RNA–Protein interactions for RNA: ENST00000452508.6

ATM-203, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATM, Length 12,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-203ENST00000452508 PLAC8Q9NZF1 115 aa2.33□□□□□ -2.04
ATM-203ENST00000452508 C4orf26Q17RF5 130 aa2.32□□□□□ -2.04
ATM-203ENST00000452508 SPENQ96T58 3664 aaKnown RBP2.32□□□□□ -2.04
ATM-203ENST00000452508 MUC3AQ02505 3323 aa2.32□□□□□ -2.04
ATM-203ENST00000452508 NSD1Q96L73 2696 aaPredicted RBP2.32□□□□□ -2.04
ATM-203ENST00000452508 FREM2Q5SZK8 3169 aa2.32□□□□□ -2.04
ATM-203ENST00000452508 C8orf17Q9NRJ1 99 aa2.31□□□□□ -2.04
ATM-203ENST00000452508 Q5VSD8 79 aa2.31□□□□□ -2.04
ATM-203ENST00000452508 A0A087WVE0 104 aa2.31□□□□□ -2.04
ATM-203ENST00000452508 SPINT4Q6UDR6 99 aa2.3□□□□□ -2.04
ATM-203ENST00000452508 PP632Q6XCG6 107 aa2.3□□□□□ -2.04
ATM-203ENST00000452508 Q6ZR54 194 aa2.3□□□□□ -2.04
ATM-203ENST00000452508 CELSR3Q9NYQ7 3312 aa2.3□□□□□ -2.04
ATM-203ENST00000452508 SPRR1AP35321 89 aa2.3□□□□□ -2.04
ATM-203ENST00000452508 FLNBO75369 2602 aaKnown RBP2.29□□□□□ -2.04
ATM-203ENST00000452508 ATRQ13535 2644 aa2.29□□□□□ -2.04
ATM-203ENST00000452508 COL6A5A8TX70 2615 aa2.29□□□□□ -2.04
ATM-203ENST00000452508 HECTD1Q9ULT8 2610 aa2.29□□□□□ -2.04
ATM-203ENST00000452508 FAM218AQ96MZ4 157 aa2.29□□□□□ -2.04
ATM-203ENST00000452508 SMR3BP02814 79 aaPredicted RBP2.29□□□□□ -2.04
ATM-203ENST00000452508 GIG44P09565 113 aaPredicted RBP2.28□□□□□ -2.04
ATM-203ENST00000452508 COL6A3P12111 3177 aa2.28□□□□□ -2.04
ATM-203ENST00000452508 CHD7Q9P2D1 2997 aa2.28□□□□□ -2.05
ATM-203ENST00000452508 Q8N9P0 234 aaPredicted RBP2.27□□□□□ -2.05
ATM-203ENST00000452508 BAHCC1Q9P281 2608 aa2.27□□□□□ -2.05
ATM-203ENST00000452508 MAP1AP78559 2803 aaPredicted RBP2.27□□□□□ -2.05
ATM-203ENST00000452508 ITPR3Q14573 2671 aa2.27□□□□□ -2.05
ATM-203ENST00000452508 IGFL1Q6UW32 110 aa2.27□□□□□ -2.05
ATM-203ENST00000452508 C9orf92A6NGG3 77 aa2.27□□□□□ -2.05
ATM-203ENST00000452508 PCOTHQ58A44 107 aa2.26□□□□□ -2.05
ATM-203ENST00000452508 M0QZ58 72 aa2.26□□□□□ -2.05
ATM-203ENST00000452508 TNRC18O15417 2968 aaPredicted RBP2.26□□□□□ -2.05
ATM-203ENST00000452508 FAM168BA1KXE4 195 aa2.26□□□□□ -2.05
ATM-203ENST00000452508 Q5VV11 94 aa2.26□□□□□ -2.05
ATM-203ENST00000452508 CSAG1Q6PB30 78 aa2.26□□□□□ -2.05
ATM-203ENST00000452508 C9orf129Q5T035 196 aaKnown RBP2.26□□□□□ -2.05
ATM-203ENST00000452508 NOTCH1P46531 2555 aa2.26□□□□□ -2.05
ATM-203ENST00000452508 AKAP13Q12802 2813 aa2.26□□□□□ -2.05
ATM-203ENST00000452508 PRR26Q8N8Z3 221 aa2.26□□□□□ -2.05
ATM-203ENST00000452508 STAB2Q8WWQ8 2551 aa2.26□□□□□ -2.05
ATM-203ENST00000452508 A0A1B0GU33 70 aa2.25□□□□□ -2.05
ATM-203ENST00000452508 TEP1Q99973 2627 aaKnown RBP2.25□□□□□ -2.05
ATM-203ENST00000452508 CHD9Q3L8U1 2897 aa2.25□□□□□ -2.05
ATM-203ENST00000452508 CFAP46Q8IYW2 2715 aa2.25□□□□□ -2.05
ATM-203ENST00000452508 DEFB116Q30KQ4 102 aa2.24□□□□□ -2.05
ATM-203ENST00000452508 DSCR10P59022 87 aa2.24□□□□□ -2.05
ATM-203ENST00000452508 ROMO1P60602 79 aa2.24□□□□□ -2.05
ATM-203ENST00000452508 SPATA8Q6RVD6 105 aa2.24□□□□□ -2.05
ATM-203ENST00000452508 Q8N377 158 aa2.24□□□□□ -2.05
ATM-203ENST00000452508 DMBT1Q9UGM3 2413 aaPredicted RBP2.24□□□□□ -2.05
ATM-203ENST00000452508 PRUNE2Q8WUY3 3088 aa2.24□□□□□ -2.05
ATM-203ENST00000452508 REV3LO60673 3130 aa2.23□□□□□ -2.05
ATM-203ENST00000452508 ZNF292O60281 2723 aa2.23□□□□□ -2.05
ATM-203ENST00000452508 RPL37P61927 97 aaKnown RBP2.23□□□□□ -2.05
ATM-203ENST00000452508 S4R3F8 94 aa2.23□□□□□ -2.05
ATM-203ENST00000452508 DCHS1Q96JQ0 3298 aa2.23□□□□□ -2.05
ATM-203ENST00000452508 CHD6Q8TD26 2715 aa2.23□□□□□ -2.05
ATM-203ENST00000452508 ZCCHC13Q8WW36 166 aaKnown RBP2.21□□□□□ -2.05
ATM-203ENST00000452508 LINC00472Q9H8W2 130 aa2.21□□□□□ -2.06
ATM-203ENST00000452508 Q8N1X5 172 aa2.21□□□□□ -2.06
ATM-203ENST00000452508 ITPR2Q14571 2701 aa2.21□□□□□ -2.06
ATM-203ENST00000452508 A0A1W2PNN7 141 aa2.2□□□□□ -2.06
ATM-203ENST00000452508 KRTAP16-1A8MUX0 517 aa2.2□□□□□ -2.06
ATM-203ENST00000452508 NIPBLQ6KC79 2804 aaeCLIP2.2□□□□□ -2.06
ATM-203ENST00000452508 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.19□□□□□ -2.06
ATM-203ENST00000452508 R4GN34 69 aa2.19□□□□□ -2.06
ATM-203ENST00000452508 PLAC4Q8WY50 150 aa2.19□□□□□ -2.06
ATM-203ENST00000452508 WDFY4Q6ZS81 3184 aa2.19□□□□□ -2.06
ATM-203ENST00000452508 RELNP78509 3460 aa2.18□□□□□ -2.06
ATM-203ENST00000452508 CSMD1Q96PZ7 3565 aa2.18□□□□□ -2.06
ATM-203ENST00000452508 MMP24-AS1A0A0U1RRL7 71 aa2.18□□□□□ -2.06
ATM-203ENST00000452508 A6NN06 94 aa2.18□□□□□ -2.06
ATM-203ENST00000452508 SETXQ7Z333 2677 aaKnown RBP2.17□□□□□ -2.06
ATM-203ENST00000452508 A0A1W2PNM2 257 aa2.17□□□□□ -2.06
ATM-203ENST00000452508 CSMD2Q7Z408 3487 aa2.17□□□□□ -2.06
ATM-203ENST00000452508 VPS13AQ96RL7 3174 aa2.16□□□□□ -2.06
ATM-203ENST00000452508 UTP20O75691 2785 aaKnown RBP2.16□□□□□ -2.06
ATM-203ENST00000452508 ADM2Q7Z4H4 148 aa2.15□□□□□ -2.06
ATM-203ENST00000452508 LAMA2P24043 3122 aaKnown RBP2.15□□□□□ -2.07
ATM-203ENST00000452508 TRANK1O15050 2925 aa2.15□□□□□ -2.07
ATM-203ENST00000452508 KRTAP29-1A8MX34 341 aaPredicted RBP2.14□□□□□ -2.07
ATM-203ENST00000452508 TEX15Q9BXT5 2789 aa2.14□□□□□ -2.07
ATM-203ENST00000452508 PANO1I0J062 215 aa2.14□□□□□ -2.07
ATM-203ENST00000452508 KRTAP1-5Q9BYS1 174 aa2.13□□□□□ -2.07
ATM-203ENST00000452508 KRTAP10-1P60331 282 aa2.13□□□□□ -2.07
ATM-203ENST00000452508 H1FX-AS1Q4G0G2 97 aa2.13□□□□□ -2.07
ATM-203ENST00000452508 KRTAP4-16G5E9R7 235 aaPredicted RBP2.13□□□□□ -2.07
ATM-203ENST00000452508 H3BS24 57 aa2.13□□□□□ -2.07
ATM-203ENST00000452508 SPINK7P58062 85 aa2.13□□□□□ -2.07
ATM-203ENST00000452508 IGSF10Q6WRI0 2623 aa2.12□□□□□ -2.07
ATM-203ENST00000452508 KRTAP25-1Q3LHN0 102 aa2.12□□□□□ -2.07
ATM-203ENST00000452508 KRTAP10-2P60368 255 aa2.12□□□□□ -2.07
ATM-203ENST00000452508 Q8NDZ9 215 aa2.12□□□□□ -2.07
ATM-203ENST00000452508 LAMA5O15230 3695 aa2.11□□□□□ -2.07
ATM-203ENST00000452508 A0A0G2JQZ4 141 aa2.11□□□□□ -2.07
ATM-203ENST00000452508 UBR5O95071 2799 aaPredicted RBP2.11□□□□□ -2.07
ATM-203ENST00000452508 BSNQ9UPA5 3926 aa2.11□□□□□ -2.07
ATM-203ENST00000452508 APCP25054 2843 aa2.11□□□□□ -2.07
ATM-203ENST00000452508 TNP1P09430 55 aa2.11□□□□□ -2.07
ATM-203ENST00000452508 Q5W150 140 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms