RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 SPACA4Q8TDM5 124 aa7.45□□□□□ -1.22
PTCH1-208ENST00000430669 C1orf195Q5TG92 126 aa7.45□□□□□ -1.22
PTCH1-208ENST00000430669 CFAP47Q6ZTR5 3102 aa7.44□□□□□ -1.22
PTCH1-208ENST00000430669 SPAG11AQ6PDA7 123 aa7.44□□□□□ -1.22
PTCH1-208ENST00000430669 LOC101927531A0A1B0GV80 90 aa7.44□□□□□ -1.22
PTCH1-208ENST00000430669 C7orf65Q6ZTY9 151 aa7.44□□□□□ -1.22
PTCH1-208ENST00000430669 UBR5O95071 2799 aaPredicted RBP7.44□□□□□ -1.22
PTCH1-208ENST00000430669 ZANQ9Y493 2812 aa7.43□□□□□ -1.22
PTCH1-208ENST00000430669 IGLV5-48A0A075B6I7 105 aa7.43□□□□□ -1.22
PTCH1-208ENST00000430669 PMAIP1Q13794 54 aa7.43□□□□□ -1.22
PTCH1-208ENST00000430669 PCOTHQ58A44 107 aa7.43□□□□□ -1.22
PTCH1-208ENST00000430669 K7EQZ3 153 aa7.43□□□□□ -1.22
PTCH1-208ENST00000430669 IGKV2D-30A0A075B6S6 120 aa7.43□□□□□ -1.22
PTCH1-208ENST00000430669 IGKV2-30P06310 120 aa7.43□□□□□ -1.22
PTCH1-208ENST00000430669 PRR15Q8IV56 129 aa7.43□□□□□ -1.22
PTCH1-208ENST00000430669 NOTCH1P46531 2555 aa7.42□□□□□ -1.22
PTCH1-208ENST00000430669 MUC3AQ02505 3323 aa7.41□□□□□ -1.22
PTCH1-208ENST00000430669 NBEAL1Q6ZS30 2694 aa7.41□□□□□ -1.22
PTCH1-208ENST00000430669 ASH1LQ9NR48 2969 aaKnown RBP7.41□□□□□ -1.22
PTCH1-208ENST00000430669 KLKP1Q107X0 134 aa7.41□□□□□ -1.22
PTCH1-208ENST00000430669 IGLV7-43P04211 117 aa7.4□□□□□ -1.22
PTCH1-208ENST00000430669 MRPL34Q9BQ48 92 aaKnown RBP7.4□□□□□ -1.23
PTCH1-208ENST00000430669 A0A1W2PNN7 141 aa7.39□□□□□ -1.23
PTCH1-208ENST00000430669 SPRR4Q96PI1 79 aa7.39□□□□□ -1.23
PTCH1-208ENST00000430669 A0A1B0GVX0 72 aa7.38□□□□□ -1.23
PTCH1-208ENST00000430669 PSORS1C2Q9UIG4 136 aa7.38□□□□□ -1.23
PTCH1-208ENST00000430669 NBPF19A0A087WUL8 3843 aa7.37□□□□□ -1.23
PTCH1-208ENST00000430669 CD164Q04900 197 aa7.37□□□□□ -1.23
PTCH1-208ENST00000430669 ATP11AUNQ6ZP68 121 aa7.36□□□□□ -1.23
PTCH1-208ENST00000430669 DCHS2Q6V1P9 2916 aa7.36□□□□□ -1.23
PTCH1-208ENST00000430669 CASC10Q5T4H9 136 aa7.36□□□□□ -1.23
PTCH1-208ENST00000430669 CELSR2Q9HCU4 2923 aa7.35□□□□□ -1.23
PTCH1-208ENST00000430669 LINC00304Q8N9R0 145 aa7.35□□□□□ -1.23
PTCH1-208ENST00000430669 C8orf17Q9NRJ1 99 aa7.33□□□□□ -1.24
PTCH1-208ENST00000430669 Q96NJ1 140 aa7.32□□□□□ -1.24
PTCH1-208ENST00000430669 PSPHP1O15172 72 aa7.31□□□□□ -1.24
PTCH1-208ENST00000430669 NF1P21359 2839 aa7.31□□□□□ -1.24
PTCH1-208ENST00000430669 SPRR1AP35321 89 aa7.31□□□□□ -1.24
PTCH1-208ENST00000430669 HIVEP1P15822 2718 aa7.31□□□□□ -1.24
PTCH1-208ENST00000430669 SMG1Q96Q15 3661 aaKnown RBP7.3□□□□□ -1.24
PTCH1-208ENST00000430669 MXRA5Q9NR99 2828 aa7.29□□□□□ -1.24
PTCH1-208ENST00000430669 A0A1B0GU69 56 aa7.29□□□□□ -1.24
PTCH1-208ENST00000430669 FAM229BQ4G0N7 80 aa7.28□□□□□ -1.24
PTCH1-208ENST00000430669 SPANXA2-OT1Q8N9U9 137 aa7.28□□□□□ -1.24
PTCH1-208ENST00000430669 RELNP78509 3460 aa7.28□□□□□ -1.24
PTCH1-208ENST00000430669 A0A1W2PNM2 257 aa7.28□□□□□ -1.24
PTCH1-208ENST00000430669 PLAC8Q9NZF1 115 aa7.27□□□□□ -1.25
PTCH1-208ENST00000430669 FBN2P35556 2912 aa7.27□□□□□ -1.25
PTCH1-208ENST00000430669 KRTAP26-1Q6PEX3 210 aa7.25□□□□□ -1.25
PTCH1-208ENST00000430669 PRO0628Q9UI54 55 aa7.25□□□□□ -1.25
PTCH1-208ENST00000430669 NIPBLQ6KC79 2804 aaeCLIP7.24□□□□□ -1.25
PTCH1-208ENST00000430669 DCHS1Q96JQ0 3298 aa7.23□□□□□ -1.25
PTCH1-208ENST00000430669 H7BZZ5 65 aa7.23□□□□□ -1.25
PTCH1-208ENST00000430669 CYP4F30PQ9H0H9 118 aa7.22□□□□□ -1.25
PTCH1-208ENST00000430669 IGLV8-61A0A075B6I0 122 aa7.21□□□□□ -1.25
PTCH1-208ENST00000430669 COA5Q86WW8 74 aa7.2□□□□□ -1.26
PTCH1-208ENST00000430669 DSCR10P59022 87 aa7.2□□□□□ -1.26
PTCH1-208ENST00000430669 TNP2Q05952 138 aa7.19□□□□□ -1.26
PTCH1-208ENST00000430669 OCR1Q9BZK8 76 aa7.19□□□□□ -1.26
PTCH1-208ENST00000430669 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.19□□□□□ -1.26
PTCH1-208ENST00000430669 SPRR1BP22528 89 aa7.19□□□□□ -1.26
PTCH1-208ENST00000430669 STAB2Q8WWQ8 2551 aa7.19□□□□□ -1.26
PTCH1-208ENST00000430669 Q8NDZ9 215 aa7.18□□□□□ -1.26
PTCH1-208ENST00000430669 SPINT4Q6UDR6 99 aa7.17□□□□□ -1.26
PTCH1-208ENST00000430669 C4orf26Q17RF5 130 aa7.16□□□□□ -1.26
PTCH1-208ENST00000430669 RBM12B-AS1Q9P1G2 102 aa7.16□□□□□ -1.26
PTCH1-208ENST00000430669 CSMD1Q96PZ7 3565 aa7.14□□□□□ -1.27
PTCH1-208ENST00000430669 ANAPC11Q9NYG5 84 aa7.14□□□□□ -1.27
PTCH1-208ENST00000430669 A0A0G2JQZ4 141 aa7.13□□□□□ -1.27
PTCH1-208ENST00000430669 KRTAP1-5Q9BYS1 174 aa7.12□□□□□ -1.27
PTCH1-208ENST00000430669 LINC00483Q53H64 154 aa7.11□□□□□ -1.27
PTCH1-208ENST00000430669 M0R2T5 61 aa7.1□□□□□ -1.27
PTCH1-208ENST00000430669 A8MUN3 132 aa7.1□□□□□ -1.27
PTCH1-208ENST00000430669 CELSR1Q9NYQ6 3014 aa7.09□□□□□ -1.27
PTCH1-208ENST00000430669 SMR3BP02814 79 aaPredicted RBP7.09□□□□□ -1.28
PTCH1-208ENST00000430669 KRTAP4-16G5E9R7 235 aaPredicted RBP7.08□□□□□ -1.28
PTCH1-208ENST00000430669 CRIPTQ9P021 101 aa7.06□□□□□ -1.28
PTCH1-208ENST00000430669 UQCR11O14957 56 aa7.06□□□□□ -1.28
PTCH1-208ENST00000430669 LINC00472Q9H8W2 130 aa7.06□□□□□ -1.28
PTCH1-208ENST00000430669 C9orf92A6NGG3 77 aa7.05□□□□□ -1.28
PTCH1-208ENST00000430669 KRTAP21-3Q3LHN1 58 aa7.04□□□□□ -1.28
PTCH1-208ENST00000430669 DMBT1Q9UGM3 2413 aaPredicted RBP7.03□□□□□ -1.28
PTCH1-208ENST00000430669 Q6ZR54 194 aa7.03□□□□□ -1.28
PTCH1-208ENST00000430669 Q1T7F1 81 aa7.03□□□□□ -1.28
PTCH1-208ENST00000430669 IGLV7-46A0A075B6I9 117 aa7.03□□□□□ -1.28
PTCH1-208ENST00000430669 AKAP9Q99996 3911 aa7.02□□□□□ -1.29
PTCH1-208ENST00000430669 VPS13CQ709C8 3753 aa7.02□□□□□ -1.29
PTCH1-208ENST00000430669 LINC01554Q52M75 96 aa7.02□□□□□ -1.29
PTCH1-208ENST00000430669 MMP24-AS1A0A0U1RRL7 71 aa7.01□□□□□ -1.29
PTCH1-208ENST00000430669 SVEP1Q4LDE5 3571 aa7□□□□□ -1.29
PTCH1-208ENST00000430669 LCE6AA0A183 80 aa6.99□□□□□ -1.29
PTCH1-208ENST00000430669 PDZD2O15018 2839 aa6.98□□□□□ -1.29
PTCH1-208ENST00000430669 ZFHX3Q15911 3703 aa6.97□□□□□ -1.29
PTCH1-208ENST00000430669 TENM4Q6N022 2769 aa6.97□□□□□ -1.29
PTCH1-208ENST00000430669 MIR22HGQ0VDD5 57 aa6.95□□□□□ -1.3
PTCH1-208ENST00000430669 PRR26Q8N8Z3 221 aa6.95□□□□□ -1.3
PTCH1-208ENST00000430669 Q6ZRN7 208 aaPredicted RBP6.93□□□□□ -1.3
PTCH1-208ENST00000430669 ASB16-AS1Q495Z4 193 aa6.93□□□□□ -1.3
PTCH1-208ENST00000430669 ZCCHC13Q8WW36 166 aaKnown RBP6.92□□□□□ -1.3
PTCH1-208ENST00000430669 LUZP6Q538Z0 58 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms