RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 A0A1B0GU33 70 aa8.19□□□□□ -1.1
CDK12-201ENST00000430627 VPS13AQ96RL7 3174 aa8.18□□□□□ -1.1
CDK12-201ENST00000430627 SPEGQ15772 3267 aa8.18□□□□□ -1.1
CDK12-201ENST00000430627 KRTAP21-3Q3LHN1 58 aa8.17□□□□□ -1.1
CDK12-201ENST00000430627 MYO15AQ9UKN7 3530 aa8.12□□□□□ -1.11
CDK12-201ENST00000430627 FP248Q71RG6 208 aaPredicted RBP8.12□□□□□ -1.11
CDK12-201ENST00000430627 Q1T7F1 81 aa8.12□□□□□ -1.11
CDK12-201ENST00000430627 KLKP1Q107X0 134 aa8.09□□□□□ -1.11
CDK12-201ENST00000430627 ADM2Q7Z4H4 148 aa8.09□□□□□ -1.11
CDK12-201ENST00000430627 CHD9Q3L8U1 2897 aa8.09□□□□□ -1.11
CDK12-201ENST00000430627 USP9YO00507 2555 aaPredicted RBP8.08□□□□□ -1.12
CDK12-201ENST00000430627 MGAM2Q2M2H8 2515 aa8.08□□□□□ -1.12
CDK12-201ENST00000430627 CYP4F30PQ9H0H9 118 aa8.07□□□□□ -1.12
CDK12-201ENST00000430627 KLK9Q2XQG4 91 aa8.06□□□□□ -1.12
CDK12-201ENST00000430627 H7BZZ5 65 aa8.05□□□□□ -1.12
CDK12-201ENST00000430627 KRTAP1-5Q9BYS1 174 aa8.04□□□□□ -1.12
CDK12-201ENST00000430627 DMAC1Q96GE9 116 aa8.04□□□□□ -1.12
CDK12-201ENST00000430627 C20orf166-AS1Q96NR2 134 aa8.03□□□□□ -1.12
CDK12-201ENST00000430627 HELZ2Q9BYK8 2649 aaKnown RBP8.03□□□□□ -1.12
CDK12-201ENST00000430627 LAMA1P25391 3075 aa8.03□□□□□ -1.12
CDK12-201ENST00000430627 WDFY4Q6ZS81 3184 aa8.02□□□□□ -1.13
CDK12-201ENST00000430627 Q8N9P0 234 aaPredicted RBP7.99□□□□□ -1.13
CDK12-201ENST00000430627 PRO0628Q9UI54 55 aa7.99□□□□□ -1.13
CDK12-201ENST00000430627 USP34Q70CQ2 3546 aa7.98□□□□□ -1.13
CDK12-201ENST00000430627 SPTBN5Q9NRC6 3674 aaKnown RBP7.97□□□□□ -1.13
CDK12-201ENST00000430627 BAHCC1Q9P281 2608 aa7.97□□□□□ -1.13
CDK12-201ENST00000430627 Q5W150 140 aa7.93□□□□□ -1.14
CDK12-201ENST00000430627 USP24Q9UPU5 2620 aa7.93□□□□□ -1.14
CDK12-201ENST00000430627 KTN1-AS1Q86SY8 53 aa7.91□□□□□ -1.14
CDK12-201ENST00000430627 EYSQ5T1H1 3165 aa7.9□□□□□ -1.15
CDK12-201ENST00000430627 COL6A3P12111 3177 aa7.89□□□□□ -1.15
CDK12-201ENST00000430627 MGAQ8IWI9 3026 aa7.88□□□□□ -1.15
CDK12-201ENST00000430627 A0A1B0GVY2 172 aa7.87□□□□□ -1.15
CDK12-201ENST00000430627 FRYLO94915 3013 aa7.85□□□□□ -1.15
CDK12-201ENST00000430627 SPRR1BP22528 89 aa7.84□□□□□ -1.15
CDK12-201ENST00000430627 Q6ZR54 194 aa7.84□□□□□ -1.15
CDK12-201ENST00000430627 SPANXA2-OT1Q8N9U9 137 aa7.82□□□□□ -1.16
CDK12-201ENST00000430627 MMP24-AS1A0A0U1RRL7 71 aa7.82□□□□□ -1.16
CDK12-201ENST00000430627 TRANK1O15050 2925 aa7.82□□□□□ -1.16
CDK12-201ENST00000430627 CR1P17927 2039 aa7.82□□□□□ -1.16
CDK12-201ENST00000430627 FRYQ5TBA9 3013 aa7.81□□□□□ -1.16
CDK12-201ENST00000430627 CYSTM1Q9H1C7 97 aa7.81□□□□□ -1.16
CDK12-201ENST00000430627 WDFY3Q8IZQ1 3526 aa7.81□□□□□ -1.16
CDK12-201ENST00000430627 A0A087X002 238 aa7.81□□□□□ -1.16
CDK12-201ENST00000430627 NBEAQ8NFP9 2946 aa7.8□□□□□ -1.16
CDK12-201ENST00000430627 PANO1I0J062 215 aa7.8□□□□□ -1.16
CDK12-201ENST00000430627 A8MUU9 505 aa7.79□□□□□ -1.16
CDK12-201ENST00000430627 REV3LO60673 3130 aa7.78□□□□□ -1.16
CDK12-201ENST00000430627 A0A0A0MQY5 61 aa7.78□□□□□ -1.16
CDK12-201ENST00000430627 DSPP15924 2871 aaKnown RBP7.77□□□□□ -1.17
CDK12-201ENST00000430627 RPL37P61927 97 aaKnown RBP7.76□□□□□ -1.17
CDK12-201ENST00000430627 SPATA8Q6RVD6 105 aa7.73□□□□□ -1.17
CDK12-201ENST00000430627 SETXQ7Z333 2677 aaKnown RBP7.72□□□□□ -1.17
CDK12-201ENST00000430627 ATRQ13535 2644 aa7.71□□□□□ -1.17
CDK12-201ENST00000430627 BOD1L1Q8NFC6 3051 aa7.71□□□□□ -1.17
CDK12-201ENST00000430627 KRTAP10-8P60410 259 aa7.7□□□□□ -1.18
CDK12-201ENST00000430627 MAST4O15021 2626 aa7.69□□□□□ -1.18
CDK12-201ENST00000430627 CFAP47Q6ZTR5 3102 aa7.69□□□□□ -1.18
CDK12-201ENST00000430627 ITPR3Q14573 2671 aa7.68□□□□□ -1.18
CDK12-201ENST00000430627 KRTAP10-10P60014 251 aa7.67□□□□□ -1.18
CDK12-201ENST00000430627 ROMO1P60602 79 aa7.67□□□□□ -1.18
CDK12-201ENST00000430627 MAP1AP78559 2803 aaPredicted RBP7.66□□□□□ -1.18
CDK12-201ENST00000430627 KALRNO60229 2985 aa7.66□□□□□ -1.18
CDK12-201ENST00000430627 CFAP46Q8IYW2 2715 aa7.66□□□□□ -1.18
CDK12-201ENST00000430627 FLNAP21333 2647 aaKnown RBP7.65□□□□□ -1.18
CDK12-201ENST00000430627 Q8NDZ9 215 aa7.65□□□□□ -1.18
CDK12-201ENST00000430627 SPRR1AP35321 89 aa7.62□□□□□ -1.19
CDK12-201ENST00000430627 KRTAP26-1Q6PEX3 210 aa7.61□□□□□ -1.19
CDK12-201ENST00000430627 LINC00472Q9H8W2 130 aa7.6□□□□□ -1.19
CDK12-201ENST00000430627 FLG2Q5D862 2391 aaPredicted RBP7.6□□□□□ -1.19
CDK12-201ENST00000430627 AKAP13Q12802 2813 aa7.59□□□□□ -1.19
CDK12-201ENST00000430627 CENPEQ02224 2701 aa7.58□□□□□ -1.2
CDK12-201ENST00000430627 Q5XG85 94 aa7.58□□□□□ -1.2
CDK12-201ENST00000430627 ZFHX4Q86UP3 3567 aa7.57□□□□□ -1.2
CDK12-201ENST00000430627 STAB1Q9NY15 2570 aa7.57□□□□□ -1.2
CDK12-201ENST00000430627 Q75L30 129 aa7.56□□□□□ -1.2
CDK12-201ENST00000430627 OCR1Q9BZK8 76 aa7.55□□□□□ -1.2
CDK12-201ENST00000430627 LRBAP50851 2863 aa7.55□□□□□ -1.2
CDK12-201ENST00000430627 TNP1P09430 55 aa7.54□□□□□ -1.2
CDK12-201ENST00000430627 ASPMQ8IZT6 3477 aa7.54□□□□□ -1.2
CDK12-201ENST00000430627 TEP1Q99973 2627 aaKnown RBP7.52□□□□□ -1.21
CDK12-201ENST00000430627 PRAC1Q96KF2 57 aa7.5□□□□□ -1.21
CDK12-201ENST00000430627 ADGRG4Q8IZF6 3080 aa7.5□□□□□ -1.21
CDK12-201ENST00000430627 DCHS1Q96JQ0 3298 aa7.49□□□□□ -1.21
CDK12-201ENST00000430627 RPS29P62273 56 aaKnown RBP7.48□□□□□ -1.21
CDK12-201ENST00000430627 PRO2289Q9P1D8 64 aa7.47□□□□□ -1.21
CDK12-201ENST00000430627 P0C880 135 aa7.47□□□□□ -1.21
CDK12-201ENST00000430627 LINC01558Q9Y6Z2 57 aa7.45□□□□□ -1.22
CDK12-201ENST00000430627 CHD6Q8TD26 2715 aa7.45□□□□□ -1.22
CDK12-201ENST00000430627 Q6ZRN7 208 aaPredicted RBP7.44□□□□□ -1.22
CDK12-201ENST00000430627 TACC2O95359 2948 aa7.44□□□□□ -1.22
CDK12-201ENST00000430627 LOC400499M0QZD8 3231 aa7.43□□□□□ -1.22
CDK12-201ENST00000430627 KRTAP13-2Q52LG2 175 aa7.42□□□□□ -1.22
CDK12-201ENST00000430627 C10orf95Q9H7T3 257 aa7.42□□□□□ -1.22
CDK12-201ENST00000430627 DMXL2Q8TDJ6 3036 aa7.4□□□□□ -1.22
CDK12-201ENST00000430627 ATMQ13315 3056 aa7.4□□□□□ -1.22
CDK12-201ENST00000430627 NBEAL2Q6ZNJ1 2754 aa7.4□□□□□ -1.22
CDK12-201ENST00000430627 CSMD1Q96PZ7 3565 aa7.38□□□□□ -1.23
CDK12-201ENST00000430627 NOTCH2NLQ7Z3S9 236 aa7.38□□□□□ -1.23
CDK12-201ENST00000430627 DMDP11532 3685 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms