RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 DNAH10OSP0CZ25 163 aa9.4□□□□□ -0.9
PCNX1-202ENST00000439984 C1orf134Q5TEV5 83 aa9.39□□□□□ -0.91
PCNX1-202ENST00000439984 CSAG1Q6PB30 78 aa9.39□□□□□ -0.91
PCNX1-202ENST00000439984 LINC01558Q9Y6Z2 57 aa9.39□□□□□ -0.91
PCNX1-202ENST00000439984 DMXL1Q9Y485 3027 aa9.38□□□□□ -0.91
PCNX1-202ENST00000439984 RTL8CO15255 209 aa9.36□□□□□ -0.91
PCNX1-202ENST00000439984 CFAP47Q6ZTR5 3102 aa9.36□□□□□ -0.91
PCNX1-202ENST00000439984 SPRR4Q96PI1 79 aa9.35□□□□□ -0.91
PCNX1-202ENST00000439984 C19orf73Q9NVV2 129 aa9.35□□□□□ -0.91
PCNX1-202ENST00000439984 CNBPP62633 177 aaKnown RBP9.35□□□□□ -0.91
PCNX1-202ENST00000439984 Q8N1X5 172 aa9.35□□□□□ -0.91
PCNX1-202ENST00000439984 CASC10Q5T4H9 136 aa9.34□□□□□ -0.91
PCNX1-202ENST00000439984 TACC2O95359 2948 aa9.34□□□□□ -0.91
PCNX1-202ENST00000439984 WDFY3Q8IZQ1 3526 aa9.34□□□□□ -0.91
PCNX1-202ENST00000439984 PLA2G2DQ9UNK4 145 aa9.34□□□□□ -0.91
PCNX1-202ENST00000439984 A0A0D9SG42 100 aa9.33□□□□□ -0.92
PCNX1-202ENST00000439984 LINC00612Q8N6U2 182 aa9.33□□□□□ -0.92
PCNX1-202ENST00000439984 KRTAP1-3Q8IUG1 177 aa9.33□□□□□ -0.92
PCNX1-202ENST00000439984 TLX1NBP0CAT3 122 aa9.32□□□□□ -0.92
PCNX1-202ENST00000439984 TYMSOSQ8TAI1 123 aa9.3□□□□□ -0.92
PCNX1-202ENST00000439984 HRES1P13985 223 aa9.3□□□□□ -0.92
PCNX1-202ENST00000439984 ATRQ13535 2644 aa9.29□□□□□ -0.92
PCNX1-202ENST00000439984 KRTAP10-3P60369 221 aa9.28□□□□□ -0.92
PCNX1-202ENST00000439984 USP24Q9UPU5 2620 aa9.28□□□□□ -0.92
PCNX1-202ENST00000439984 COL12A1Q99715 3063 aa9.28□□□□□ -0.92
PCNX1-202ENST00000439984 IGSF10Q6WRI0 2623 aa9.27□□□□□ -0.93
PCNX1-202ENST00000439984 HELZ2Q9BYK8 2649 aaKnown RBP9.26□□□□□ -0.93
PCNX1-202ENST00000439984 ZZEF1O43149 2961 aa9.25□□□□□ -0.93
PCNX1-202ENST00000439984 NBDYA0A0U1RRE5 68 aa9.25□□□□□ -0.93
PCNX1-202ENST00000439984 CHD6Q8TD26 2715 aa9.24□□□□□ -0.93
PCNX1-202ENST00000439984 KRTAP24-1Q3LI83 254 aa9.22□□□□□ -0.93
PCNX1-202ENST00000439984 KRTAP1-1Q07627 177 aa9.22□□□□□ -0.93
PCNX1-202ENST00000439984 FLNCQ14315 2725 aa9.22□□□□□ -0.93
PCNX1-202ENST00000439984 MMP24-AS1A0A0U1RRL7 71 aa9.21□□□□□ -0.93
PCNX1-202ENST00000439984 C9orf92A6NGG3 77 aa9.21□□□□□ -0.94
PCNX1-202ENST00000439984 TEX15Q9BXT5 2789 aa9.21□□□□□ -0.94
PCNX1-202ENST00000439984 ZNF861PO60384 105 aa9.19□□□□□ -0.94
PCNX1-202ENST00000439984 IGLV5-37A0A075B6J1 123 aa9.17□□□□□ -0.94
PCNX1-202ENST00000439984 MUC3AQ02505 3323 aa9.17□□□□□ -0.94
PCNX1-202ENST00000439984 DMDP11532 3685 aa9.17□□□□□ -0.94
PCNX1-202ENST00000439984 A8MU10 97 aa9.16□□□□□ -0.94
PCNX1-202ENST00000439984 A0A1B0GU33 70 aa9.14□□□□□ -0.95
PCNX1-202ENST00000439984 MGAM2Q2M2H8 2515 aa9.14□□□□□ -0.95
PCNX1-202ENST00000439984 ASPMQ8IZT6 3477 aa9.14□□□□□ -0.95
PCNX1-202ENST00000439984 PSORS1C2Q9UIG4 136 aa9.12□□□□□ -0.95
PCNX1-202ENST00000439984 KRTAP10-11P60412 298 aa9.12□□□□□ -0.95
PCNX1-202ENST00000439984 GCN1Q92616 2671 aaKnown RBP9.11□□□□□ -0.95
PCNX1-202ENST00000439984 MAST4O15021 2626 aa9.1□□□□□ -0.95
PCNX1-202ENST00000439984 ITPR1Q14643 2758 aa9.09□□□□□ -0.95
PCNX1-202ENST00000439984 A6NN06 94 aa9.08□□□□□ -0.96
PCNX1-202ENST00000439984 NBEAL2Q6ZNJ1 2754 aa9.06□□□□□ -0.96
PCNX1-202ENST00000439984 LAMA5O15230 3695 aa9.05□□□□□ -0.96
PCNX1-202ENST00000439984 LINC00472Q9H8W2 130 aa9.05□□□□□ -0.96
PCNX1-202ENST00000439984 ZFHX4Q86UP3 3567 aa9.05□□□□□ -0.96
PCNX1-202ENST00000439984 LUZP6Q538Z0 58 aa9.04□□□□□ -0.96
PCNX1-202ENST00000439984 ZCCHC13Q8WW36 166 aaKnown RBP9.04□□□□□ -0.96
PCNX1-202ENST00000439984 ADM2Q7Z4H4 148 aa9.03□□□□□ -0.96
PCNX1-202ENST00000439984 IGLV7-43P04211 117 aa9.02□□□□□ -0.96
PCNX1-202ENST00000439984 DCHS1Q96JQ0 3298 aa9.02□□□□□ -0.97
PCNX1-202ENST00000439984 SETXQ7Z333 2677 aaKnown RBP9.02□□□□□ -0.97
PCNX1-202ENST00000439984 SPRR1AP35321 89 aa9.02□□□□□ -0.97
PCNX1-202ENST00000439984 HRNRQ86YZ3 2850 aaPredicted RBP9.01□□□□□ -0.97
PCNX1-202ENST00000439984 TEP1Q99973 2627 aaKnown RBP9.01□□□□□ -0.97
PCNX1-202ENST00000439984 UTP20O75691 2785 aaKnown RBP9□□□□□ -0.97
PCNX1-202ENST00000439984 RELNP78509 3460 aa9□□□□□ -0.97
PCNX1-202ENST00000439984 LINC00304Q8N9R0 145 aa9□□□□□ -0.97
PCNX1-202ENST00000439984 UNC79Q9P2D8 2635 aa8.99□□□□□ -0.97
PCNX1-202ENST00000439984 Q5W150 140 aa8.99□□□□□ -0.97
PCNX1-202ENST00000439984 K7EIL1 84 aa8.99□□□□□ -0.97
PCNX1-202ENST00000439984 A0A087WTM6 91 aa8.97□□□□□ -0.97
PCNX1-202ENST00000439984 ZANQ9Y493 2812 aa8.97□□□□□ -0.97
PCNX1-202ENST00000439984 DMAC1Q96GE9 116 aa8.96□□□□□ -0.98
PCNX1-202ENST00000439984 UBR5O95071 2799 aaPredicted RBP8.94□□□□□ -0.98
PCNX1-202ENST00000439984 TNP2Q05952 138 aa8.93□□□□□ -0.98
PCNX1-202ENST00000439984 KRTAP26-1Q6PEX3 210 aa8.91□□□□□ -0.98
PCNX1-202ENST00000439984 KRTAP29-1A8MX34 341 aaPredicted RBP8.91□□□□□ -0.98
PCNX1-202ENST00000439984 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.9□□□□□ -0.98
PCNX1-202ENST00000439984 ASH1LQ9NR48 2969 aaKnown RBP8.89□□□□□ -0.99
PCNX1-202ENST00000439984 CRYBG3Q68DQ2 2970 aa8.88□□□□□ -0.99
PCNX1-202ENST00000439984 NOTCH1P46531 2555 aa8.87□□□□□ -0.99
PCNX1-202ENST00000439984 ASB16-AS1Q495Z4 193 aa8.86□□□□□ -0.99
PCNX1-202ENST00000439984 ITPR2Q14571 2701 aa8.83□□□□□ -1
PCNX1-202ENST00000439984 Q6ZR54 194 aa8.83□□□□□ -1
PCNX1-202ENST00000439984 DCHS2Q6V1P9 2916 aa8.83□□□□□ -1
PCNX1-202ENST00000439984 COL6A5A8TX70 2615 aa8.83□□□□□ -1
PCNX1-202ENST00000439984 ROMO1P60602 79 aa8.83□□□□□ -1
PCNX1-202ENST00000439984 SMR3BP02814 79 aaPredicted RBP8.82□□□□□ -1
PCNX1-202ENST00000439984 SPATA8Q6RVD6 105 aa8.82□□□□□ -1
PCNX1-202ENST00000439984 A0A0A0MQY5 61 aa8.82□□□□□ -1
PCNX1-202ENST00000439984 SMG1Q96Q15 3661 aaKnown RBP8.81□□□□□ -1
PCNX1-202ENST00000439984 SPRR1BP22528 89 aa8.81□□□□□ -1
PCNX1-202ENST00000439984 LCE6AA0A183 80 aa8.81□□□□□ -1
PCNX1-202ENST00000439984 APCP25054 2843 aa8.79□□□□□ -1
PCNX1-202ENST00000439984 KRTAP16-1A8MUX0 517 aa8.78□□□□□ -1
PCNX1-202ENST00000439984 STAB1Q9NY15 2570 aa8.78□□□□□ -1
PCNX1-202ENST00000439984 KRTAP4-16G5E9R7 235 aaPredicted RBP8.77□□□□□ -1.01
PCNX1-202ENST00000439984 KRTAP25-1Q3LHN0 102 aa8.76□□□□□ -1.01
PCNX1-202ENST00000439984 FBN2P35556 2912 aa8.76□□□□□ -1.01
PCNX1-202ENST00000439984 H1FX-AS1Q4G0G2 97 aa8.74□□□□□ -1.01
PCNX1-202ENST00000439984 CSMD1Q96PZ7 3565 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms