RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 SNHG12Q9BXW3 62 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 CCDC167Q9P0B6 97 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 GNG13Q9P2W3 67 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 CACFD1Q9UGQ2 172 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 ANK2Q01484 3957 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 SRCAPQ6ZRS2 3230 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 HFM1A2PYH4 1435 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 SPTBN1Q01082 2364 aaKnown RBP-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 CPSF1Q10570 1443 aaKnown RBP-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 EDC4Q6P2E9 1401 aaKnown RBP-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 ZNF518AQ6AHZ1 1483 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 AKAP13Q12802 2813 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 CRYBG1Q9Y4K1 1723 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 MUC22E2RYF6 1773 aaPredicted RBP-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 TCHHQ07283 1943 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 MYO15AQ9UKN7 3530 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 PDE4DIPQ5VU43 2346 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 TEX15Q9BXT5 2789 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 KALRNO60229 2985 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 CHD7Q9P2D1 2997 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 HYDINQ4G0P3 5121 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 PVALEFA0A1B0GWK0 134 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 UMAD1C9J7I0 102 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 ATOX1O00244 68 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 GNG7O60262 68 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 LINC00032P0C843 101 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 IGLC6P0CF74 106 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 AKAIN1P0CW23 69 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 ARPC4P59998 168 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 S100A10P60903 97 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 DR1Q01658 176 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 NREPQ16612 68 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 LINC01556Q5JQF7 62 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 MEIG1Q5JSS6 88 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 RPL13AP3Q6NVV1 102 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 GTF2H5Q6ZYL4 71 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 DEFB104AQ8WTQ1 72 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 CGREF1Q99674 301 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 AIF1LQ9BQI0 150 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 SPANXA1Q9NS26 97 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 LINC00474Q9P2X8 69 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 OVOS2A0A0J9YW53 1432 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 OVOS2Q6IE36 1432 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 ANKARQ7Z5J8 1434 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 CD163L1Q9NR16 1453 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 ARHGAP35Q9NRY4 1499 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 TULP4Q9NRJ4 1543 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 MAP3K4Q9Y6R4 1608 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 RYR2Q92736 4967 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 DDX60LQ5H9U9 1706 aaKnown RBP-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 NRAPQ86VF7 1730 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 CEP295Q9C0D2 2601 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 NBEAQ8NFP9 2946 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 CSMD3Q7Z407 3707 aa-0.25□□□□□ -2.45
PFDN4-202ENST00000441080 TLN2Q9Y4G6 2542 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 FOCADQ5VW36 1801 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 RGPD8O14715 1765 aaPredicted RBP-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 RGPD5Q99666 1765 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 QSER1Q2KHR3 1735 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 NALCNQ8IZF0 1738 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 DOT1LQ8TEK3 1739 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 ABCA3Q99758 1704 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 KIAA1551Q9HCM1 1747 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 ANKRD26Q9UPS8 1709 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 ITSN2Q9NZM3 1697 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 KIF21BO75037 1637 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 TARBP1Q13395 1621 aaKnown RBP-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 SCRIBQ14160 1630 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 CCDC180Q9P1Z9 1646 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 SMARCA2P51531 1590 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 MAST1Q9Y2H9 1570 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 MAPKBP1O60336 1514 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 CLASP1Q7Z460 1538 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 EHBP1L1Q8N3D4 1523 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 ADGRL2O95490 1459 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 RALGAPBQ86X10 1494 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 IFT140Q96RY7 1462 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 NAIPQ13075 1403 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 BSNQ9UPA5 3926 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 ETDCA0A1B0GVM5 59 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 CEBPZOSA8MTT3 80 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 LINC00694P0DN24 101 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 ATP5EP56381 51 aaPredicted RBP-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 ENHOQ6UWT2 76 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 ALKAL2Q6UX46 152 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 PYDC1Q8WXC3 89 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 S100ZQ8WXG8 99 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 LSM10Q969L4 123 aaKnown RBP-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 SPANXDQ9BXN6 97 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 PAIP2BQ9ULR5 123 aaKnown RBP-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 RELNP78509 3460 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 SPTAN1Q13813 2472 aaKnown RBP-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 BIRC6Q9NR09 4857 aa-0.26□□□□□ -2.45
PFDN4-202ENST00000441080 C5orf42Q9H799 3197 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 SPHKAPQ2M3C7 1700 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 UBR1Q8IWV7 1749 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 LRRIQ1Q96JM4 1722 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 TOPAZ1Q8N9V7 1692 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 PIK3C2BO00750 1634 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 DEPDC5O75140 1603 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms