RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 LCE6AA0A183 80 aa8.52□□□□□ -1.05
ACTN1-204ENST00000438964 KMT2BQ9UMN6 2715 aaPredicted RBP8.52□□□□□ -1.05
ACTN1-204ENST00000438964 KRTAP4-16G5E9R7 235 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-204ENST00000438964 IGFL1Q6UW32 110 aa8.51□□□□□ -1.05
ACTN1-204ENST00000438964 PRR15LQ9BU68 103 aa8.51□□□□□ -1.05
ACTN1-204ENST00000438964 Q5VV11 94 aa8.5□□□□□ -1.05
ACTN1-204ENST00000438964 INAFM1C9JVW0 142 aa8.49□□□□□ -1.05
ACTN1-204ENST00000438964 SPRR4Q96PI1 79 aa8.49□□□□□ -1.05
ACTN1-204ENST00000438964 B9D2Q9BPU9 175 aa8.49□□□□□ -1.05
ACTN1-204ENST00000438964 MP68P56378 58 aa8.49□□□□□ -1.05
ACTN1-204ENST00000438964 MRPL55Q7Z7F7 128 aaKnown RBP8.48□□□□□ -1.05
ACTN1-204ENST00000438964 H0Y9P7 68 aa8.47□□□□□ -1.05
ACTN1-204ENST00000438964 DEFB131BA0A096LNP1 70 aa8.47□□□□□ -1.05
ACTN1-204ENST00000438964 PCOTHQ58A44 107 aa8.46□□□□□ -1.06
ACTN1-204ENST00000438964 C16orf90A8MZG2 172 aa8.44□□□□□ -1.06
ACTN1-204ENST00000438964 REG3GQ6UW15 175 aa8.43□□□□□ -1.06
ACTN1-204ENST00000438964 CYP4F30PQ9H0H9 118 aa8.43□□□□□ -1.06
ACTN1-204ENST00000438964 J3QKU1 62 aa8.43□□□□□ -1.06
ACTN1-204ENST00000438964 SPRR1AP35321 89 aa8.43□□□□□ -1.06
ACTN1-204ENST00000438964 CASC2Q6XLA1 102 aa8.43□□□□□ -1.06
ACTN1-204ENST00000438964 LINC01556Q5JQF7 62 aa8.42□□□□□ -1.06
ACTN1-204ENST00000438964 Q8N9P0 234 aaPredicted RBP8.42□□□□□ -1.06
ACTN1-204ENST00000438964 STAB2Q8WWQ8 2551 aa8.42□□□□□ -1.06
ACTN1-204ENST00000438964 H0Y9J4 135 aa8.41□□□□□ -1.06
ACTN1-204ENST00000438964 A6NED7 52 aa8.4□□□□□ -1.06
ACTN1-204ENST00000438964 KRTAP10-11P60412 298 aa8.4□□□□□ -1.06
ACTN1-204ENST00000438964 UBE2AP49459 152 aa8.39□□□□□ -1.07
ACTN1-204ENST00000438964 CNBPP62633 177 aaKnown RBP8.39□□□□□ -1.07
ACTN1-204ENST00000438964 NDUFB1O75438 58 aa8.38□□□□□ -1.07
ACTN1-204ENST00000438964 LCA10Q71F78 164 aa8.38□□□□□ -1.07
ACTN1-204ENST00000438964 C11orf45Q8TAV5 145 aa8.38□□□□□ -1.07
ACTN1-204ENST00000438964 CHTF8P0CG12 524 aa8.38□□□□□ -1.07
ACTN1-204ENST00000438964 KRTAP11-1Q8IUC1 163 aa8.37□□□□□ -1.07
ACTN1-204ENST00000438964 SPAG11AQ6PDA7 123 aa8.37□□□□□ -1.07
ACTN1-204ENST00000438964 LINC00588Q9Y4M8 146 aa8.37□□□□□ -1.07
ACTN1-204ENST00000438964 MGAM2Q2M2H8 2515 aa8.36□□□□□ -1.07
ACTN1-204ENST00000438964 KRTAP29-1A8MX34 341 aaPredicted RBP8.35□□□□□ -1.07
ACTN1-204ENST00000438964 COA5Q86WW8 74 aa8.35□□□□□ -1.07
ACTN1-204ENST00000438964 A0A1B0GW54 56 aa8.33□□□□□ -1.08
ACTN1-204ENST00000438964 PHF5AQ7RTV0 110 aaKnown RBP8.33□□□□□ -1.08
ACTN1-204ENST00000438964 TLX1NBP0CAT3 122 aa8.33□□□□□ -1.08
ACTN1-204ENST00000438964 DNAH9Q9NYC9 4486 aa8.31□□□□□ -1.08
ACTN1-204ENST00000438964 DNAH10OSP0CZ25 163 aa8.31□□□□□ -1.08
ACTN1-204ENST00000438964 PLA2G2DQ9UNK4 145 aa8.31□□□□□ -1.08
ACTN1-204ENST00000438964 DNAH1Q9P2D7 4330 aa8.31□□□□□ -1.08
ACTN1-204ENST00000438964 NDUFS5O43920 106 aa8.3□□□□□ -1.08
ACTN1-204ENST00000438964 H3BNG1 76 aa8.3□□□□□ -1.08
ACTN1-204ENST00000438964 RBM12B-AS1Q9P1G2 102 aa8.29□□□□□ -1.08
ACTN1-204ENST00000438964 IGLV5-37A0A075B6J1 123 aa8.29□□□□□ -1.08
ACTN1-204ENST00000438964 LIMD2Q9BT23 127 aa8.29□□□□□ -1.08
ACTN1-204ENST00000438964 IGLV9-49A0A0B4J1Y8 123 aa8.27□□□□□ -1.08
ACTN1-204ENST00000438964 CD164Q04900 197 aa8.27□□□□□ -1.09
ACTN1-204ENST00000438964 C9orf163Q8N9P6 203 aa8.27□□□□□ -1.09
ACTN1-204ENST00000438964 A8MWP4 228 aa8.27□□□□□ -1.09
ACTN1-204ENST00000438964 KTN1-AS1Q86SY8 53 aa8.26□□□□□ -1.09
ACTN1-204ENST00000438964 SPINK7P58062 85 aa8.25□□□□□ -1.09
ACTN1-204ENST00000438964 LINC00472Q9H8W2 130 aa8.25□□□□□ -1.09
ACTN1-204ENST00000438964 KRTAP1-5Q9BYS1 174 aa8.24□□□□□ -1.09
ACTN1-204ENST00000438964 DNAH7Q8WXX0 4024 aa8.24□□□□□ -1.09
ACTN1-204ENST00000438964 MMP24-AS1A0A0U1RRL7 71 aa8.24□□□□□ -1.09
ACTN1-204ENST00000438964 SPANXA2-OT1Q8N9U9 137 aa8.24□□□□□ -1.09
ACTN1-204ENST00000438964 CMYA5Q8N3K9 4069 aa8.23□□□□□ -1.09
ACTN1-204ENST00000438964 IGHV6-1A0A0B4J1U7 121 aa8.22□□□□□ -1.09
ACTN1-204ENST00000438964 K7EIL1 84 aa8.22□□□□□ -1.09
ACTN1-204ENST00000438964 FRAS1Q86XX4 4008 aa8.2□□□□□ -1.1
ACTN1-204ENST00000438964 Q75L30 129 aa8.2□□□□□ -1.1
ACTN1-204ENST00000438964 ANAPC11Q9NYG5 84 aa8.2□□□□□ -1.1
ACTN1-204ENST00000438964 LOC101927531A0A1B0GV80 90 aa8.19□□□□□ -1.1
ACTN1-204ENST00000438964 MOBPQ13875 183 aa8.19□□□□□ -1.1
ACTN1-204ENST00000438964 PRR26Q8N8Z3 221 aa8.19□□□□□ -1.1
ACTN1-204ENST00000438964 IGLV7-46A0A075B6I9 117 aa8.18□□□□□ -1.1
ACTN1-204ENST00000438964 A0A087X002 238 aa8.18□□□□□ -1.1
ACTN1-204ENST00000438964 A6NN06 94 aa8.18□□□□□ -1.1
ACTN1-204ENST00000438964 ATP11AUNQ6ZP68 121 aa8.18□□□□□ -1.1
ACTN1-204ENST00000438964 NOTCH2NLQ7Z3S9 236 aa8.18□□□□□ -1.1
ACTN1-204ENST00000438964 PANO1I0J062 215 aa8.18□□□□□ -1.1
ACTN1-204ENST00000438964 IGLV8-61A0A075B6I0 122 aa8.17□□□□□ -1.1
ACTN1-204ENST00000438964 PRAC1Q96KF2 57 aa8.16□□□□□ -1.1
ACTN1-204ENST00000438964 HUWE1Q7Z6Z7 4374 aaKnown RBP8.16□□□□□ -1.1
ACTN1-204ENST00000438964 HRES1P13985 223 aa8.15□□□□□ -1.1
ACTN1-204ENST00000438964 CDC42SE1Q9NRR8 79 aa8.14□□□□□ -1.11
ACTN1-204ENST00000438964 H3BPC8 53 aa8.13□□□□□ -1.11
ACTN1-204ENST00000438964 SPINK6Q6UWN8 80 aa8.13□□□□□ -1.11
ACTN1-204ENST00000438964 ADM2Q7Z4H4 148 aa8.12□□□□□ -1.11
ACTN1-204ENST00000438964 RETNLBQ9BQ08 111 aa8.11□□□□□ -1.11
ACTN1-204ENST00000438964 Q96NJ1 140 aa8.1□□□□□ -1.11
ACTN1-204ENST00000438964 C8orf17Q9NRJ1 99 aa8.1□□□□□ -1.11
ACTN1-204ENST00000438964 LINC01558Q9Y6Z2 57 aa8.08□□□□□ -1.12
ACTN1-204ENST00000438964 UBE2DNLQ8IWF7 75 aa8.07□□□□□ -1.12
ACTN1-204ENST00000438964 C7orf65Q6ZTY9 151 aa8.06□□□□□ -1.12
ACTN1-204ENST00000438964 Q5W150 140 aa8.05□□□□□ -1.12
ACTN1-204ENST00000438964 CDK2AP2O75956 126 aa8.03□□□□□ -1.12
ACTN1-204ENST00000438964 TGP01266 2768 aa8.03□□□□□ -1.12
ACTN1-204ENST00000438964 SPRR1BP22528 89 aa8.03□□□□□ -1.12
ACTN1-204ENST00000438964 LINC00313P59037 77 aa8.03□□□□□ -1.12
ACTN1-204ENST00000438964 KRTAP24-1Q3LI83 254 aa8.02□□□□□ -1.13
ACTN1-204ENST00000438964 DNAH3Q8TD57 4116 aa8.01□□□□□ -1.13
ACTN1-204ENST00000438964 A0A1B0GVX0 72 aa8.01□□□□□ -1.13
ACTN1-204ENST00000438964 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.01□□□□□ -1.13
ACTN1-204ENST00000438964 PLECQ15149 4684 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms