RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 TEP1Q99973 2627 aaKnown RBP4.87□□□□□ -1.63
CTNND1-207ENST00000426142 TEX15Q9BXT5 2789 aa4.87□□□□□ -1.63
CTNND1-207ENST00000426142 CHD6Q8TD26 2715 aa4.87□□□□□ -1.63
CTNND1-207ENST00000426142 OCR1Q9BZK8 76 aa4.86□□□□□ -1.63
CTNND1-207ENST00000426142 SPANXA2-OT1Q8N9U9 137 aa4.86□□□□□ -1.63
CTNND1-207ENST00000426142 CELSR3Q9NYQ7 3312 aa4.85□□□□□ -1.63
CTNND1-207ENST00000426142 DSPP15924 2871 aaKnown RBP4.85□□□□□ -1.63
CTNND1-207ENST00000426142 FAM229BQ4G0N7 80 aa4.84□□□□□ -1.63
CTNND1-207ENST00000426142 HRES1P13985 223 aa4.84□□□□□ -1.63
CTNND1-207ENST00000426142 KRTAP10-2P60368 255 aa4.83□□□□□ -1.64
CTNND1-207ENST00000426142 VPS13AQ96RL7 3174 aa4.83□□□□□ -1.64
CTNND1-207ENST00000426142 SZT2Q5T011 3432 aa4.82□□□□□ -1.64
CTNND1-207ENST00000426142 SPRR1AP35321 89 aa4.82□□□□□ -1.64
CTNND1-207ENST00000426142 KRTAP10-1P60331 282 aa4.82□□□□□ -1.64
CTNND1-207ENST00000426142 MMP24-AS1A0A0U1RRL7 71 aa4.82□□□□□ -1.64
CTNND1-207ENST00000426142 CDC42SE1Q9NRR8 79 aa4.82□□□□□ -1.64
CTNND1-207ENST00000426142 Q8N9P0 234 aaPredicted RBP4.81□□□□□ -1.64
CTNND1-207ENST00000426142 ZCCHC13Q8WW36 166 aaKnown RBP4.81□□□□□ -1.64
CTNND1-207ENST00000426142 DNAH14Q0VDD8 3507 aa4.8□□□□□ -1.64
CTNND1-207ENST00000426142 KRTAP26-1Q6PEX3 210 aa4.8□□□□□ -1.64
CTNND1-207ENST00000426142 MAP1AP78559 2803 aaPredicted RBP4.8□□□□□ -1.64
CTNND1-207ENST00000426142 LINC00483Q53H64 154 aa4.8□□□□□ -1.64
CTNND1-207ENST00000426142 PLAC4Q8WY50 150 aa4.8□□□□□ -1.64
CTNND1-207ENST00000426142 LCE6AA0A183 80 aa4.79□□□□□ -1.64
CTNND1-207ENST00000426142 SEC61BP60468 96 aaKnown RBP4.79□□□□□ -1.64
CTNND1-207ENST00000426142 FRYQ5TBA9 3013 aa4.78□□□□□ -1.65
CTNND1-207ENST00000426142 GCN1Q92616 2671 aaKnown RBP4.77□□□□□ -1.65
CTNND1-207ENST00000426142 IGSF10Q6WRI0 2623 aa4.77□□□□□ -1.65
CTNND1-207ENST00000426142 SETXQ7Z333 2677 aaKnown RBP4.77□□□□□ -1.65
CTNND1-207ENST00000426142 S4R3F8 94 aa4.77□□□□□ -1.65
CTNND1-207ENST00000426142 PANO1I0J062 215 aa4.77□□□□□ -1.65
CTNND1-207ENST00000426142 A0A1B0GU33 70 aa4.76□□□□□ -1.65
CTNND1-207ENST00000426142 COL6A5A8TX70 2615 aa4.76□□□□□ -1.65
CTNND1-207ENST00000426142 Q5W150 140 aa4.76□□□□□ -1.65
CTNND1-207ENST00000426142 STAB1Q9NY15 2570 aa4.76□□□□□ -1.65
CTNND1-207ENST00000426142 LINC00472Q9H8W2 130 aa4.76□□□□□ -1.65
CTNND1-207ENST00000426142 VCANP13611 3396 aa4.76□□□□□ -1.65
CTNND1-207ENST00000426142 SPRR1BP22528 89 aa4.75□□□□□ -1.65
CTNND1-207ENST00000426142 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
CTNND1-207ENST00000426142 LAMA1P25391 3075 aa4.74□□□□□ -1.65
CTNND1-207ENST00000426142 SPINK7P58062 85 aa4.74□□□□□ -1.65
CTNND1-207ENST00000426142 FREM2Q5SZK8 3169 aa4.73□□□□□ -1.65
CTNND1-207ENST00000426142 Q1T7F1 81 aa4.73□□□□□ -1.65
CTNND1-207ENST00000426142 CSAG1Q6PB30 78 aa4.73□□□□□ -1.65
CTNND1-207ENST00000426142 NBEAL1Q6ZS30 2694 aa4.73□□□□□ -1.65
CTNND1-207ENST00000426142 NBEAL2Q6ZNJ1 2754 aa4.72□□□□□ -1.65
CTNND1-207ENST00000426142 BAHCC1Q9P281 2608 aa4.72□□□□□ -1.65
CTNND1-207ENST00000426142 CYSTM1Q9H1C7 97 aa4.72□□□□□ -1.65
CTNND1-207ENST00000426142 UNC79Q9P2D8 2635 aa4.71□□□□□ -1.66
CTNND1-207ENST00000426142 NOTCH1P46531 2555 aa4.71□□□□□ -1.66
CTNND1-207ENST00000426142 COL6A3P12111 3177 aa4.71□□□□□ -1.66
CTNND1-207ENST00000426142 LCA10Q71F78 164 aa4.7□□□□□ -1.66
CTNND1-207ENST00000426142 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
CTNND1-207ENST00000426142 OXTP01178 125 aa4.68□□□□□ -1.66
CTNND1-207ENST00000426142 Q6ZR54 194 aa4.68□□□□□ -1.66
CTNND1-207ENST00000426142 A0A087X002 238 aa4.67□□□□□ -1.66
CTNND1-207ENST00000426142 Q75L30 129 aa4.67□□□□□ -1.66
CTNND1-207ENST00000426142 R4GN34 69 aa4.66□□□□□ -1.66
CTNND1-207ENST00000426142 BOD1L1Q8NFC6 3051 aa4.66□□□□□ -1.66
CTNND1-207ENST00000426142 UBR5O95071 2799 aaPredicted RBP4.66□□□□□ -1.66
CTNND1-207ENST00000426142 LINC01558Q9Y6Z2 57 aa4.66□□□□□ -1.66
CTNND1-207ENST00000426142 KALRNO60229 2985 aa4.65□□□□□ -1.66
CTNND1-207ENST00000426142 ATMQ13315 3056 aa4.65□□□□□ -1.66
CTNND1-207ENST00000426142 KRTAP4-16G5E9R7 235 aaPredicted RBP4.65□□□□□ -1.66
CTNND1-207ENST00000426142 SPTBN5Q9NRC6 3674 aaKnown RBP4.65□□□□□ -1.67
CTNND1-207ENST00000426142 DMAC1Q96GE9 116 aa4.65□□□□□ -1.67
CTNND1-207ENST00000426142 LRBAP50851 2863 aa4.64□□□□□ -1.67
CTNND1-207ENST00000426142 FRYLO94915 3013 aa4.64□□□□□ -1.67
CTNND1-207ENST00000426142 KRTAP11-1Q8IUC1 163 aa4.64□□□□□ -1.67
CTNND1-207ENST00000426142 ITPR2Q14571 2701 aa4.64□□□□□ -1.67
CTNND1-207ENST00000426142 TACC2O95359 2948 aa4.62□□□□□ -1.67
CTNND1-207ENST00000426142 FP248Q71RG6 208 aaPredicted RBP4.62□□□□□ -1.67
CTNND1-207ENST00000426142 ITPR1Q14643 2758 aa4.62□□□□□ -1.67
CTNND1-207ENST00000426142 COL12A1Q99715 3063 aa4.61□□□□□ -1.67
CTNND1-207ENST00000426142 Q5XG85 94 aa4.61□□□□□ -1.67
CTNND1-207ENST00000426142 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
CTNND1-207ENST00000426142 Q5VV11 94 aa4.6□□□□□ -1.67
CTNND1-207ENST00000426142 NOTCH2NLQ7Z3S9 236 aa4.6□□□□□ -1.67
CTNND1-207ENST00000426142 CFAP47Q6ZTR5 3102 aa4.59□□□□□ -1.67
CTNND1-207ENST00000426142 M0QZ58 72 aa4.59□□□□□ -1.67
CTNND1-207ENST00000426142 Q6ZRN7 208 aaPredicted RBP4.59□□□□□ -1.67
CTNND1-207ENST00000426142 DMXL2Q8TDJ6 3036 aa4.59□□□□□ -1.67
CTNND1-207ENST00000426142 ADGRG4Q8IZF6 3080 aa4.58□□□□□ -1.68
CTNND1-207ENST00000426142 REV3LO60673 3130 aa4.58□□□□□ -1.68
CTNND1-207ENST00000426142 ADM2Q7Z4H4 148 aa4.57□□□□□ -1.68
CTNND1-207ENST00000426142 KRTAP7-1Q8IUC3 87 aa4.57□□□□□ -1.68
CTNND1-207ENST00000426142 CRYBG3Q68DQ2 2970 aa4.56□□□□□ -1.68
CTNND1-207ENST00000426142 H1FX-AS1Q4G0G2 97 aa4.56□□□□□ -1.68
CTNND1-207ENST00000426142 FLNCQ14315 2725 aa4.56□□□□□ -1.68
CTNND1-207ENST00000426142 UTP20O75691 2785 aaKnown RBP4.56□□□□□ -1.68
CTNND1-207ENST00000426142 SPATA8Q6RVD6 105 aa4.55□□□□□ -1.68
CTNND1-207ENST00000426142 NBEAQ8NFP9 2946 aa4.55□□□□□ -1.68
CTNND1-207ENST00000426142 KRTAP29-1A8MX34 341 aaPredicted RBP4.55□□□□□ -1.68
CTNND1-207ENST00000426142 SPEGQ15772 3267 aa4.55□□□□□ -1.68
CTNND1-207ENST00000426142 USP34Q70CQ2 3546 aa4.55□□□□□ -1.68
CTNND1-207ENST00000426142 EYSQ5T1H1 3165 aa4.54□□□□□ -1.68
CTNND1-207ENST00000426142 TNRC18O15417 2968 aaPredicted RBP4.53□□□□□ -1.68
CTNND1-207ENST00000426142 FLG2Q5D862 2391 aaPredicted RBP4.53□□□□□ -1.68
CTNND1-207ENST00000426142 STAB2Q8WWQ8 2551 aa4.53□□□□□ -1.68
CTNND1-207ENST00000426142 RPL37P61927 97 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms