RNA–Protein interactions for RNA: ENST00000439673.6

TSC2-207, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,287 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-207ENST00000439673 Q5VV11 94 aa9.98□□□□□ -0.81
TSC2-207ENST00000439673 Q5W150 140 aa9.95□□□□□ -0.82
TSC2-207ENST00000439673 DMAC1Q96GE9 116 aa9.95□□□□□ -0.82
TSC2-207ENST00000439673 CHD6Q8TD26 2715 aa9.93□□□□□ -0.82
TSC2-207ENST00000439673 CHD9Q3L8U1 2897 aa9.91□□□□□ -0.82
TSC2-207ENST00000439673 KRTAP26-1Q6PEX3 210 aa9.91□□□□□ -0.82
TSC2-207ENST00000439673 CAMK2N1Q7Z7J9 78 aa9.9□□□□□ -0.82
TSC2-207ENST00000439673 C5orf42Q9H799 3197 aa9.88□□□□□ -0.83
TSC2-207ENST00000439673 SPINK7P58062 85 aa9.87□□□□□ -0.83
TSC2-207ENST00000439673 NBEAL1Q6ZS30 2694 aa9.87□□□□□ -0.83
TSC2-207ENST00000439673 CSAG1Q6PB30 78 aa9.86□□□□□ -0.83
TSC2-207ENST00000439673 PRAC1Q96KF2 57 aa9.86□□□□□ -0.83
TSC2-207ENST00000439673 FLG2Q5D862 2391 aaPredicted RBP9.85□□□□□ -0.83
TSC2-207ENST00000439673 RANBP2P49792 3224 aaKnown RBP9.85□□□□□ -0.83
TSC2-207ENST00000439673 OXTP01178 125 aa9.84□□□□□ -0.83
TSC2-207ENST00000439673 MKI67P46013 3256 aaKnown RBP9.84□□□□□ -0.83
TSC2-207ENST00000439673 BRCA2P51587 3418 aa9.82□□□□□ -0.84
TSC2-207ENST00000439673 LINC00483Q53H64 154 aa9.81□□□□□ -0.84
TSC2-207ENST00000439673 S4R3F8 94 aa9.81□□□□□ -0.84
TSC2-207ENST00000439673 KRTAP1-5Q9BYS1 174 aa9.8□□□□□ -0.84
TSC2-207ENST00000439673 UNC79Q9P2D8 2635 aa9.79□□□□□ -0.84
TSC2-207ENST00000439673 TEX15Q9BXT5 2789 aa9.77□□□□□ -0.84
TSC2-207ENST00000439673 TEP1Q99973 2627 aaKnown RBP9.76□□□□□ -0.85
TSC2-207ENST00000439673 GCN1Q92616 2671 aaKnown RBP9.76□□□□□ -0.85
TSC2-207ENST00000439673 NOTCH1P46531 2555 aa9.76□□□□□ -0.85
TSC2-207ENST00000439673 KRTAP4-16G5E9R7 235 aaPredicted RBP9.76□□□□□ -0.85
TSC2-207ENST00000439673 TRANK1O15050 2925 aa9.75□□□□□ -0.85
TSC2-207ENST00000439673 Q6ZR54 194 aa9.75□□□□□ -0.85
TSC2-207ENST00000439673 LAMA3Q16787 3333 aa9.74□□□□□ -0.85
TSC2-207ENST00000439673 KRTAP29-1A8MX34 341 aaPredicted RBP9.72□□□□□ -0.85
TSC2-207ENST00000439673 RPL37P61927 97 aaKnown RBP9.69□□□□□ -0.86
TSC2-207ENST00000439673 R4GN34 69 aa9.67□□□□□ -0.86
TSC2-207ENST00000439673 ASB16-AS1Q495Z4 193 aa9.66□□□□□ -0.86
TSC2-207ENST00000439673 CFAP54Q96N23 3096 aa9.66□□□□□ -0.86
TSC2-207ENST00000439673 COL6A5A8TX70 2615 aa9.65□□□□□ -0.86
TSC2-207ENST00000439673 H3BS24 57 aa9.65□□□□□ -0.86
TSC2-207ENST00000439673 DMBT1Q9UGM3 2413 aaPredicted RBP9.64□□□□□ -0.87
TSC2-207ENST00000439673 ZNF292O60281 2723 aa9.64□□□□□ -0.87
TSC2-207ENST00000439673 ROMO1P60602 79 aa9.63□□□□□ -0.87
TSC2-207ENST00000439673 MGAQ8IWI9 3026 aa9.63□□□□□ -0.87
TSC2-207ENST00000439673 H1FX-AS1Q4G0G2 97 aa9.62□□□□□ -0.87
TSC2-207ENST00000439673 M0R2T5 61 aa9.61□□□□□ -0.87
TSC2-207ENST00000439673 A0A0A0MQY5 61 aa9.6□□□□□ -0.87
TSC2-207ENST00000439673 KRTAP10-1P60331 282 aa9.59□□□□□ -0.87
TSC2-207ENST00000439673 SEC61BP60468 96 aaKnown RBP9.58□□□□□ -0.88
TSC2-207ENST00000439673 LAMA2P24043 3122 aaKnown RBP9.57□□□□□ -0.88
TSC2-207ENST00000439673 A0A0C4DFX4 3053 aa9.57□□□□□ -0.88
TSC2-207ENST00000439673 SETXQ7Z333 2677 aaKnown RBP9.57□□□□□ -0.88
TSC2-207ENST00000439673 PANO1I0J062 215 aa9.54□□□□□ -0.88
TSC2-207ENST00000439673 KRTAP10-2P60368 255 aa9.54□□□□□ -0.88
TSC2-207ENST00000439673 NBEAL2Q6ZNJ1 2754 aa9.53□□□□□ -0.88
TSC2-207ENST00000439673 SPATA8Q6RVD6 105 aa9.5□□□□□ -0.89
TSC2-207ENST00000439673 UNC80Q8N2C7 3258 aa9.49□□□□□ -0.89
TSC2-207ENST00000439673 Q5VSD8 79 aa9.48□□□□□ -0.89
TSC2-207ENST00000439673 STAB2Q8WWQ8 2551 aa9.48□□□□□ -0.89
TSC2-207ENST00000439673 LCE6AA0A183 80 aa9.48□□□□□ -0.89
TSC2-207ENST00000439673 PRUNE2Q8WUY3 3088 aa9.48□□□□□ -0.89
TSC2-207ENST00000439673 CDH23Q9H251 3354 aa9.48□□□□□ -0.89
TSC2-207ENST00000439673 M0QZ58 72 aa9.47□□□□□ -0.89
TSC2-207ENST00000439673 UBR5O95071 2799 aaPredicted RBP9.46□□□□□ -0.9
TSC2-207ENST00000439673 A0A087X002 238 aa9.45□□□□□ -0.9
TSC2-207ENST00000439673 NOTCH2NLQ7Z3S9 236 aa9.44□□□□□ -0.9
TSC2-207ENST00000439673 MAP1AP78559 2803 aaPredicted RBP9.42□□□□□ -0.9
TSC2-207ENST00000439673 ADM2Q7Z4H4 148 aa9.37□□□□□ -0.91
TSC2-207ENST00000439673 RPS29P62273 56 aaKnown RBP9.37□□□□□ -0.91
TSC2-207ENST00000439673 NSD1Q96L73 2696 aaPredicted RBP9.37□□□□□ -0.91
TSC2-207ENST00000439673 A6NN06 94 aa9.36□□□□□ -0.91
TSC2-207ENST00000439673 KRTAP11-1Q8IUC1 163 aa9.35□□□□□ -0.91
TSC2-207ENST00000439673 WDFY4Q6ZS81 3184 aa9.34□□□□□ -0.91
TSC2-207ENST00000439673 DSPP15924 2871 aaKnown RBP9.34□□□□□ -0.92
TSC2-207ENST00000439673 KRTAP7-1Q8IUC3 87 aa9.33□□□□□ -0.92
TSC2-207ENST00000439673 IGSF10Q6WRI0 2623 aa9.33□□□□□ -0.92
TSC2-207ENST00000439673 TRIOO75962 3097 aa9.33□□□□□ -0.92
TSC2-207ENST00000439673 Q6ZRN7 208 aaPredicted RBP9.31□□□□□ -0.92
TSC2-207ENST00000439673 SZT2Q5T011 3432 aa9.3□□□□□ -0.92
TSC2-207ENST00000439673 TNRC18O15417 2968 aaPredicted RBP9.3□□□□□ -0.92
TSC2-207ENST00000439673 KRTAP13-1Q8IUC0 172 aa9.27□□□□□ -0.93
TSC2-207ENST00000439673 KRTAP25-1Q3LHN0 102 aa9.26□□□□□ -0.93
TSC2-207ENST00000439673 FRYQ5TBA9 3013 aa9.25□□□□□ -0.93
TSC2-207ENST00000439673 BAHCC1Q9P281 2608 aa9.23□□□□□ -0.93
TSC2-207ENST00000439673 XIRP2A4UGR9 3374 aa9.21□□□□□ -0.93
TSC2-207ENST00000439673 PLAC4Q8WY50 150 aa9.21□□□□□ -0.93
TSC2-207ENST00000439673 ITPR2Q14571 2701 aa9.21□□□□□ -0.94
TSC2-207ENST00000439673 ITPR1Q14643 2758 aa9.2□□□□□ -0.94
TSC2-207ENST00000439673 A8MU10 97 aa9.18□□□□□ -0.94
TSC2-207ENST00000439673 KRTAP13-2Q52LG2 175 aa9.18□□□□□ -0.94
TSC2-207ENST00000439673 VPS13AQ96RL7 3174 aa9.11□□□□□ -0.95
TSC2-207ENST00000439673 KRTAP16-1A8MUX0 517 aa9.11□□□□□ -0.95
TSC2-207ENST00000439673 A8MUU9 505 aa9.11□□□□□ -0.95
TSC2-207ENST00000439673 LAMA1P25391 3075 aa9.08□□□□□ -0.96
TSC2-207ENST00000439673 DNAH14Q0VDD8 3507 aa9.06□□□□□ -0.96
TSC2-207ENST00000439673 KALRNO60229 2985 aa9.05□□□□□ -0.96
TSC2-207ENST00000439673 FLNCQ14315 2725 aa9.04□□□□□ -0.96
TSC2-207ENST00000439673 APCP25054 2843 aa9.04□□□□□ -0.96
TSC2-207ENST00000439673 KMT2BQ9UMN6 2715 aaPredicted RBP9.04□□□□□ -0.96
TSC2-207ENST00000439673 SPTBN5Q9NRC6 3674 aaKnown RBP9.03□□□□□ -0.96
TSC2-207ENST00000439673 VCANP13611 3396 aa9.03□□□□□ -0.96
TSC2-207ENST00000439673 UTP20O75691 2785 aaKnown RBP9□□□□□ -0.97
TSC2-207ENST00000439673 TACC2O95359 2948 aa9□□□□□ -0.97
TSC2-207ENST00000439673 FREM2Q5SZK8 3169 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms