104 132 aa5.07□□□□□ -1.6
HDLBP-227ENST00000458564 MTURNQ8N3F0 131 aa5.07□□□□□ -1.6
HDLBP-227ENST00000458564 RAB37Q96AX2 223 aa5.07□□□□□ -1.6
HDLBP-227ENST00000458564 LINC00472Q9H8W2 130 aa5.07□□□□□ -1.6
HDLBP-227ENST00000458564 S100A2P29034 98 aa5.06□□□□□ -1.6
HDLBP-227ENST00000458564 ANKRD29Q8N6D5 301 aa5.04□□□□□ -1.6
HDLBP-227ENST00000458564 HIGD1BQ9P298 99 aa5.04□□□□□ -1.6
HDLBP-227ENST00000458564 IGHV6-1A0A0B4J1U7 121 aa5.03□□□□□ -1.6
HDLBP-227ENST00000458564 A8MWP4 228 aa5.03□□□□□ -1.6
HDLBP-227ENST00000458564 C8orf87E5RJ46 101 aa5.02□□□□□ -1.61
HDLBP-227ENST00000458564 DEFB116Q30KQ4 102 aa5.02□□□□□ -1.61
HDLBP-227ENST00000458564 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
HDLBP-227ENST00000458564 H3BQ85 93 aa5.01□□□□□ -1.61
HDLBP-227ENST00000458564 S100A1P23297 94 aa5.01□□□□□ -1.61
HDLBP-227ENST00000458564 SPINK7P58062 85 aa5.01□□□□□ -1.61
HDLBP-227ENST00000458564 ZCCHC13Q8WW36 166 aaKnown RBP5.01□□□□□ -1.61
HDLBP-227ENST00000458564 A0A1B0GVX0 72 aa5□□□□□ -1.61
HDLBP-227ENST00000458564 TRIAP1O43715 76 aa5□□□□□ -1.61
HDLBP-227ENST00000458564 TRACP01848 142 aa5□□□□□ -1.61
HDLBP-227ENST00000458564 CCKP06307 115 aa5□□□□□ -1.61
HDLBP-227ENST00000458564 PRO1854Q9UHT4 67 aa5□□□□□ -1.61
HDLBP-227ENST00000458564 C2orf91Q6ZV80 131 aa4.99□□□□□ -1.61
HDLBP-227ENST00000458564 ORMDL1Q9P0S3 153 aa4.99□□□□□ -1.61
HDLBP-227ENST00000458564 TMEM238LA0A1B0GVL6 79 aa4.98□□□□□ -1.61
HDLBP-227ENST00000458564 A6NJY4 79 aa4.98□□□□□ -1.61
HDLBP-227ENST00000458564 TMEM256-PLSCR3K7ERE1 68 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms