RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 LINC00575Q6W349 94 aa8.54□□□□□ -1.04
SGCE-204ENST00000428696 LINC00304Q8N9R0 145 aa8.53□□□□□ -1.04
SGCE-204ENST00000428696 TEX49A0A1B0GTD5 131 aa8.52□□□□□ -1.05
SGCE-204ENST00000428696 M0R143 59 aa8.52□□□□□ -1.05
SGCE-204ENST00000428696 SNCGO76070 127 aa8.52□□□□□ -1.05
SGCE-204ENST00000428696 LAMTOR3Q9UHA4 124 aa8.52□□□□□ -1.05
SGCE-204ENST00000428696 H0YGX0 51 aa8.51□□□□□ -1.05
SGCE-204ENST00000428696 Q8NBF4 154 aa8.51□□□□□ -1.05
SGCE-204ENST00000428696 BATFQ16520 125 aa8.5□□□□□ -1.05
SGCE-204ENST00000428696 Q6ZQY7 126 aa8.5□□□□□ -1.05
SGCE-204ENST00000428696 TRIAP1O43715 76 aa8.49□□□□□ -1.05
SGCE-204ENST00000428696 COX6CP09669 75 aa8.47□□□□□ -1.05
SGCE-204ENST00000428696 SCGB1C2P0DMR2 95 aa8.47□□□□□ -1.05
SGCE-204ENST00000428696 SPRR1BP22528 89 aa8.47□□□□□ -1.05
SGCE-204ENST00000428696 SSBP3-AS1Q7Z2R9 100 aa8.47□□□□□ -1.05
SGCE-204ENST00000428696 Q8N377 158 aa8.46□□□□□ -1.05
SGCE-204ENST00000428696 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.46□□□□□ -1.06
SGCE-204ENST00000428696 CLEC2BQ92478 149 aa8.46□□□□□ -1.06
SGCE-204ENST00000428696 FAM218AQ96MZ4 157 aa8.46□□□□□ -1.06
SGCE-204ENST00000428696 IGLV5-48A0A075B6I7 105 aa8.45□□□□□ -1.06
SGCE-204ENST00000428696 LINC01547P58512 204 aaPredicted RBP8.45□□□□□ -1.06
SGCE-204ENST00000428696 SPAG11AQ6PDA7 123 aa8.45□□□□□ -1.06
SGCE-204ENST00000428696 HRCT1Q6UXD1 115 aa8.45□□□□□ -1.06
SGCE-204ENST00000428696 PRR4Q16378 134 aa8.44□□□□□ -1.06
SGCE-204ENST00000428696 SNHG12Q9BXW3 62 aa8.44□□□□□ -1.06
SGCE-204ENST00000428696 F8WEM9 126 aa8.43□□□□□ -1.06
SGCE-204ENST00000428696 SMIM29Q86T20 159 aa8.42□□□□□ -1.06
SGCE-204ENST00000428696 NAA38Q9BRA0 125 aaKnown RBP8.42□□□□□ -1.06
SGCE-204ENST00000428696 DNAL4O96015 105 aa8.41□□□□□ -1.06
SGCE-204ENST00000428696 RETNLBQ9BQ08 111 aa8.41□□□□□ -1.06
SGCE-204ENST00000428696 FABP2P12104 132 aa8.4□□□□□ -1.06
SGCE-204ENST00000428696 A0A0G2JQZ4 141 aa8.39□□□□□ -1.07
SGCE-204ENST00000428696 SPINK1P00995 79 aa8.39□□□□□ -1.07
SGCE-204ENST00000428696 KRTAP19-1Q8IUB9 90 aa8.39□□□□□ -1.07
SGCE-204ENST00000428696 A0A1B0GX51 115 aa8.37□□□□□ -1.07
SGCE-204ENST00000428696 OCIAD2Q56VL3 154 aa8.37□□□□□ -1.07
SGCE-204ENST00000428696 PCP4L1A6NKN8 68 aa8.35□□□□□ -1.07
SGCE-204ENST00000428696 PPDPFLQ8WWR9 84 aa8.35□□□□□ -1.07
SGCE-204ENST00000428696 H3BUT2 72 aa8.34□□□□□ -1.07
SGCE-204ENST00000428696 ORMDL1Q9P0S3 153 aa8.34□□□□□ -1.07
SGCE-204ENST00000428696 A0A1B0GV72 72 aa8.33□□□□□ -1.08
SGCE-204ENST00000428696 NDUFV3P56181 108 aaKnown RBP8.33□□□□□ -1.08
SGCE-204ENST00000428696 HMCN2Q8NDA2 5059 aa8.31□□□□□ -1.08
SGCE-204ENST00000428696 H3BMG7 143 aa8.3□□□□□ -1.08
SGCE-204ENST00000428696 LST1O00453 97 aa8.3□□□□□ -1.08
SGCE-204ENST00000428696 Q6JHZ5 121 aa8.3□□□□□ -1.08
SGCE-204ENST00000428696 ATXN8Q156A1 80 aa8.29□□□□□ -1.08
SGCE-204ENST00000428696 IGLV7-46A0A075B6I9 117 aa8.29□□□□□ -1.08
SGCE-204ENST00000428696 TMEM256-PLSCR3K7ERE1 68 aa8.29□□□□□ -1.08
SGCE-204ENST00000428696 TRACP01848 142 aa8.29□□□□□ -1.08
SGCE-204ENST00000428696 IGFL1Q6UW32 110 aa8.29□□□□□ -1.08
SGCE-204ENST00000428696 LIMD2Q9BT23 127 aa8.29□□□□□ -1.08
SGCE-204ENST00000428696 H3BQ85 93 aa8.28□□□□□ -1.08
SGCE-204ENST00000428696 TCL1BO95988 128 aa8.28□□□□□ -1.08
SGCE-204ENST00000428696 LYRM7Q5U5X0 104 aa8.28□□□□□ -1.08
SGCE-204ENST00000428696 KRTAP4-7Q9BYR0 210 aa8.28□□□□□ -1.08
SGCE-204ENST00000428696 C9orf118A6NHY6 69 aa8.27□□□□□ -1.09
SGCE-204ENST00000428696 BAALC-AS2P0C853 105 aa8.27□□□□□ -1.09
SGCE-204ENST00000428696 RPS29P62273 56 aaKnown RBP8.27□□□□□ -1.09
SGCE-204ENST00000428696 CD164Q04900 197 aa8.27□□□□□ -1.09
SGCE-204ENST00000428696 IGLV8-61A0A075B6I0 122 aa8.26□□□□□ -1.09
SGCE-204ENST00000428696 TAX1BP3O14907 124 aa8.26□□□□□ -1.09
SGCE-204ENST00000428696 COL5A1-AS1Q5SY13 56 aa8.23□□□□□ -1.09
SGCE-204ENST00000428696 TRBV20-1A0A075B6N2 111 aa8.22□□□□□ -1.09
SGCE-204ENST00000428696 ANKRD29Q8N6D5 301 aa8.22□□□□□ -1.09
SGCE-204ENST00000428696 A0A1W2PPM0 123 aa8.21□□□□□ -1.09
SGCE-204ENST00000428696 UBE2V1Q13404 147 aa8.21□□□□□ -1.09
SGCE-204ENST00000428696 FP248Q71RG6 208 aaPredicted RBP8.21□□□□□ -1.09
SGCE-204ENST00000428696 LPAP08519 4548 aa8.2□□□□□ -1.1
SGCE-204ENST00000428696 TRBV7-7A0A0K0K1E9 115 aa8.2□□□□□ -1.1
SGCE-204ENST00000428696 C9JAW5 83 aa8.2□□□□□ -1.1
SGCE-204ENST00000428696 CDIP1Q9H305 208 aa8.2□□□□□ -1.1
SGCE-204ENST00000428696 RBM3P98179 157 aaKnown RBP8.17□□□□□ -1.1
SGCE-204ENST00000428696 LCE1DQ5T752 114 aa8.17□□□□□ -1.1
SGCE-204ENST00000428696 TEN1Q86WV5 123 aa8.17□□□□□ -1.1
SGCE-204ENST00000428696 VPS25Q9BRG1 176 aa8.17□□□□□ -1.1
SGCE-204ENST00000428696 DSCR8Q96T75 97 aa8.16□□□□□ -1.1
SGCE-204ENST00000428696 C1orf195Q5TG92 126 aa8.15□□□□□ -1.1
SGCE-204ENST00000428696 MTURNQ8N3F0 131 aa8.15□□□□□ -1.1
SGCE-204ENST00000428696 SPCS1Q9Y6A9 102 aa8.15□□□□□ -1.1
SGCE-204ENST00000428696 LRP2P98164 4655 aa8.15□□□□□ -1.11
SGCE-204ENST00000428696 A0A087WSZ3 146 aa8.14□□□□□ -1.11
SGCE-204ENST00000428696 Q5XG85 94 aa8.14□□□□□ -1.11
SGCE-204ENST00000428696 A0A1W2PNM2 257 aa8.13□□□□□ -1.11
SGCE-204ENST00000428696 CCKP06307 115 aa8.13□□□□□ -1.11
SGCE-204ENST00000428696 TPRXLQ17RH7 258 aa8.13□□□□□ -1.11
SGCE-204ENST00000428696 UBR4Q5T4S7 5183 aa8.13□□□□□ -1.11
SGCE-204ENST00000428696 Q6Q795 121 aa8.12□□□□□ -1.11
SGCE-204ENST00000428696 SS18L2Q9UHA2 77 aa8.12□□□□□ -1.11
SGCE-204ENST00000428696 C9orf92A6NGG3 77 aa8.11□□□□□ -1.11
SGCE-204ENST00000428696 JMJD7-PLA2G4BH0Y9G9 81 aa8.1□□□□□ -1.11
SGCE-204ENST00000428696 KRTAP13-3Q3SY46 172 aa8.1□□□□□ -1.11
SGCE-204ENST00000428696 TRBV7-4A0A0J9YYF1 115 aa8.09□□□□□ -1.11
SGCE-204ENST00000428696 ASB16-AS1Q495Z4 193 aa8.07□□□□□ -1.12
SGCE-204ENST00000428696 C14orf132Q9NPU4 83 aa8.06□□□□□ -1.12
SGCE-204ENST00000428696 H3BT86 120 aa8.05□□□□□ -1.12
SGCE-204ENST00000428696 K7EP34 96 aa8.03□□□□□ -1.12
SGCE-204ENST00000428696 DEFB116Q30KQ4 102 aa8.03□□□□□ -1.12
SGCE-204ENST00000428696 PDE6GP18545 87 aa8.02□□□□□ -1.13
SGCE-204ENST00000428696 Q6ZQT0 140 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms