RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-213ENST00000454132 H3BNG1 76 aa12.42□□□□□ -0.42
LMBR1-213ENST00000454132 Q1T7F1 81 aa12.42□□□□□ -0.42
LMBR1-213ENST00000454132 DNAH10Q8IVF4 4471 aa12.42□□□□□ -0.42
LMBR1-213ENST00000454132 REG3GQ6UW15 175 aa12.41□□□□□ -0.42
LMBR1-213ENST00000454132 LYSTQ99698 3801 aa12.4□□□□□ -0.42
LMBR1-213ENST00000454132 COL7A1Q02388 2944 aa12.4□□□□□ -0.42
LMBR1-213ENST00000454132 KMT2BQ9UMN6 2715 aaPredicted RBP12.4□□□□□ -0.43
LMBR1-213ENST00000454132 NBEAL1Q6ZS30 2694 aa12.39□□□□□ -0.43
LMBR1-213ENST00000454132 LINC00588Q9Y4M8 146 aa12.38□□□□□ -0.43
LMBR1-213ENST00000454132 TLX1NBP0CAT3 122 aa12.38□□□□□ -0.43
LMBR1-213ENST00000454132 SEC61GP60059 68 aa12.38□□□□□ -0.43
LMBR1-213ENST00000454132 MP68P56378 58 aa12.37□□□□□ -0.43
LMBR1-213ENST00000454132 A0A1B0GW54 56 aa12.36□□□□□ -0.43
LMBR1-213ENST00000454132 F8WDY8 70 aa12.35□□□□□ -0.43
LMBR1-213ENST00000454132 PLA2G2DQ9UNK4 145 aa12.35□□□□□ -0.43
LMBR1-213ENST00000454132 DNAH10OSP0CZ25 163 aa12.35□□□□□ -0.43
LMBR1-213ENST00000454132 PRR15Q8IV56 129 aa12.34□□□□□ -0.43
LMBR1-213ENST00000454132 B9D2Q9BPU9 175 aa12.33□□□□□ -0.44
LMBR1-213ENST00000454132 IGLV5-37A0A075B6J1 123 aa12.32□□□□□ -0.44
LMBR1-213ENST00000454132 H0Y9P7 68 aa12.32□□□□□ -0.44
LMBR1-213ENST00000454132 CYP4F30PQ9H0H9 118 aa12.31□□□□□ -0.44
LMBR1-213ENST00000454132 PMAIP1Q13794 54 aa12.31□□□□□ -0.44
LMBR1-213ENST00000454132 UBE2AP49459 152 aa12.3□□□□□ -0.44
LMBR1-213ENST00000454132 CASC2Q6XLA1 102 aa12.29□□□□□ -0.44
LMBR1-213ENST00000454132 J3QKU1 62 aa12.27□□□□□ -0.44
LMBR1-213ENST00000454132 KRTAP11-1Q8IUC1 163 aa12.27□□□□□ -0.45
LMBR1-213ENST00000454132 CHTF8P0CG12 524 aa12.27□□□□□ -0.45
LMBR1-213ENST00000454132 Q5VV11 94 aa12.26□□□□□ -0.45
LMBR1-213ENST00000454132 DNAH1Q9P2D7 4330 aa12.26□□□□□ -0.45
LMBR1-213ENST00000454132 TENM2Q9NT68 2774 aa12.26□□□□□ -0.45
LMBR1-213ENST00000454132 CHKB-CPT1BH3BT56 60 aa12.26□□□□□ -0.45
LMBR1-213ENST00000454132 NDUFB1O75438 58 aa12.25□□□□□ -0.45
LMBR1-213ENST00000454132 CNBPP62633 177 aaKnown RBP12.25□□□□□ -0.45
LMBR1-213ENST00000454132 PRR15LQ9BU68 103 aa12.24□□□□□ -0.45
LMBR1-213ENST00000454132 H0Y9J4 135 aa12.24□□□□□ -0.45
LMBR1-213ENST00000454132 KRTAP29-1A8MX34 341 aaPredicted RBP12.23□□□□□ -0.45
LMBR1-213ENST00000454132 PHF5AQ7RTV0 110 aaKnown RBP12.23□□□□□ -0.45
LMBR1-213ENST00000454132 SPTSSBQ8NFR3 76 aa12.22□□□□□ -0.45
LMBR1-213ENST00000454132 PCOTHQ58A44 107 aa12.21□□□□□ -0.45
LMBR1-213ENST00000454132 CMYA5Q8N3K9 4069 aa12.2□□□□□ -0.46
LMBR1-213ENST00000454132 Q8N9P0 234 aaPredicted RBP12.19□□□□□ -0.46
LMBR1-213ENST00000454132 KRTAP1-5Q9BYS1 174 aa12.15□□□□□ -0.46
LMBR1-213ENST00000454132 DNAH9Q9NYC9 4486 aa12.14□□□□□ -0.47
LMBR1-213ENST00000454132 STAB2Q8WWQ8 2551 aa12.13□□□□□ -0.47
LMBR1-213ENST00000454132 C16orf90A8MZG2 172 aa12.13□□□□□ -0.47
LMBR1-213ENST00000454132 A8MWP4 228 aa12.12□□□□□ -0.47
LMBR1-213ENST00000454132 LINC00472Q9H8W2 130 aa12.11□□□□□ -0.47
LMBR1-213ENST00000454132 COA5Q86WW8 74 aa12.1□□□□□ -0.47
LMBR1-213ENST00000454132 IGLV8-61A0A075B6I0 122 aa12.1□□□□□ -0.47
LMBR1-213ENST00000454132 A6NED7 52 aa12.08□□□□□ -0.48
LMBR1-213ENST00000454132 IGLV9-49A0A0B4J1Y8 123 aa12.07□□□□□ -0.48
LMBR1-213ENST00000454132 C9orf163Q8N9P6 203 aa12.07□□□□□ -0.48
LMBR1-213ENST00000454132 LCA10Q71F78 164 aa12.06□□□□□ -0.48
LMBR1-213ENST00000454132 SPAG11AQ6PDA7 123 aa12.06□□□□□ -0.48
LMBR1-213ENST00000454132 MGAM2Q2M2H8 2515 aa12.05□□□□□ -0.48
LMBR1-213ENST00000454132 SPANXA2-OT1Q8N9U9 137 aa12.05□□□□□ -0.48
LMBR1-213ENST00000454132 MMP24-AS1A0A0U1RRL7 71 aa12.05□□□□□ -0.48
LMBR1-213ENST00000454132 HUWE1Q7Z6Z7 4374 aaKnown RBP12.05□□□□□ -0.48
LMBR1-213ENST00000454132 NDUFS5O43920 106 aa12.04□□□□□ -0.48
LMBR1-213ENST00000454132 LIMD2Q9BT23 127 aa12.04□□□□□ -0.48
LMBR1-213ENST00000454132 CD164Q04900 197 aa12.01□□□□□ -0.49
LMBR1-213ENST00000454132 DNAH7Q8WXX0 4024 aa12□□□□□ -0.49
LMBR1-213ENST00000454132 PANO1I0J062 215 aa12□□□□□ -0.49
LMBR1-213ENST00000454132 KRTAP24-1Q3LI83 254 aa11.99□□□□□ -0.49
LMBR1-213ENST00000454132 H3BPC8 53 aa11.97□□□□□ -0.49
LMBR1-213ENST00000454132 IGHV6-1A0A0B4J1U7 121 aa11.97□□□□□ -0.49
LMBR1-213ENST00000454132 IGLV7-46A0A075B6I9 117 aa11.95□□□□□ -0.5
LMBR1-213ENST00000454132 ANAPC11Q9NYG5 84 aa11.94□□□□□ -0.5
LMBR1-213ENST00000454132 DNAH3Q8TD57 4116 aa11.94□□□□□ -0.5
LMBR1-213ENST00000454132 UBE2DNLQ8IWF7 75 aa11.94□□□□□ -0.5
LMBR1-213ENST00000454132 K7EIL1 84 aa11.9□□□□□ -0.5
LMBR1-213ENST00000454132 SPRR1BP22528 89 aa11.9□□□□□ -0.5
LMBR1-213ENST00000454132 Q75L30 129 aa11.9□□□□□ -0.5
LMBR1-213ENST00000454132 A0A087X002 238 aa11.9□□□□□ -0.51
LMBR1-213ENST00000454132 NOTCH2NLQ7Z3S9 236 aa11.9□□□□□ -0.51
LMBR1-213ENST00000454132 Q96NJ1 140 aa11.9□□□□□ -0.51
LMBR1-213ENST00000454132 MOBPQ13875 183 aa11.87□□□□□ -0.51
LMBR1-213ENST00000454132 FRAS1Q86XX4 4008 aa11.87□□□□□ -0.51
LMBR1-213ENST00000454132 LOC101927531A0A1B0GV80 90 aa11.87□□□□□ -0.51
LMBR1-213ENST00000454132 SPINK7P58062 85 aa11.87□□□□□ -0.51
LMBR1-213ENST00000454132 C8orf17Q9NRJ1 99 aa11.87□□□□□ -0.51
LMBR1-213ENST00000454132 KTN1-AS1Q86SY8 53 aa11.86□□□□□ -0.51
LMBR1-213ENST00000454132 HRES1P13985 223 aa11.84□□□□□ -0.51
LMBR1-213ENST00000454132 RBM12B-AS1Q9P1G2 102 aa11.83□□□□□ -0.52
LMBR1-213ENST00000454132 ATP11AUNQ6ZP68 121 aa11.83□□□□□ -0.52
LMBR1-213ENST00000454132 SPINK6Q6UWN8 80 aa11.82□□□□□ -0.52
LMBR1-213ENST00000454132 PRR26Q8N8Z3 221 aa11.81□□□□□ -0.52
LMBR1-213ENST00000454132 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.79□□□□□ -0.52
LMBR1-213ENST00000454132 A6NN06 94 aa11.78□□□□□ -0.52
LMBR1-213ENST00000454132 CDC42SE1Q9NRR8 79 aa11.78□□□□□ -0.52
LMBR1-213ENST00000454132 CDK2AP2O75956 126 aa11.77□□□□□ -0.53
LMBR1-213ENST00000454132 LINC01558Q9Y6Z2 57 aa11.76□□□□□ -0.53
LMBR1-213ENST00000454132 TP53AIP1Q9HCN2 124 aa11.76□□□□□ -0.53
LMBR1-213ENST00000454132 A0A1B0GVX0 72 aa11.75□□□□□ -0.53
LMBR1-213ENST00000454132 KRTAP13-1Q8IUC0 172 aa11.75□□□□□ -0.53
LMBR1-213ENST00000454132 Q6ZR54 194 aa11.74□□□□□ -0.53
LMBR1-213ENST00000454132 PLECQ15149 4684 aaKnown RBP11.73□□□□□ -0.53
LMBR1-213ENST00000454132 MRPL34Q9BQ48 92 aaKnown RBP11.73□□□□□ -0.53
LMBR1-213ENST00000454132 ASB16-AS1Q495Z4 193 aa11.72□□□□□ -0.53
LMBR1-213ENST00000454132 Q5W150 140 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms