RNA–Protein interactions for RNA: ENST00000438097.6

UBE3A-204, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 8,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-204ENST00000438097 CASC10Q5T4H9 136 aa8.87□□□□□ -0.99
UBE3A-204ENST00000438097 ZCCHC13Q8WW36 166 aaKnown RBP8.85□□□□□ -0.99
UBE3A-204ENST00000438097 PCNTO95613 3336 aa8.85□□□□□ -0.99
UBE3A-204ENST00000438097 C5orf42Q9H799 3197 aa8.85□□□□□ -0.99
UBE3A-204ENST00000438097 OCR1Q9BZK8 76 aa8.84□□□□□ -0.99
UBE3A-204ENST00000438097 A0A1W2PNM2 257 aa8.82□□□□□ -1
UBE3A-204ENST00000438097 PLAC4Q8WY50 150 aa8.8□□□□□ -1
UBE3A-204ENST00000438097 A0A0G2JQZ4 141 aa8.79□□□□□ -1
UBE3A-204ENST00000438097 A0A096LNT2 108 aa8.78□□□□□ -1
UBE3A-204ENST00000438097 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.77□□□□□ -1.01
UBE3A-204ENST00000438097 IGSF10Q6WRI0 2623 aa8.75□□□□□ -1.01
UBE3A-204ENST00000438097 PLAC8Q9NZF1 115 aa8.75□□□□□ -1.01
UBE3A-204ENST00000438097 NSD1Q96L73 2696 aaPredicted RBP8.73□□□□□ -1.01
UBE3A-204ENST00000438097 KRTAP10-3P60369 221 aa8.73□□□□□ -1.01
UBE3A-204ENST00000438097 UTRNP46939 3433 aa8.73□□□□□ -1.01
UBE3A-204ENST00000438097 SPINK7P58062 85 aa8.72□□□□□ -1.01
UBE3A-204ENST00000438097 CFAP54Q96N23 3096 aa8.71□□□□□ -1.02
UBE3A-204ENST00000438097 EIF4EBP3O60516 100 aaPredicted RBP8.7□□□□□ -1.02
UBE3A-204ENST00000438097 OXTP01178 125 aa8.68□□□□□ -1.02
UBE3A-204ENST00000438097 ROMO1P60602 79 aa8.67□□□□□ -1.02
UBE3A-204ENST00000438097 FP248Q71RG6 208 aaPredicted RBP8.67□□□□□ -1.02
UBE3A-204ENST00000438097 LINC01558Q9Y6Z2 57 aa8.66□□□□□ -1.02
UBE3A-204ENST00000438097 WIPF1O43516 503 aa8.66□□□□□ -1.02
UBE3A-204ENST00000438097 UTP20O75691 2785 aaKnown RBP8.65□□□□□ -1.02
UBE3A-204ENST00000438097 H1FX-AS1Q4G0G2 97 aa8.64□□□□□ -1.03
UBE3A-204ENST00000438097 RPL37P61927 97 aaKnown RBP8.64□□□□□ -1.03
UBE3A-204ENST00000438097 Q8N9P0 234 aaPredicted RBP8.62□□□□□ -1.03
UBE3A-204ENST00000438097 Q5VSD8 79 aa8.62□□□□□ -1.03
UBE3A-204ENST00000438097 Q5W150 140 aa8.61□□□□□ -1.03
UBE3A-204ENST00000438097 LAMA2P24043 3122 aaKnown RBP8.61□□□□□ -1.03
UBE3A-204ENST00000438097 M0QZ58 72 aa8.6□□□□□ -1.03
UBE3A-204ENST00000438097 A0A0C4DFX4 3053 aa8.59□□□□□ -1.03
UBE3A-204ENST00000438097 MMP24-AS1A0A0U1RRL7 71 aa8.59□□□□□ -1.03
UBE3A-204ENST00000438097 ASB16-AS1Q495Z4 193 aa8.58□□□□□ -1.04
UBE3A-204ENST00000438097 NBEAL2Q6ZNJ1 2754 aa8.56□□□□□ -1.04
UBE3A-204ENST00000438097 KRTAP1-3Q8IUG1 177 aa8.54□□□□□ -1.04
UBE3A-204ENST00000438097 SPRR1AP35321 89 aa8.52□□□□□ -1.05
UBE3A-204ENST00000438097 LINC00472Q9H8W2 130 aa8.51□□□□□ -1.05
UBE3A-204ENST00000438097 SPRR1BP22528 89 aa8.5□□□□□ -1.05
UBE3A-204ENST00000438097 REV3LO60673 3130 aa8.5□□□□□ -1.05
UBE3A-204ENST00000438097 H3BS24 57 aa8.49□□□□□ -1.05
UBE3A-204ENST00000438097 MGAQ8IWI9 3026 aa8.48□□□□□ -1.05
UBE3A-204ENST00000438097 KRTAP1-1Q07627 177 aa8.48□□□□□ -1.05
UBE3A-204ENST00000438097 TRANK1O15050 2925 aa8.46□□□□□ -1.06
UBE3A-204ENST00000438097 Q5VV11 94 aa8.45□□□□□ -1.06
UBE3A-204ENST00000438097 ADM2Q7Z4H4 148 aa8.44□□□□□ -1.06
UBE3A-204ENST00000438097 UBR5O95071 2799 aaPredicted RBP8.44□□□□□ -1.06
UBE3A-204ENST00000438097 LCE6AA0A183 80 aa8.42□□□□□ -1.06
UBE3A-204ENST00000438097 PANO1I0J062 215 aa8.42□□□□□ -1.06
UBE3A-204ENST00000438097 ITPR1Q14643 2758 aa8.41□□□□□ -1.06
UBE3A-204ENST00000438097 DSPP15924 2871 aaKnown RBP8.4□□□□□ -1.06
UBE3A-204ENST00000438097 Q6ZR54 194 aa8.38□□□□□ -1.07
UBE3A-204ENST00000438097 RPS29P62273 56 aaKnown RBP8.38□□□□□ -1.07
UBE3A-204ENST00000438097 FRYLO94915 3013 aa8.37□□□□□ -1.07
UBE3A-204ENST00000438097 XIRP2A4UGR9 3374 aa8.35□□□□□ -1.07
UBE3A-204ENST00000438097 VPS13AQ96RL7 3174 aa8.32□□□□□ -1.08
UBE3A-204ENST00000438097 PRAC1Q96KF2 57 aa8.31□□□□□ -1.08
UBE3A-204ENST00000438097 WDFY4Q6ZS81 3184 aa8.3□□□□□ -1.08
UBE3A-204ENST00000438097 FRYQ5TBA9 3013 aa8.3□□□□□ -1.08
UBE3A-204ENST00000438097 FLNCQ14315 2725 aa8.29□□□□□ -1.08
UBE3A-204ENST00000438097 KRTAP26-1Q6PEX3 210 aa8.29□□□□□ -1.08
UBE3A-204ENST00000438097 KRTAP16-1A8MUX0 517 aa8.29□□□□□ -1.08
UBE3A-204ENST00000438097 TENM1Q9UKZ4 2725 aa8.28□□□□□ -1.08
UBE3A-204ENST00000438097 Q5XG85 94 aa8.27□□□□□ -1.08
UBE3A-204ENST00000438097 TRIOO75962 3097 aa8.26□□□□□ -1.09
UBE3A-204ENST00000438097 C20orf166-AS1Q96NR2 134 aa8.24□□□□□ -1.09
UBE3A-204ENST00000438097 CRYBG3Q68DQ2 2970 aa8.24□□□□□ -1.09
UBE3A-204ENST00000438097 Q8NDZ9 215 aa8.23□□□□□ -1.09
UBE3A-204ENST00000438097 KRTAP10-1P60331 282 aa8.23□□□□□ -1.09
UBE3A-204ENST00000438097 FREM2Q5SZK8 3169 aa8.22□□□□□ -1.09
UBE3A-204ENST00000438097 A8MUU9 505 aa8.21□□□□□ -1.09
UBE3A-204ENST00000438097 CHD7Q9P2D1 2997 aa8.21□□□□□ -1.09
UBE3A-204ENST00000438097 LRBAP50851 2863 aa8.21□□□□□ -1.1
UBE3A-204ENST00000438097 PRUNE2Q8WUY3 3088 aa8.2□□□□□ -1.1
UBE3A-204ENST00000438097 NF1P21359 2839 aa8.17□□□□□ -1.1
UBE3A-204ENST00000438097 HIVEP1P15822 2718 aa8.17□□□□□ -1.1
UBE3A-204ENST00000438097 CHD9Q3L8U1 2897 aa8.17□□□□□ -1.1
UBE3A-204ENST00000438097 KALRNO60229 2985 aa8.16□□□□□ -1.1
UBE3A-204ENST00000438097 SPATA8Q6RVD6 105 aa8.15□□□□□ -1.1
UBE3A-204ENST00000438097 KRTAP10-2P60368 255 aa8.15□□□□□ -1.1
UBE3A-204ENST00000438097 KRTAP1-5Q9BYS1 174 aa8.14□□□□□ -1.11
UBE3A-204ENST00000438097 TNP1P09430 55 aa8.12□□□□□ -1.11
UBE3A-204ENST00000438097 TENM3Q9P273 2699 aa8.11□□□□□ -1.11
UBE3A-204ENST00000438097 RANBP2P49792 3224 aaKnown RBP8.1□□□□□ -1.11
UBE3A-204ENST00000438097 CELSR3Q9NYQ7 3312 aa8.1□□□□□ -1.11
UBE3A-204ENST00000438097 USP34Q70CQ2 3546 aa8.09□□□□□ -1.11
UBE3A-204ENST00000438097 ASH1LQ9NR48 2969 aaKnown RBP8.07□□□□□ -1.12
UBE3A-204ENST00000438097 KRTAP25-1Q3LHN0 102 aa8.06□□□□□ -1.12
UBE3A-204ENST00000438097 KRTAP4-16G5E9R7 235 aaPredicted RBP8.06□□□□□ -1.12
UBE3A-204ENST00000438097 MKI67P46013 3256 aaKnown RBP8.04□□□□□ -1.12
UBE3A-204ENST00000438097 PP632Q6XCG6 107 aa8.04□□□□□ -1.12
UBE3A-204ENST00000438097 A0A087X002 238 aa8.03□□□□□ -1.12
UBE3A-204ENST00000438097 UNC80Q8N2C7 3258 aa8.03□□□□□ -1.12
UBE3A-204ENST00000438097 CYSTM1Q9H1C7 97 aa8□□□□□ -1.13
UBE3A-204ENST00000438097 KRTAP29-1A8MX34 341 aaPredicted RBP8□□□□□ -1.13
UBE3A-204ENST00000438097 TNRC18O15417 2968 aaPredicted RBP8□□□□□ -1.13
UBE3A-204ENST00000438097 CELSR2Q9HCU4 2923 aa7.99□□□□□ -1.13
UBE3A-204ENST00000438097 NIPBLQ6KC79 2804 aaeCLIP7.98□□□□□ -1.138e-8■■■■■ 41.9
UBE3A-204ENST00000438097 COL12A1Q99715 3063 aa7.97□□□□□ -1.13
UBE3A-204ENST00000438097 TACC2O95359 2948 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms