RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 LINC01600Q96MT4 127 aa8.69□□□□□ -1.02
SHANK2-210ENST00000449116 A0A087X002 238 aa8.68□□□□□ -1.02
SHANK2-210ENST00000449116 SMIM29Q86T20 159 aa8.68□□□□□ -1.02
SHANK2-210ENST00000449116 LAMTOR3Q9UHA4 124 aa8.68□□□□□ -1.02
SHANK2-210ENST00000449116 MYCBP2O75592 4640 aa8.68□□□□□ -1.02
SHANK2-210ENST00000449116 K7EP34 96 aa8.67□□□□□ -1.02
SHANK2-210ENST00000449116 PRR26Q8N8Z3 221 aa8.67□□□□□ -1.02
SHANK2-210ENST00000449116 H3BMG7 143 aa8.66□□□□□ -1.02
SHANK2-210ENST00000449116 TMEM256-PLSCR3K7ERE1 68 aa8.66□□□□□ -1.02
SHANK2-210ENST00000449116 OXTP01178 125 aa8.66□□□□□ -1.02
SHANK2-210ENST00000449116 C3orf22Q8N5N4 141 aa8.66□□□□□ -1.02
SHANK2-210ENST00000449116 IGLV9-49A0A0B4J1Y8 123 aa8.65□□□□□ -1.02
SHANK2-210ENST00000449116 C9JAW5 83 aa8.65□□□□□ -1.02
SHANK2-210ENST00000449116 KRTAP13-2Q52LG2 175 aa8.65□□□□□ -1.02
SHANK2-210ENST00000449116 BAALC-AS2P0C853 105 aa8.64□□□□□ -1.03
SHANK2-210ENST00000449116 GTF2H5Q6ZYL4 71 aa8.64□□□□□ -1.03
SHANK2-210ENST00000449116 KRTAP29-1A8MX34 341 aaPredicted RBP8.63□□□□□ -1.03
SHANK2-210ENST00000449116 F8WEM9 126 aa8.63□□□□□ -1.03
SHANK2-210ENST00000449116 C9orf153Q5TBE3 101 aa8.63□□□□□ -1.03
SHANK2-210ENST00000449116 TNXBP22105 4242 aa8.62□□□□□ -1.03
SHANK2-210ENST00000449116 NDUFV3P56181 108 aaKnown RBP8.62□□□□□ -1.03
SHANK2-210ENST00000449116 UBE2V1Q13404 147 aa8.62□□□□□ -1.03
SHANK2-210ENST00000449116 MOBPQ13875 183 aa8.62□□□□□ -1.03
SHANK2-210ENST00000449116 TYMSOSQ8TAI1 123 aa8.62□□□□□ -1.03
SHANK2-210ENST00000449116 Q8NBF4 154 aa8.61□□□□□ -1.03
SHANK2-210ENST00000449116 KRTAP10-8P60410 259 aa8.6□□□□□ -1.03
SHANK2-210ENST00000449116 H3BT86 120 aa8.59□□□□□ -1.03
SHANK2-210ENST00000449116 SSBP3-AS1Q7Z2R9 100 aa8.59□□□□□ -1.03
SHANK2-210ENST00000449116 MTURNQ8N3F0 131 aa8.59□□□□□ -1.03
SHANK2-210ENST00000449116 HERC1Q15751 4861 aa8.59□□□□□ -1.03
SHANK2-210ENST00000449116 IGLV8-61A0A075B6I0 122 aa8.58□□□□□ -1.04
SHANK2-210ENST00000449116 A0A1B0GV90 55 aa8.58□□□□□ -1.04
SHANK2-210ENST00000449116 MT1HL1P0DM35 61 aa8.58□□□□□ -1.04
SHANK2-210ENST00000449116 ANKRD29Q8N6D5 301 aa8.58□□□□□ -1.04
SHANK2-210ENST00000449116 Q6JHZ5 121 aa8.55□□□□□ -1.04
SHANK2-210ENST00000449116 PRO0461Q9UI25 63 aa8.55□□□□□ -1.04
SHANK2-210ENST00000449116 A0A1B0GV72 72 aa8.54□□□□□ -1.04
SHANK2-210ENST00000449116 J3QL48 77 aa8.54□□□□□ -1.04
SHANK2-210ENST00000449116 SMCPP49901 116 aaPredicted RBP8.53□□□□□ -1.04
SHANK2-210ENST00000449116 LINC00304Q8N9R0 145 aa8.53□□□□□ -1.04
SHANK2-210ENST00000449116 F8W1H4 67 aa8.52□□□□□ -1.05
SHANK2-210ENST00000449116 JMJD7-PLA2G4BH0Y9G9 81 aa8.52□□□□□ -1.05
SHANK2-210ENST00000449116 RBM3P98179 157 aaKnown RBP8.52□□□□□ -1.05
SHANK2-210ENST00000449116 IGFL1Q6UW32 110 aa8.52□□□□□ -1.05
SHANK2-210ENST00000449116 A0A0G2JQZ4 141 aa8.5□□□□□ -1.05
SHANK2-210ENST00000449116 C4orf48Q5BLP8 95 aa8.5□□□□□ -1.05
SHANK2-210ENST00000449116 SPAG11AQ6PDA7 123 aa8.49□□□□□ -1.05
SHANK2-210ENST00000449116 OBSCN-AS1Q96MR7 158 aa8.49□□□□□ -1.05
SHANK2-210ENST00000449116 DSCR8Q96T75 97 aa8.49□□□□□ -1.05
SHANK2-210ENST00000449116 TRBV7-4A0A0J9YYF1 115 aa8.48□□□□□ -1.05
SHANK2-210ENST00000449116 CD164Q04900 197 aa8.48□□□□□ -1.05
SHANK2-210ENST00000449116 HRCT1Q6UXD1 115 aa8.47□□□□□ -1.05
SHANK2-210ENST00000449116 SPINK1P00995 79 aa8.46□□□□□ -1.06
SHANK2-210ENST00000449116 C14orf132Q9NPU4 83 aa8.45□□□□□ -1.06
SHANK2-210ENST00000449116 LOC110117498A0A087WWA1 95 aa8.44□□□□□ -1.06
SHANK2-210ENST00000449116 Q6Q795 121 aa8.44□□□□□ -1.06
SHANK2-210ENST00000449116 TEN1Q86WV5 123 aa8.44□□□□□ -1.06
SHANK2-210ENST00000449116 DMBT1Q9UGM3 2413 aaPredicted RBP8.43□□□□□ -1.06
SHANK2-210ENST00000449116 A0A1W2PNM2 257 aa8.43□□□□□ -1.06
SHANK2-210ENST00000449116 PDE6GP18545 87 aa8.43□□□□□ -1.06
SHANK2-210ENST00000449116 RPS29P62273 56 aaKnown RBP8.43□□□□□ -1.06
SHANK2-210ENST00000449116 TRBV7-7A0A0K0K1E9 115 aa8.42□□□□□ -1.06
SHANK2-210ENST00000449116 CCKP06307 115 aa8.42□□□□□ -1.06
SHANK2-210ENST00000449116 Q6ZQT0 140 aa8.42□□□□□ -1.06
SHANK2-210ENST00000449116 ETDBQ3ZM63 59 aa8.41□□□□□ -1.06
SHANK2-210ENST00000449116 C21orf62-AS1Q17RA5 79 aa8.4□□□□□ -1.06
SHANK2-210ENST00000449116 VPS25Q9BRG1 176 aa8.4□□□□□ -1.06
SHANK2-210ENST00000449116 LIMD2Q9BT23 127 aa8.39□□□□□ -1.07
SHANK2-210ENST00000449116 Q5XG85 94 aa8.38□□□□□ -1.07
SHANK2-210ENST00000449116 A0A087WSZ3 146 aa8.36□□□□□ -1.07
SHANK2-210ENST00000449116 A0A1B0GW54 56 aa8.34□□□□□ -1.07
SHANK2-210ENST00000449116 SS18L2Q9UHA2 77 aa8.34□□□□□ -1.07
SHANK2-210ENST00000449116 UBR4Q5T4S7 5183 aa8.33□□□□□ -1.08
SHANK2-210ENST00000449116 ASB16-AS1Q495Z4 193 aa8.31□□□□□ -1.08
SHANK2-210ENST00000449116 RETNLBQ9BQ08 111 aa8.3□□□□□ -1.08
SHANK2-210ENST00000449116 C1orf195Q5TG92 126 aa8.27□□□□□ -1.09
SHANK2-210ENST00000449116 FP248Q71RG6 208 aaPredicted RBP8.24□□□□□ -1.09
SHANK2-210ENST00000449116 Q96NJ1 140 aa8.23□□□□□ -1.09
SHANK2-210ENST00000449116 LINC00472Q9H8W2 130 aa8.23□□□□□ -1.09
SHANK2-210ENST00000449116 PRR4Q16378 134 aa8.22□□□□□ -1.09
SHANK2-210ENST00000449116 NREPQ16612 68 aa8.22□□□□□ -1.09
SHANK2-210ENST00000449116 LINC00846Q9NV44 126 aa8.21□□□□□ -1.1
SHANK2-210ENST00000449116 IGLV7-46A0A075B6I9 117 aa8.2□□□□□ -1.1
SHANK2-210ENST00000449116 FAM240AA0A1B0GVK7 77 aa8.19□□□□□ -1.1
SHANK2-210ENST00000449116 ACYP1P07311 99 aa8.19□□□□□ -1.1
SHANK2-210ENST00000449116 J3QR89 54 aa8.18□□□□□ -1.1
SHANK2-210ENST00000449116 DEFB116Q30KQ4 102 aa8.18□□□□□ -1.1
SHANK2-210ENST00000449116 UBL5Q9BZL1 73 aa8.18□□□□□ -1.1
SHANK2-210ENST00000449116 HMCN2Q8NDA2 5059 aa8.18□□□□□ -1.1
SHANK2-210ENST00000449116 IGKV4-1P06312 121 aa8.17□□□□□ -1.1
SHANK2-210ENST00000449116 Q6ZVQ6 151 aa8.17□□□□□ -1.1
SHANK2-210ENST00000449116 J3KT08 172 aa8.16□□□□□ -1.1
SHANK2-210ENST00000449116 SIGMAR1Q99720 223 aa8.16□□□□□ -1.1
SHANK2-210ENST00000449116 BPY2O14599 106 aa8.11□□□□□ -1.11
SHANK2-210ENST00000449116 TPRXLQ17RH7 258 aa8.11□□□□□ -1.11
SHANK2-210ENST00000449116 KRTAP13-3Q3SY46 172 aa8.1□□□□□ -1.11
SHANK2-210ENST00000449116 A8MWP4 228 aa8.09□□□□□ -1.11
SHANK2-210ENST00000449116 K7ERU9 68 aa8.09□□□□□ -1.11
SHANK2-210ENST00000449116 NDUFB1O75438 58 aa8.08□□□□□ -1.12
SHANK2-210ENST00000449116 DSCR10P59022 87 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms