RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 Q8N377 158 aa11.09□□□□□ -0.63
HMGN1-206ENST00000431390 DEFB105AQ8NG35 78 aa11.09□□□□□ -0.63
HMGN1-206ENST00000431390 TEX49A0A1B0GTD5 131 aa11.08□□□□□ -0.64
HMGN1-206ENST00000431390 RPL37AP61513 92 aaKnown RBP11.07□□□□□ -0.64
HMGN1-206ENST00000431390 ZNF706Q9Y5V0 76 aaPredicted RBP11.06□□□□□ -0.64
HMGN1-206ENST00000431390 SPRR1BP22528 89 aa11.05□□□□□ -0.64
HMGN1-206ENST00000431390 LAMTOR3Q9UHA4 124 aa11.05□□□□□ -0.64
HMGN1-206ENST00000431390 JMJD7-PLA2G4BH0Y9G9 81 aa11.04□□□□□ -0.64
HMGN1-206ENST00000431390 OBSCN-AS1Q96MR7 158 aa11.04□□□□□ -0.64
HMGN1-206ENST00000431390 FAM229AH3BQW9 127 aa11.03□□□□□ -0.64
HMGN1-206ENST00000431390 NDUFV3P56181 108 aaKnown RBP11.03□□□□□ -0.64
HMGN1-206ENST00000431390 SPRR4Q96PI1 79 aa11.03□□□□□ -0.64
HMGN1-206ENST00000431390 SRRM2Q9UQ35 2752 aaKnown RBP11.02□□□□□ -0.65
HMGN1-206ENST00000431390 J3QL48 77 aa11.02□□□□□ -0.65
HMGN1-206ENST00000431390 GAGE2AQ6NT46 116 aa11.01□□□□□ -0.65
HMGN1-206ENST00000431390 SMIM29Q86T20 159 aa11□□□□□ -0.65
HMGN1-206ENST00000431390 LINC00483Q53H64 154 aa10.99□□□□□ -0.65
HMGN1-206ENST00000431390 RBM3P98179 157 aaKnown RBP10.99□□□□□ -0.65
HMGN1-206ENST00000431390 C3orf22Q8N5N4 141 aa10.98□□□□□ -0.65
HMGN1-206ENST00000431390 A0A1B0GV72 72 aa10.96□□□□□ -0.65
HMGN1-206ENST00000431390 KRTAP10-4P60372 401 aaPredicted RBP10.95□□□□□ -0.66
HMGN1-206ENST00000431390 C14orf132Q9NPU4 83 aa10.95□□□□□ -0.66
HMGN1-206ENST00000431390 F8WEM9 126 aa10.94□□□□□ -0.66
HMGN1-206ENST00000431390 SPINK6Q6UWN8 80 aa10.94□□□□□ -0.66
HMGN1-206ENST00000431390 DSCR8Q96T75 97 aa10.94□□□□□ -0.66
HMGN1-206ENST00000431390 LOC110117498A0A087WWA1 95 aa10.92□□□□□ -0.66
HMGN1-206ENST00000431390 TRBV7-4A0A0J9YYF1 115 aa10.92□□□□□ -0.66
HMGN1-206ENST00000431390 J3QR89 54 aa10.92□□□□□ -0.66
HMGN1-206ENST00000431390 PLA2G1BP04054 148 aaKnown RBP10.92□□□□□ -0.66
HMGN1-206ENST00000431390 IGLV8-61A0A075B6I0 122 aa10.91□□□□□ -0.66
HMGN1-206ENST00000431390 PDE6GP18545 87 aa10.91□□□□□ -0.66
HMGN1-206ENST00000431390 C21orf62-AS1Q17RA5 79 aa10.9□□□□□ -0.67
HMGN1-206ENST00000431390 KRTAP29-1A8MX34 341 aaPredicted RBP10.89□□□□□ -0.67
HMGN1-206ENST00000431390 K7ERU9 68 aa10.89□□□□□ -0.67
HMGN1-206ENST00000431390 Q6ZQT0 140 aa10.88□□□□□ -0.67
HMGN1-206ENST00000431390 CCKP06307 115 aa10.86□□□□□ -0.67
HMGN1-206ENST00000431390 FAM229BQ4G0N7 80 aa10.86□□□□□ -0.67
HMGN1-206ENST00000431390 ANAPC11Q9NYG5 84 aa10.86□□□□□ -0.67
HMGN1-206ENST00000431390 Q6JHZ5 121 aa10.86□□□□□ -0.67
HMGN1-206ENST00000431390 KRTAP1-4P0C5Y4 121 aa10.85□□□□□ -0.67
HMGN1-206ENST00000431390 HMCN2Q8NDA2 5059 aa10.83□□□□□ -0.68
HMGN1-206ENST00000431390 IGLV9-49A0A0B4J1Y8 123 aa10.83□□□□□ -0.68
HMGN1-206ENST00000431390 FAM240AA0A1B0GVK7 77 aa10.82□□□□□ -0.68
HMGN1-206ENST00000431390 C9orf153Q5TBE3 101 aa10.82□□□□□ -0.68
HMGN1-206ENST00000431390 IGFL1Q6UW32 110 aa10.82□□□□□ -0.68
HMGN1-206ENST00000431390 Q8NBF4 154 aa10.82□□□□□ -0.68
HMGN1-206ENST00000431390 UBR4Q5T4S7 5183 aa10.81□□□□□ -0.68
HMGN1-206ENST00000431390 ACYP1P07311 99 aa10.81□□□□□ -0.68
HMGN1-206ENST00000431390 MOBPQ13875 183 aa10.79□□□□□ -0.68
HMGN1-206ENST00000431390 LRP1Q07954 4544 aaKnown RBP10.79□□□□□ -0.68
HMGN1-206ENST00000431390 CRYGAP11844 174 aa10.78□□□□□ -0.68
HMGN1-206ENST00000431390 VPS25Q9BRG1 176 aa10.78□□□□□ -0.68
HMGN1-206ENST00000431390 A0A087X002 238 aa10.77□□□□□ -0.68
HMGN1-206ENST00000431390 A0A1W2PNM2 257 aa10.77□□□□□ -0.68
HMGN1-206ENST00000431390 A0A1B0GW54 56 aa10.77□□□□□ -0.69
HMGN1-206ENST00000431390 SSBP3-AS1Q7Z2R9 100 aa10.77□□□□□ -0.69
HMGN1-206ENST00000431390 KRTAP13-2Q52LG2 175 aa10.75□□□□□ -0.69
HMGN1-206ENST00000431390 A0A0G2JQZ4 141 aa10.74□□□□□ -0.69
HMGN1-206ENST00000431390 Q6Q795 121 aa10.74□□□□□ -0.69
HMGN1-206ENST00000431390 PKHD1L1Q86WI1 4243 aa10.74□□□□□ -0.69
HMGN1-206ENST00000431390 FAT3Q8TDW7 4589 aa10.74□□□□□ -0.69
HMGN1-206ENST00000431390 OXTP01178 125 aa10.7□□□□□ -0.7
HMGN1-206ENST00000431390 LINC00846Q9NV44 126 aa10.7□□□□□ -0.7
HMGN1-206ENST00000431390 TYMSOSQ8TAI1 123 aa10.68□□□□□ -0.7
HMGN1-206ENST00000431390 CD164Q04900 197 aa10.67□□□□□ -0.7
HMGN1-206ENST00000431390 PRR26Q8N8Z3 221 aa10.67□□□□□ -0.7
HMGN1-206ENST00000431390 CDIP1Q9H305 208 aa10.66□□□□□ -0.7
HMGN1-206ENST00000431390 TRBV7-7A0A0K0K1E9 115 aa10.65□□□□□ -0.71
HMGN1-206ENST00000431390 UBL5Q9BZL1 73 aa10.65□□□□□ -0.71
HMGN1-206ENST00000431390 A0A087WSZ3 146 aa10.64□□□□□ -0.71
HMGN1-206ENST00000431390 HRCT1Q6UXD1 115 aa10.61□□□□□ -0.71
HMGN1-206ENST00000431390 Q6ZVQ6 151 aa10.6□□□□□ -0.71
HMGN1-206ENST00000431390 NREPQ16612 68 aa10.6□□□□□ -0.71
HMGN1-206ENST00000431390 LINC00643Q86TS7 51 aa10.59□□□□□ -0.71
HMGN1-206ENST00000431390 SS18L2Q9UHA2 77 aa10.58□□□□□ -0.72
HMGN1-206ENST00000431390 C4orf48Q5BLP8 95 aa10.56□□□□□ -0.72
HMGN1-206ENST00000431390 SPAG11AQ6PDA7 123 aa10.56□□□□□ -0.72
HMGN1-206ENST00000431390 LINC00304Q8N9R0 145 aa10.56□□□□□ -0.72
HMGN1-206ENST00000431390 SPINK1P00995 79 aa10.54□□□□□ -0.72
HMGN1-206ENST00000431390 Q5XG85 94 aa10.53□□□□□ -0.72
HMGN1-206ENST00000431390 ATP5EP2Q5VTU8 51 aa10.52□□□□□ -0.72
HMGN1-206ENST00000431390 MT1HL1P0DM35 61 aa10.52□□□□□ -0.73
HMGN1-206ENST00000431390 KRTAP10-8P60410 259 aa10.52□□□□□ -0.73
HMGN1-206ENST00000431390 RPS29P62273 56 aaKnown RBP10.52□□□□□ -0.73
HMGN1-206ENST00000431390 LCE2DQ5TA82 110 aaPredicted RBP10.51□□□□□ -0.73
HMGN1-206ENST00000431390 LIMD2Q9BT23 127 aa10.51□□□□□ -0.73
HMGN1-206ENST00000431390 ASB16-AS1Q495Z4 193 aa10.5□□□□□ -0.73
HMGN1-206ENST00000431390 CXCL6P80162 114 aa10.49□□□□□ -0.73
HMGN1-206ENST00000431390 LINC00472Q9H8W2 130 aa10.49□□□□□ -0.73
HMGN1-206ENST00000431390 BPY2O14599 106 aa10.48□□□□□ -0.73
HMGN1-206ENST00000431390 MT-ATP8P03928 68 aa10.47□□□□□ -0.73
HMGN1-206ENST00000431390 SIGMAR1Q99720 223 aa10.47□□□□□ -0.73
HMGN1-206ENST00000431390 IGKV3D-7A0A0C4DH55 119 aa10.46□□□□□ -0.74
HMGN1-206ENST00000431390 Q96NJ1 140 aa10.46□□□□□ -0.74
HMGN1-206ENST00000431390 RNF213Q63HN8 5207 aa10.44□□□□□ -0.74
HMGN1-206ENST00000431390 J3KT08 172 aa10.43□□□□□ -0.74
HMGN1-206ENST00000431390 LRP2P98164 4655 aa10.42□□□□□ -0.74
HMGN1-206ENST00000431390 TNXBP22105 4242 aa10.41□□□□□ -0.74
HMGN1-206ENST00000431390 DEFB116Q30KQ4 102 aa10.41□□□□□ -0.74
HMGN1-206ENST00000431390 IMUPQ9GZP8 106 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms