RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 RAB37Q96AX2 223 aa8.35□□□□□ -1.07
USP39-206ENST00000448971 TEX49A0A1B0GTD5 131 aa8.34□□□□□ -1.07
USP39-206ENST00000448971 Q1RN00 199 aa8.34□□□□□ -1.07
USP39-206ENST00000448971 H7C2G1 150 aa8.33□□□□□ -1.08
USP39-206ENST00000448971 BVES-AS1Q5T3Y7 98 aa8.31□□□□□ -1.08
USP39-206ENST00000448971 IGLV5-48A0A075B6I7 105 aa8.3□□□□□ -1.08
USP39-206ENST00000448971 IGLV7-46A0A075B6I9 117 aa8.3□□□□□ -1.08
USP39-206ENST00000448971 A0A0B4J2C4 111 aa8.3□□□□□ -1.08
USP39-206ENST00000448971 CFC1BP0CG36 223 aa8.3□□□□□ -1.08
USP39-206ENST00000448971 CFC1P0CG37 223 aa8.3□□□□□ -1.08
USP39-206ENST00000448971 RPS29P62273 56 aaKnown RBP8.3□□□□□ -1.08
USP39-206ENST00000448971 LINC00575Q6W349 94 aa8.3□□□□□ -1.08
USP39-206ENST00000448971 CEND1Q8N111 149 aa8.3□□□□□ -1.08
USP39-206ENST00000448971 LINC01547P58512 204 aaPredicted RBP8.29□□□□□ -1.08
USP39-206ENST00000448971 hADV29S1A0JD25 119 aa8.28□□□□□ -1.08
USP39-206ENST00000448971 Q6ZQY7 126 aa8.28□□□□□ -1.08
USP39-206ENST00000448971 KRTAP9-9Q9BYP9 154 aa8.28□□□□□ -1.08
USP39-206ENST00000448971 KRTAP9-4Q9BYQ2 154 aa8.28□□□□□ -1.08
USP39-206ENST00000448971 HRCT1Q6UXD1 115 aa8.27□□□□□ -1.09
USP39-206ENST00000448971 FP248Q71RG6 208 aaPredicted RBP8.27□□□□□ -1.09
USP39-206ENST00000448971 MUC17Q685J3 4493 aa8.26□□□□□ -1.09
USP39-206ENST00000448971 F8WEM9 126 aa8.26□□□□□ -1.09
USP39-206ENST00000448971 FXYD2P54710 66 aa8.26□□□□□ -1.09
USP39-206ENST00000448971 HSD52Q0P140 79 aa8.26□□□□□ -1.09
USP39-206ENST00000448971 PRO1933Q9H354 126 aa8.26□□□□□ -1.09
USP39-206ENST00000448971 TPRXLQ17RH7 258 aa8.25□□□□□ -1.09
USP39-206ENST00000448971 SMIM29Q86T20 159 aa8.25□□□□□ -1.09
USP39-206ENST00000448971 Q8N377 158 aa8.25□□□□□ -1.09
USP39-206ENST00000448971 LIMD2Q9BT23 127 aa8.25□□□□□ -1.09
USP39-206ENST00000448971 UQCR10Q9UDW1 63 aa8.25□□□□□ -1.09
USP39-206ENST00000448971 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.23□□□□□ -1.09
USP39-206ENST00000448971 PRO1854Q9UHT4 67 aa8.23□□□□□ -1.09
USP39-206ENST00000448971 KRTAP19-1Q8IUB9 90 aa8.22□□□□□ -1.09
USP39-206ENST00000448971 SNCGO76070 127 aa8.21□□□□□ -1.1
USP39-206ENST00000448971 H0YGX0 51 aa8.2□□□□□ -1.1
USP39-206ENST00000448971 K7ERJ3 54 aa8.19□□□□□ -1.1
USP39-206ENST00000448971 CD164Q04900 197 aa8.19□□□□□ -1.1
USP39-206ENST00000448971 A0A0G2JQZ4 141 aa8.18□□□□□ -1.1
USP39-206ENST00000448971 PPDPFLQ8WWR9 84 aa8.17□□□□□ -1.1
USP39-206ENST00000448971 FAM218AQ96MZ4 157 aa8.17□□□□□ -1.1
USP39-206ENST00000448971 TRIAP1O43715 76 aa8.16□□□□□ -1.1
USP39-206ENST00000448971 PSMB2P49721 201 aa8.16□□□□□ -1.1
USP39-206ENST00000448971 SNHG12Q9BXW3 62 aa8.16□□□□□ -1.1
USP39-206ENST00000448971 KRTAP4-8A0A0G2JLE6 195 aa8.15□□□□□ -1.1
USP39-206ENST00000448971 SMIM6P0DI80 62 aa8.15□□□□□ -1.1
USP39-206ENST00000448971 KRTAP13-3Q3SY46 172 aa8.15□□□□□ -1.1
USP39-206ENST00000448971 OCIAD2Q56VL3 154 aa8.15□□□□□ -1.1
USP39-206ENST00000448971 Q6JHZ5 121 aa8.14□□□□□ -1.11
USP39-206ENST00000448971 SVIPQ8NHG7 77 aa8.14□□□□□ -1.11
USP39-206ENST00000448971 CLEC2BQ92478 149 aa8.14□□□□□ -1.11
USP39-206ENST00000448971 A0A1B0GX51 115 aa8.13□□□□□ -1.11
USP39-206ENST00000448971 IGLV8-61A0A075B6I0 122 aa8.11□□□□□ -1.11
USP39-206ENST00000448971 H3BUT2 72 aa8.11□□□□□ -1.11
USP39-206ENST00000448971 DNAL4O96015 105 aa8.11□□□□□ -1.11
USP39-206ENST00000448971 COX6CP09669 75 aa8.11□□□□□ -1.11
USP39-206ENST00000448971 IGFL1Q6UW32 110 aa8.11□□□□□ -1.11
USP39-206ENST00000448971 TCL1BO95988 128 aa8.09□□□□□ -1.11
USP39-206ENST00000448971 Q5XG85 94 aa8.09□□□□□ -1.11
USP39-206ENST00000448971 FABP2P12104 132 aa8.08□□□□□ -1.12
USP39-206ENST00000448971 M0R143 59 aa8.07□□□□□ -1.12
USP39-206ENST00000448971 NDUFV3P56181 108 aaKnown RBP8.07□□□□□ -1.12
USP39-206ENST00000448971 TRBV7-7A0A0K0K1E9 115 aa8.06□□□□□ -1.12
USP39-206ENST00000448971 ORMDL1Q9P0S3 153 aa8.05□□□□□ -1.12
USP39-206ENST00000448971 C9orf92A6NGG3 77 aa8.04□□□□□ -1.12
USP39-206ENST00000448971 TSTD3H0UI37 97 aa8.04□□□□□ -1.12
USP39-206ENST00000448971 SCGB1C2P0DMR2 95 aa8.04□□□□□ -1.12
USP39-206ENST00000448971 C1orf195Q5TG92 126 aa8.04□□□□□ -1.12
USP39-206ENST00000448971 H3BMG7 143 aa8.03□□□□□ -1.12
USP39-206ENST00000448971 KRTAP19-4Q3LI73 84 aa8.03□□□□□ -1.12
USP39-206ENST00000448971 A0A1B0GV72 72 aa8.01□□□□□ -1.13
USP39-206ENST00000448971 FSIP2Q5CZC0 6907 aa8□□□□□ -1.13
USP39-206ENST00000448971 LOC105371267A0A1B0GV96 52 aa8□□□□□ -1.13
USP39-206ENST00000448971 H3BQ85 93 aa8□□□□□ -1.13
USP39-206ENST00000448971 SEC61BP60468 96 aaKnown RBP8□□□□□ -1.13
USP39-206ENST00000448971 KRTAP4-1Q9BYQ7 146 aa8□□□□□ -1.13
USP39-206ENST00000448971 TRACP01848 142 aa7.99□□□□□ -1.13
USP39-206ENST00000448971 ASB16-AS1Q495Z4 193 aa7.99□□□□□ -1.13
USP39-206ENST00000448971 SS18L2Q9UHA2 77 aa7.99□□□□□ -1.13
USP39-206ENST00000448971 TMEM256-PLSCR3K7ERE1 68 aa7.98□□□□□ -1.13
USP39-206ENST00000448971 LST1O00453 97 aa7.98□□□□□ -1.13
USP39-206ENST00000448971 TEN1Q86WV5 123 aa7.98□□□□□ -1.13
USP39-206ENST00000448971 BATFQ16520 125 aa7.97□□□□□ -1.13
USP39-206ENST00000448971 Q6Q795 121 aa7.97□□□□□ -1.13
USP39-206ENST00000448971 CRCT1Q9UGL9 99 aa7.97□□□□□ -1.13
USP39-206ENST00000448971 A0A087WSZ3 146 aa7.96□□□□□ -1.14
USP39-206ENST00000448971 NAA38Q9BRA0 125 aaKnown RBP7.96□□□□□ -1.14
USP39-206ENST00000448971 ANKRD29Q8N6D5 301 aa7.94□□□□□ -1.14
USP39-206ENST00000448971 UBE2V1Q13404 147 aa7.92□□□□□ -1.14
USP39-206ENST00000448971 ATXN8Q156A1 80 aa7.92□□□□□ -1.14
USP39-206ENST00000448971 A0A1W2PNM2 257 aa7.91□□□□□ -1.14
USP39-206ENST00000448971 KRTAP23-1A1A580 65 aa7.91□□□□□ -1.14
USP39-206ENST00000448971 LYRM7Q5U5X0 104 aa7.91□□□□□ -1.14
USP39-206ENST00000448971 CCKP06307 115 aa7.88□□□□□ -1.15
USP39-206ENST00000448971 VPS25Q9BRG1 176 aa7.88□□□□□ -1.15
USP39-206ENST00000448971 KRTAP4-7Q9BYR0 210 aa7.88□□□□□ -1.15
USP39-206ENST00000448971 TRBV7-4A0A0J9YYF1 115 aa7.87□□□□□ -1.15
USP39-206ENST00000448971 BAALC-AS2P0C853 105 aa7.87□□□□□ -1.15
USP39-206ENST00000448971 PCOTHQ58A44 107 aa7.87□□□□□ -1.15
USP39-206ENST00000448971 LCE1DQ5T752 114 aa7.87□□□□□ -1.15
USP39-206ENST00000448971 RBM3P98179 157 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms