RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 XGP55808 180 aa8.71□□□□□ -1.02
USP39-207ENST00000450066 SIGMAR1Q99720 223 aa8.71□□□□□ -1.02
USP39-207ENST00000450066 LRP1BQ9NZR2 4599 aa8.7□□□□□ -1.02
USP39-207ENST00000450066 LINC00846Q9NV44 126 aa8.69□□□□□ -1.02
USP39-207ENST00000450066 F8WEM9 126 aa8.69□□□□□ -1.02
USP39-207ENST00000450066 IGLV7-43P04211 117 aa8.69□□□□□ -1.02
USP39-207ENST00000450066 HAMPP81172 84 aa8.69□□□□□ -1.02
USP39-207ENST00000450066 ZNF706Q9Y5V0 76 aaPredicted RBP8.67□□□□□ -1.02
USP39-207ENST00000450066 MT-ATP8P03928 68 aa8.66□□□□□ -1.02
USP39-207ENST00000450066 SPRR4Q96PI1 79 aa8.66□□□□□ -1.02
USP39-207ENST00000450066 DYNC1H1Q14204 4646 aaKnown RBP8.66□□□□□ -1.02
USP39-207ENST00000450066 IGLV8-61A0A075B6I0 122 aa8.66□□□□□ -1.02
USP39-207ENST00000450066 LINC00643Q86TS7 51 aa8.66□□□□□ -1.02
USP39-207ENST00000450066 LINC00483Q53H64 154 aa8.65□□□□□ -1.03
USP39-207ENST00000450066 RYR3Q15413 4870 aa8.64□□□□□ -1.03
USP39-207ENST00000450066 UBL5Q9BZL1 73 aa8.62□□□□□ -1.03
USP39-207ENST00000450066 VPS13BQ7Z7G8 4022 aa8.62□□□□□ -1.03
USP39-207ENST00000450066 A0A1B0GW54 56 aa8.61□□□□□ -1.03
USP39-207ENST00000450066 A0A1W2PNM2 257 aa8.61□□□□□ -1.03
USP39-207ENST00000450066 Q8NBF4 154 aa8.61□□□□□ -1.03
USP39-207ENST00000450066 IGFL1Q6UW32 110 aa8.6□□□□□ -1.03
USP39-207ENST00000450066 Q6JHZ5 121 aa8.6□□□□□ -1.03
USP39-207ENST00000450066 Q6ZVQ6 151 aa8.57□□□□□ -1.04
USP39-207ENST00000450066 TRBV7-7A0A0K0K1E9 115 aa8.57□□□□□ -1.04
USP39-207ENST00000450066 CRYGAP11844 174 aa8.57□□□□□ -1.04
USP39-207ENST00000450066 APOBP04114 4563 aaKnown RBP8.56□□□□□ -1.04
USP39-207ENST00000450066 A0A0G2JQZ4 141 aa8.56□□□□□ -1.04
USP39-207ENST00000450066 IGLV9-49A0A0B4J1Y8 123 aa8.55□□□□□ -1.04
USP39-207ENST00000450066 ATP5EP2Q5VTU8 51 aa8.55□□□□□ -1.04
USP39-207ENST00000450066 RPL37AP61513 92 aaKnown RBP8.54□□□□□ -1.04
USP39-207ENST00000450066 Q6Q795 121 aa8.54□□□□□ -1.04
USP39-207ENST00000450066 IMUPQ9GZP8 106 aa8.54□□□□□ -1.04
USP39-207ENST00000450066 ANAPC11Q9NYG5 84 aa8.54□□□□□ -1.04
USP39-207ENST00000450066 SCGB1A1P11684 91 aa8.53□□□□□ -1.04
USP39-207ENST00000450066 C9orf153Q5TBE3 101 aa8.53□□□□□ -1.04
USP39-207ENST00000450066 IGKV3D-7A0A0C4DH55 119 aa8.52□□□□□ -1.05
USP39-207ENST00000450066 NREPQ16612 68 aa8.52□□□□□ -1.05
USP39-207ENST00000450066 SMR3BP02814 79 aaPredicted RBP8.49□□□□□ -1.05
USP39-207ENST00000450066 CXCL6P80162 114 aa8.49□□□□□ -1.05
USP39-207ENST00000450066 MOBPQ13875 183 aa8.49□□□□□ -1.05
USP39-207ENST00000450066 A0A087WSZ3 146 aa8.47□□□□□ -1.05
USP39-207ENST00000450066 FAM229BQ4G0N7 80 aa8.46□□□□□ -1.05
USP39-207ENST00000450066 SPINK6Q6UWN8 80 aa8.46□□□□□ -1.05
USP39-207ENST00000450066 KRTAP1-4P0C5Y4 121 aa8.44□□□□□ -1.06
USP39-207ENST00000450066 FAT1Q14517 4588 aa8.44□□□□□ -1.06
USP39-207ENST00000450066 BPY2O14599 106 aa8.44□□□□□ -1.06
USP39-207ENST00000450066 HIST1H4AP62805 103 aaKnown RBP8.43□□□□□ -1.06
USP39-207ENST00000450066 SSBP3-AS1Q7Z2R9 100 aa8.43□□□□□ -1.06
USP39-207ENST00000450066 A0A087X002 238 aa8.42□□□□□ -1.06
USP39-207ENST00000450066 KRTAP10-4P60372 401 aaPredicted RBP8.42□□□□□ -1.06
USP39-207ENST00000450066 A0A087WVE0 104 aa8.4□□□□□ -1.06
USP39-207ENST00000450066 CDK2AP2O75956 126 aa8.4□□□□□ -1.06
USP39-207ENST00000450066 PCP4P48539 62 aa8.4□□□□□ -1.06
USP39-207ENST00000450066 KRTAP13-2Q52LG2 175 aa8.4□□□□□ -1.06
USP39-207ENST00000450066 PLA2G1BP04054 148 aaKnown RBP8.39□□□□□ -1.07
USP39-207ENST00000450066 FAM236AA0A1B0GUQ0 79 aa8.39□□□□□ -1.07
USP39-207ENST00000450066 FAM236BA0A1B0GV22 79 aa8.39□□□□□ -1.07
USP39-207ENST00000450066 HRCT1Q6UXD1 115 aa8.39□□□□□ -1.07
USP39-207ENST00000450066 CD164Q04900 197 aa8.38□□□□□ -1.07
USP39-207ENST00000450066 SS18L2Q9UHA2 77 aa8.37□□□□□ -1.07
USP39-207ENST00000450066 LINC00472Q9H8W2 130 aa8.36□□□□□ -1.07
USP39-207ENST00000450066 HSPG2P98160 4391 aa8.36□□□□□ -1.07
USP39-207ENST00000450066 DSCR10P59022 87 aa8.35□□□□□ -1.07
USP39-207ENST00000450066 Q8N9L7 120 aa8.35□□□□□ -1.07
USP39-207ENST00000450066 FAM229AH3BQW9 127 aa8.34□□□□□ -1.07
USP39-207ENST00000450066 IGKV4-1P06312 121 aa8.34□□□□□ -1.07
USP39-207ENST00000450066 RYR1P21817 5038 aa8.34□□□□□ -1.07
USP39-207ENST00000450066 DEFB116Q30KQ4 102 aa8.34□□□□□ -1.07
USP39-207ENST00000450066 EPPK1P58107 5090 aaKnown RBP8.32□□□□□ -1.08
USP39-207ENST00000450066 J3KT08 172 aa8.31□□□□□ -1.08
USP39-207ENST00000450066 TYMSOSQ8TAI1 123 aa8.31□□□□□ -1.08
USP39-207ENST00000450066 Q96NJ1 140 aa8.31□□□□□ -1.08
USP39-207ENST00000450066 ANAPC13Q9BS18 74 aa8.31□□□□□ -1.08
USP39-207ENST00000450066 PKHD1L1Q86WI1 4243 aa8.3□□□□□ -1.08
USP39-207ENST00000450066 K7EQZ3 153 aa8.3□□□□□ -1.08
USP39-207ENST00000450066 ATOX1O00244 68 aa8.28□□□□□ -1.08
USP39-207ENST00000450066 Q5VSD8 79 aa8.28□□□□□ -1.08
USP39-207ENST00000450066 PRR26Q8N8Z3 221 aa8.28□□□□□ -1.08
USP39-207ENST00000450066 A8MWP4 228 aa8.27□□□□□ -1.09
USP39-207ENST00000450066 ASB16-AS1Q495Z4 193 aa8.26□□□□□ -1.09
USP39-207ENST00000450066 Q5XG85 94 aa8.26□□□□□ -1.09
USP39-207ENST00000450066 KIAA1109Q2LD37 5005 aa8.26□□□□□ -1.09
USP39-207ENST00000450066 C4orf48Q5BLP8 95 aa8.25□□□□□ -1.09
USP39-207ENST00000450066 PRR15Q8IV56 129 aa8.25□□□□□ -1.09
USP39-207ENST00000450066 SPINK1P00995 79 aa8.23□□□□□ -1.09
USP39-207ENST00000450066 NDUFB1O75438 58 aa8.22□□□□□ -1.09
USP39-207ENST00000450066 LIMD2Q9BT23 127 aa8.22□□□□□ -1.09
USP39-207ENST00000450066 LINC00304Q8N9R0 145 aa8.21□□□□□ -1.1
USP39-207ENST00000450066 HCG22E2RYF7 251 aa8.2□□□□□ -1.1
USP39-207ENST00000450066 SPAG11AQ6PDA7 123 aa8.2□□□□□ -1.1
USP39-207ENST00000450066 RPS29P62273 56 aaKnown RBP8.18□□□□□ -1.1
USP39-207ENST00000450066 Q8N1X5 172 aa8.18□□□□□ -1.1
USP39-207ENST00000450066 SMIM20Q8N5G0 67 aa8.18□□□□□ -1.1
USP39-207ENST00000450066 SERP2Q8N6R1 65 aa8.18□□□□□ -1.1
USP39-207ENST00000450066 KRTAP17-1Q9BYP8 105 aa8.18□□□□□ -1.1
USP39-207ENST00000450066 A0A1B0GVX0 72 aa8.17□□□□□ -1.1
USP39-207ENST00000450066 C1orf195Q5TG92 126 aa8.17□□□□□ -1.1
USP39-207ENST00000450066 COX7CP15954 63 aa8.15□□□□□ -1.1
USP39-207ENST00000450066 TRAV7A0A075B6U4 112 aa8.15□□□□□ -1.11
USP39-207ENST00000450066 KRTAP29-1A8MX34 341 aaPredicted RBP8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms