RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 KRTAP1-1Q07627 177 aa6.83□□□□□ -1.32
POLR2J4-202ENST00000427076 SEC61BP60468 96 aaKnown RBP6.82□□□□□ -1.32
POLR2J4-202ENST00000427076 PLAC8Q9NZF1 115 aa6.81□□□□□ -1.32
POLR2J4-202ENST00000427076 GOLGB1Q14789 3259 aaKnown RBP6.8□□□□□ -1.32
POLR2J4-202ENST00000427076 FASNP49327 2511 aaKnown RBP6.8□□□□□ -1.32
POLR2J4-202ENST00000427076 KRTAP26-1Q6PEX3 210 aa6.8□□□□□ -1.32
POLR2J4-202ENST00000427076 C10orf95Q9H7T3 257 aa6.79□□□□□ -1.32
POLR2J4-202ENST00000427076 UTRNP46939 3433 aa6.77□□□□□ -1.33
POLR2J4-202ENST00000427076 Q6ZR54 194 aa6.76□□□□□ -1.33
POLR2J4-202ENST00000427076 USP24Q9UPU5 2620 aa6.73□□□□□ -1.33
POLR2J4-202ENST00000427076 SPRR1AP35321 89 aa6.72□□□□□ -1.33
POLR2J4-202ENST00000427076 PCNTO95613 3336 aa6.72□□□□□ -1.33
POLR2J4-202ENST00000427076 A8MUU9 505 aa6.67□□□□□ -1.34
POLR2J4-202ENST00000427076 KRTAP10-1P60331 282 aa6.67□□□□□ -1.34
POLR2J4-202ENST00000427076 BPTFQ12830 3046 aa6.66□□□□□ -1.34
POLR2J4-202ENST00000427076 A0A087X002 238 aa6.66□□□□□ -1.34
POLR2J4-202ENST00000427076 NOTCH2NLQ7Z3S9 236 aa6.66□□□□□ -1.34
POLR2J4-202ENST00000427076 ASB16-AS1Q495Z4 193 aa6.66□□□□□ -1.34
POLR2J4-202ENST00000427076 PANO1I0J062 215 aa6.65□□□□□ -1.34
POLR2J4-202ENST00000427076 KRTAP10-2P60368 255 aa6.65□□□□□ -1.34
POLR2J4-202ENST00000427076 SPRR1BP22528 89 aa6.65□□□□□ -1.35
POLR2J4-202ENST00000427076 MGAM2Q2M2H8 2515 aa6.62□□□□□ -1.35
POLR2J4-202ENST00000427076 LCE6AA0A183 80 aa6.62□□□□□ -1.35
POLR2J4-202ENST00000427076 PRRC2CQ9Y520 2896 aaKnown RBP6.62□□□□□ -1.35
POLR2J4-202ENST00000427076 KRTAP1-5Q9BYS1 174 aa6.6□□□□□ -1.35
POLR2J4-202ENST00000427076 FLG2Q5D862 2391 aaPredicted RBP6.6□□□□□ -1.35
POLR2J4-202ENST00000427076 KRTAP29-1A8MX34 341 aaPredicted RBP6.54□□□□□ -1.36
POLR2J4-202ENST00000427076 KRTAP4-16G5E9R7 235 aaPredicted RBP6.53□□□□□ -1.36
POLR2J4-202ENST00000427076 EPG5Q9HCE0 2579 aa6.53□□□□□ -1.36
POLR2J4-202ENST00000427076 FLNBO75369 2602 aaKnown RBP6.51□□□□□ -1.37
POLR2J4-202ENST00000427076 HECTD1Q9ULT8 2610 aa6.51□□□□□ -1.37
POLR2J4-202ENST00000427076 ATRQ13535 2644 aa6.49□□□□□ -1.37
POLR2J4-202ENST00000427076 DNAH12Q6ZR08 3092 aa6.48□□□□□ -1.37
POLR2J4-202ENST00000427076 TNP1P09430 55 aa6.44□□□□□ -1.38
POLR2J4-202ENST00000427076 CEP350Q5VT06 3117 aa6.44□□□□□ -1.38
POLR2J4-202ENST00000427076 FREM2Q5SZK8 3169 aa6.43□□□□□ -1.38
POLR2J4-202ENST00000427076 KRTAP11-1Q8IUC1 163 aa6.43□□□□□ -1.38
POLR2J4-202ENST00000427076 C5orf42Q9H799 3197 aa6.42□□□□□ -1.38
POLR2J4-202ENST00000427076 MAST4O15021 2626 aa6.42□□□□□ -1.38
POLR2J4-202ENST00000427076 KRTAP10-8P60410 259 aa6.39□□□□□ -1.39
POLR2J4-202ENST00000427076 FLNAP21333 2647 aaKnown RBP6.36□□□□□ -1.39
POLR2J4-202ENST00000427076 DMBT1Q9UGM3 2413 aaPredicted RBP6.35□□□□□ -1.39
POLR2J4-202ENST00000427076 ITPR3Q14573 2671 aa6.33□□□□□ -1.4
POLR2J4-202ENST00000427076 A0A0C4DFX4 3053 aa6.32□□□□□ -1.4
POLR2J4-202ENST00000427076 AKAP13Q12802 2813 aa6.31□□□□□ -1.4
POLR2J4-202ENST00000427076 REV3LO60673 3130 aa6.29□□□□□ -1.4
POLR2J4-202ENST00000427076 XIRP2A4UGR9 3374 aa6.27□□□□□ -1.41
POLR2J4-202ENST00000427076 CFAP54Q96N23 3096 aa6.27□□□□□ -1.41
POLR2J4-202ENST00000427076 STAB1Q9NY15 2570 aa6.25□□□□□ -1.41
POLR2J4-202ENST00000427076 RANBP2P49792 3224 aaKnown RBP6.25□□□□□ -1.41
POLR2J4-202ENST00000427076 A0A1B0GVY2 172 aa6.25□□□□□ -1.41
POLR2J4-202ENST00000427076 KRTAP13-2Q52LG2 175 aa6.23□□□□□ -1.41
POLR2J4-202ENST00000427076 CHD6Q8TD26 2715 aa6.23□□□□□ -1.41
POLR2J4-202ENST00000427076 RPS29P62273 56 aaKnown RBP6.22□□□□□ -1.41
POLR2J4-202ENST00000427076 DNAH14Q0VDD8 3507 aa6.22□□□□□ -1.41
POLR2J4-202ENST00000427076 H0YAA0 97 aa6.22□□□□□ -1.41
POLR2J4-202ENST00000427076 CELSR3Q9NYQ7 3312 aa6.21□□□□□ -1.42
POLR2J4-202ENST00000427076 HELZ2Q9BYK8 2649 aaKnown RBP6.21□□□□□ -1.42
POLR2J4-202ENST00000427076 CFAP46Q8IYW2 2715 aa6.2□□□□□ -1.42
POLR2J4-202ENST00000427076 NBEAL1Q6ZS30 2694 aa6.2□□□□□ -1.42
POLR2J4-202ENST00000427076 MKI67P46013 3256 aaKnown RBP6.2□□□□□ -1.42
POLR2J4-202ENST00000427076 P0C880 135 aa6.19□□□□□ -1.42
POLR2J4-202ENST00000427076 CENPEQ02224 2701 aa6.18□□□□□ -1.42
POLR2J4-202ENST00000427076 KRTAP7-1Q8IUC3 87 aa6.18□□□□□ -1.42
POLR2J4-202ENST00000427076 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
POLR2J4-202ENST00000427076 TEX15Q9BXT5 2789 aa6.14□□□□□ -1.43
POLR2J4-202ENST00000427076 Q6ZRN7 208 aaPredicted RBP6.13□□□□□ -1.43
POLR2J4-202ENST00000427076 LAMA2P24043 3122 aaKnown RBP6.13□□□□□ -1.43
POLR2J4-202ENST00000427076 STAB2Q8WWQ8 2551 aa6.12□□□□□ -1.43
POLR2J4-202ENST00000427076 CHD7Q9P2D1 2997 aa6.09□□□□□ -1.43
POLR2J4-202ENST00000427076 NOTCH1P46531 2555 aa6.06□□□□□ -1.44
POLR2J4-202ENST00000427076 TEP1Q99973 2627 aaKnown RBP6.06□□□□□ -1.44
POLR2J4-202ENST00000427076 CDH23Q9H251 3354 aa6.06□□□□□ -1.44
POLR2J4-202ENST00000427076 GCN1Q92616 2671 aaKnown RBP6.05□□□□□ -1.44
POLR2J4-202ENST00000427076 SZT2Q5T011 3432 aa6.05□□□□□ -1.44
POLR2J4-202ENST00000427076 TRIOO75962 3097 aa6.05□□□□□ -1.44
POLR2J4-202ENST00000427076 UNC79Q9P2D8 2635 aa6.05□□□□□ -1.44
POLR2J4-202ENST00000427076 KRTAP13-1Q8IUC0 172 aa6.04□□□□□ -1.44
POLR2J4-202ENST00000427076 MGAQ8IWI9 3026 aa6.04□□□□□ -1.44
POLR2J4-202ENST00000427076 CHD9Q3L8U1 2897 aa6.02□□□□□ -1.45
POLR2J4-202ENST00000427076 SETXQ7Z333 2677 aaKnown RBP6.02□□□□□ -1.45
POLR2J4-202ENST00000427076 NBEAL2Q6ZNJ1 2754 aa5.99□□□□□ -1.45
POLR2J4-202ENST00000427076 HTTP42858 3142 aa5.98□□□□□ -1.45
POLR2J4-202ENST00000427076 KRTAP10-10P60014 251 aa5.97□□□□□ -1.45
POLR2J4-202ENST00000427076 COL6A5A8TX70 2615 aa5.97□□□□□ -1.45
POLR2J4-202ENST00000427076 VPS13AQ96RL7 3174 aa5.96□□□□□ -1.46
POLR2J4-202ENST00000427076 UNC80Q8N2C7 3258 aa5.96□□□□□ -1.46
POLR2J4-202ENST00000427076 WDFY4Q6ZS81 3184 aa5.94□□□□□ -1.46
POLR2J4-202ENST00000427076 XP32Q5T750 250 aa5.93□□□□□ -1.46
POLR2J4-202ENST00000427076 TRANK1O15050 2925 aa5.92□□□□□ -1.46
POLR2J4-202ENST00000427076 MAP1AP78559 2803 aaPredicted RBP5.92□□□□□ -1.46
POLR2J4-202ENST00000427076 BRCA2P51587 3418 aa5.92□□□□□ -1.46
POLR2J4-202ENST00000427076 LAMA3Q16787 3333 aa5.89□□□□□ -1.47
POLR2J4-202ENST00000427076 FRYQ5TBA9 3013 aa5.89□□□□□ -1.47
POLR2J4-202ENST00000427076 KRTAP12-2P59991 146 aa5.89□□□□□ -1.47
POLR2J4-202ENST00000427076 PRO2289Q9P1D8 64 aa5.89□□□□□ -1.47
POLR2J4-202ENST00000427076 DCHS1Q96JQ0 3298 aa5.86□□□□□ -1.47
POLR2J4-202ENST00000427076 TPRXLQ17RH7 258 aa5.84□□□□□ -1.47
POLR2J4-202ENST00000427076 ZNF292O60281 2723 aa5.84□□□□□ -1.47
POLR2J4-202ENST00000427076 COL6A3P12111 3177 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms