RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 F8WEM9 126 aa8.69□□□□□ -1.02
VARS-216ENST00000428445 Q6JHZ5 121 aa8.68□□□□□ -1.02
VARS-216ENST00000428445 PCP2Q8IVA1 136 aa8.68□□□□□ -1.02
VARS-216ENST00000428445 Q6Q795 121 aa8.66□□□□□ -1.02
VARS-216ENST00000428445 LINC00575Q6W349 94 aa8.66□□□□□ -1.02
VARS-216ENST00000428445 hADV29S1A0JD25 119 aa8.64□□□□□ -1.03
VARS-216ENST00000428445 ATOH7Q8N100 152 aa8.63□□□□□ -1.03
VARS-216ENST00000428445 PPDPFLQ8WWR9 84 aa8.62□□□□□ -1.03
VARS-216ENST00000428445 CLEC2BQ92478 149 aa8.62□□□□□ -1.03
VARS-216ENST00000428445 OCIAD2Q56VL3 154 aa8.61□□□□□ -1.03
VARS-216ENST00000428445 TRBV7-7A0A0K0K1E9 115 aa8.6□□□□□ -1.03
VARS-216ENST00000428445 Q6ZQY7 126 aa8.6□□□□□ -1.03
VARS-216ENST00000428445 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.59□□□□□ -1.03
VARS-216ENST00000428445 ATP11AUNQ6ZP68 121 aa8.59□□□□□ -1.03
VARS-216ENST00000428445 IGFL1Q6UW32 110 aa8.58□□□□□ -1.04
VARS-216ENST00000428445 Q75L30 129 aa8.58□□□□□ -1.04
VARS-216ENST00000428445 OBSCN-AS1Q96MR7 158 aa8.58□□□□□ -1.04
VARS-216ENST00000428445 HSBP1L1C9JCN9 74 aa8.57□□□□□ -1.04
VARS-216ENST00000428445 SCGB1D1O95968 90 aa8.57□□□□□ -1.04
VARS-216ENST00000428445 BVES-AS1Q5T3Y7 98 aa8.56□□□□□ -1.04
VARS-216ENST00000428445 USH2AO75445 5202 aa8.55□□□□□ -1.04
VARS-216ENST00000428445 SNHG12Q9BXW3 62 aa8.55□□□□□ -1.04
VARS-216ENST00000428445 SSPOA2VEC9 5147 aa8.54□□□□□ -1.04
VARS-216ENST00000428445 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.54□□□□□ -1.04
VARS-216ENST00000428445 LST1O00453 97 aa8.53□□□□□ -1.04
VARS-216ENST00000428445 KRTAP9-7A8MTY7 169 aa8.52□□□□□ -1.05
VARS-216ENST00000428445 KRTAP9-8Q9BYQ0 159 aa8.52□□□□□ -1.05
VARS-216ENST00000428445 SNCGO76070 127 aa8.51□□□□□ -1.05
VARS-216ENST00000428445 S100A2P29034 98 aa8.5□□□□□ -1.05
VARS-216ENST00000428445 SS18L2Q9UHA2 77 aa8.5□□□□□ -1.05
VARS-216ENST00000428445 Q96NJ1 140 aa8.49□□□□□ -1.05
VARS-216ENST00000428445 HIST1H2BLQ99880 126 aa8.49□□□□□ -1.05
VARS-216ENST00000428445 HIST3H2BBQ8N257 126 aa8.48□□□□□ -1.05
VARS-216ENST00000428445 HIST1H4GQ99525 98 aa8.47□□□□□ -1.05
VARS-216ENST00000428445 C12orf57Q99622 126 aa8.47□□□□□ -1.05
VARS-216ENST00000428445 TEN1Q86WV5 123 aa8.46□□□□□ -1.06
VARS-216ENST00000428445 H0YGX0 51 aa8.45□□□□□ -1.06
VARS-216ENST00000428445 H3BUT2 72 aa8.45□□□□□ -1.06
VARS-216ENST00000428445 C20orf166-AS1Q96NR2 134 aa8.45□□□□□ -1.06
VARS-216ENST00000428445 GHRHP01286 108 aa8.44□□□□□ -1.06
VARS-216ENST00000428445 A8MUU9 505 aa8.42□□□□□ -1.06
VARS-216ENST00000428445 DLEU1O43261 78 aa8.42□□□□□ -1.06
VARS-216ENST00000428445 COX8AP10176 69 aa8.41□□□□□ -1.06
VARS-216ENST00000428445 TRBV20-1A0A075B6N2 111 aa8.4□□□□□ -1.06
VARS-216ENST00000428445 S100A6P06703 90 aa8.4□□□□□ -1.06
VARS-216ENST00000428445 CFC1P0CG37 223 aa8.4□□□□□ -1.06
VARS-216ENST00000428445 NDUFV3P56181 108 aaKnown RBP8.4□□□□□ -1.06
VARS-216ENST00000428445 A0A1B0GX51 115 aa8.38□□□□□ -1.07
VARS-216ENST00000428445 RAB37Q96AX2 223 aa8.38□□□□□ -1.07
VARS-216ENST00000428445 FCGBPQ9Y6R7 5405 aaPredicted RBP8.37□□□□□ -1.07
VARS-216ENST00000428445 A0A0B4J2C4 111 aa8.36□□□□□ -1.07
VARS-216ENST00000428445 MT2AP02795 61 aa8.36□□□□□ -1.07
VARS-216ENST00000428445 KRTAP16-1A8MUX0 517 aa8.35□□□□□ -1.07
VARS-216ENST00000428445 HIGD1BQ9P298 99 aa8.35□□□□□ -1.07
VARS-216ENST00000428445 A0A087WSZ3 146 aa8.34□□□□□ -1.07
VARS-216ENST00000428445 H3BMG7 143 aa8.34□□□□□ -1.07
VARS-216ENST00000428445 DSCR10P59022 87 aa8.34□□□□□ -1.07
VARS-216ENST00000428445 LCE2BO14633 110 aa8.33□□□□□ -1.08
VARS-216ENST00000428445 MT1FP04733 61 aa8.31□□□□□ -1.08
VARS-216ENST00000428445 KRTAP19-1Q8IUB9 90 aa8.31□□□□□ -1.08
VARS-216ENST00000428445 FAM218AQ96MZ4 157 aa8.31□□□□□ -1.08
VARS-216ENST00000428445 H3BQ85 93 aa8.3□□□□□ -1.08
VARS-216ENST00000428445 FABP2P12104 132 aa8.29□□□□□ -1.08
VARS-216ENST00000428445 LINC00313P59037 77 aa8.29□□□□□ -1.08
VARS-216ENST00000428445 S100A1P23297 94 aa8.28□□□□□ -1.08
VARS-216ENST00000428445 C14orf144Q96I85 54 aa8.28□□□□□ -1.08
VARS-216ENST00000428445 PRO1854Q9UHT4 67 aa8.28□□□□□ -1.08
VARS-216ENST00000428445 TRBV7-4A0A0J9YYF1 115 aa8.27□□□□□ -1.09
VARS-216ENST00000428445 FAM236DA0A1B0GTK5 79 aa8.27□□□□□ -1.09
VARS-216ENST00000428445 TMEM238LA0A1B0GVL6 79 aa8.27□□□□□ -1.09
VARS-216ENST00000428445 A6NJY4 79 aa8.27□□□□□ -1.09
VARS-216ENST00000428445 FAM236CP0DP71 79 aa8.27□□□□□ -1.09
VARS-216ENST00000428445 A0A1W2PNM2 257 aa8.26□□□□□ -1.09
VARS-216ENST00000428445 CEND1Q8N111 149 aa8.25□□□□□ -1.09
VARS-216ENST00000428445 KRTAP9-3Q9BYQ3 159 aa8.25□□□□□ -1.09
VARS-216ENST00000428445 KRTAP10-10P60014 251 aa8.24□□□□□ -1.09
VARS-216ENST00000428445 ANKRD29Q8N6D5 301 aa8.24□□□□□ -1.09
VARS-216ENST00000428445 SPATA45Q537H7 98 aa8.23□□□□□ -1.09
VARS-216ENST00000428445 NOTCH2NLQ7Z3S9 236 aa8.23□□□□□ -1.09
VARS-216ENST00000428445 SIGMAR1Q99720 223 aa8.23□□□□□ -1.09
VARS-216ENST00000428445 IGKV4-1P06312 121 aa8.22□□□□□ -1.09
VARS-216ENST00000428445 C2orf91Q6ZV80 131 aa8.22□□□□□ -1.09
VARS-216ENST00000428445 RBM12B-AS1Q9P1G2 102 aa8.22□□□□□ -1.09
VARS-216ENST00000428445 PAM16Q9Y3D7 125 aa8.22□□□□□ -1.09
VARS-216ENST00000428445 TMEM256-PLSCR3K7ERE1 68 aa8.21□□□□□ -1.1
VARS-216ENST00000428445 HRES1P13985 223 aa8.21□□□□□ -1.1
VARS-216ENST00000428445 SYNE2Q8WXH0 6885 aaKnown RBP8.2□□□□□ -1.1
VARS-216ENST00000428445 DNAL4O96015 105 aa8.2□□□□□ -1.1
VARS-216ENST00000428445 MPLKIPQ8TAP9 179 aa8.2□□□□□ -1.1
VARS-216ENST00000428445 ORMDL1Q9P0S3 153 aa8.2□□□□□ -1.1
VARS-216ENST00000428445 VAMP8Q9BV40 100 aa8.19□□□□□ -1.1
VARS-216ENST00000428445 MACF1Q9UPN3 7388 aaKnown RBP8.18□□□□□ -1.1
VARS-216ENST00000428445 TRIAP1O43715 76 aa8.18□□□□□ -1.1
VARS-216ENST00000428445 DEFB116Q30KQ4 102 aa8.18□□□□□ -1.1
VARS-216ENST00000428445 LINC00472Q9H8W2 130 aa8.18□□□□□ -1.1
VARS-216ENST00000428445 A0A1B0GV72 72 aa8.16□□□□□ -1.1
VARS-216ENST00000428445 COX6CP09669 75 aa8.16□□□□□ -1.1
VARS-216ENST00000428445 FXYD2P54710 66 aa8.14□□□□□ -1.11
VARS-216ENST00000428445 TRACP01848 142 aa8.13□□□□□ -1.11
VARS-216ENST00000428445 CCKP06307 115 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 1167.6 ms